FC931885

Overview
NameFC931885
Unique NameFC931885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3238 contig Ccv1_Contig3238:82..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRPS (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain CGSP14) GN=aguA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.837e-46
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
            +P   GY MPAE+EPH    M WP RP +W      A+R F ++   I++ E V +    A    A+S L + +  +++  ND+W RDTGPTI+VN           K   +DW FN+WGG  DG Y+D+  D QVA +       P +     VLEGG+IH DG+GT L TE CLL+  RNP+L K +IEN L   LG  K+IWLP G++  D+TN H+DN+  F
Sbjct:    4 SPKKLGYHMPAEYEPHHGTLMIWPTRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY-QDETNEHVDNVVAF 220          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRPJ (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=aguA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.837e-46
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
            +P   GY MPAE+EPH    M WP RP +W      A+R F ++   I++ E V +    A    A+S L + +  +++  ND+W RDTGPTI+VN           K   +DW FN+WGG  DG Y+D+  D QVA +       P +     VLEGG+IH DG+GT L TE CLL+  RNP+L K +IEN L   LG  K+IWLP G++  D+TN H+DN+  F
Sbjct:    4 SPKKLGYHMPAEYEPHHGTLMIWPTRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY-QDETNEHVDNVVAF 220          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRZT (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=aguA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
            +P   GY MPAE+EPH    M WP RP +W      A+R F ++   I++ E V +    A    A+S L + +  +++  ND+W RDTGPTI+VN           K   +DW FN+WGG  DG Y+D+  D QVA +       P +     VLEGG+IH DG+GT L TE CLL+  RNP+L K +IEN L   LG  K+IWLP G++  D+TN H+DN+  F
Sbjct:    4 SPKKLGYHMPAEYEPHHGTLMIWPTRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLYEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEVLEKPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY-QDETNEHVDNVAAF 220          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRZP (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain P1031) GN=aguA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
            +P   GY MPAE+EPH    M WP RP +W      A+R F ++   I++ E V +    A    A+S L + +  +++  ND+W RDTGPTI+VN           K   +DW FN+WGG  DG Y+D+  D QVA +       P +     VLEGG+IH DG+GT L TE CLL+  RNP+L K +IEN L   LG  K+IWLP G++  D+TN H+DN+  F
Sbjct:    4 SPKKLGYHMPAEYEPHHGTLMIWPTRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALGRPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY-QDETNEHVDNVAAF 220          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRR6 (Putative agmatine deiminase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=aguA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
            +P   GY MPAE+EPH    M WP RP +W      A+R F ++   I++ E V +    A    A+S L + +  +++  ND+W RDTGPTI+VN           K   +DW FN+WGG  DG Y+D+  D QVA +       P +     VLEGG+IH DG+GT L TE CLL+  RNP+L K +IEN L   LG  K+IWLP G++  D+TN H+DN+  F
Sbjct:    4 SPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY-QDETNEHVDNVVAF 220          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRP2 (Putative agmatine deiminase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=aguA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
            +P   GY MPAE+EPH    M WP RP +W      A+R F ++   I++ E V +    A    A+S L + +  +++  ND+W RDTGPTI+VN           K   +DW FN+WGG  DG Y+D+  D QVA +       P +     VLEGG+IH DG+GT L TE CLL+  RNP+L K +IEN L   LG  K+IWLP G++  D+TN H+DN+  F
Sbjct:    4 SPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY-QDETNEHVDNVVAF 220          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_SELRU (Putative agmatine deiminase OS=Selenomonas ruminantium GN=aguA PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.936e-43
Identity = 95/230 (41.30%), Postives = 131/230 (56.96%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA---QWENARSQLPE-NIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCF 679
            TP   G+ MPAE+ PH+  ++ WP RP +W +     Q VF ++   IS  E + +    A   Q EN    LP+ +I  + +  +D+W RD GPT V++           +  GI+W FN+WGG  DG Y D+  D   A K+ +      +     VLEGGSIHVDGEGT + TE CLL++ RNP L+K QIE  L  YLG  K+IWLPRG+  +D+TN H+DN+  F
Sbjct:    7 TPKADGFYMPAEFSPHAGTFLIWPVRPGSWTNAGADVQPVFVELIREISAVEELYLLVDEAHRPQAENMLKDLPQQHIHYLAIPTDDAWARDMGPTYVIDGQG--------RRRGINWRFNAWGGDFDGLYPDYGQDDAAAEKMCAALGDELYDAGDFVLEGGSIHVDGEGTVVVTEACLLSQGRNPDLSKEQIEAMLLKYLGAEKVIWLPRGIH-NDETNEHVDNVFAF 227          

HSP 2 Score: 25.0238 bits (53), Expect = 2.936e-43
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  676 FFKPGVVLLSWTD 714
            F +PG VLL+WTD
Sbjct:  227 FVRPGEVLLAWTD 239          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRAW (Putative agmatine deiminase OS=Streptomyces avermitilis GN=aguA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 91/233 (39.06%), Postives = 120/233 (51.50%), Query Frame = 2
Query:    5 TPALHGYLMPAEWEPHSQCWMGWPERPDNWR--DDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGD-----DDTNGHIDNMCCFS 682
            TPA  G+ MPAEW PH + WM WP     +   DD   + R +A VA AI +FEPVTV     +   AR  L   I  +E  ++D+W RD GPT + +            +A +DW FN WG      +  W  D ++A  +        +   +V EGG+IHVDGEGT L TE   L   RNP   + Q+E E+ A+LG  K IWLPRGL GD       T GH+D +  F+
Sbjct:    3 TPAADGFRMPAEWTPHERTWMAWPGPNPTFDHPDDLAESCRAWADVARAIRRFEPVTVVCGPGRSAEARDLLGPGIDTVERDLDDAWMRDIGPTFLTDGKGG--------LAAVDWTFNGWGAQS---WARWEHDAKIAAYVGDLAGAKTYASKLVNEGGAIHVDGEGTVLLTETVQLGAERNPGWTREQVETEIHAHLGTSKAIWLPRGLTGDYPPHGFGTLGHVDIVAAFA 224          
BLAST of FC931885 vs. ExPASy Swiss-Prot
Match: AGUA_STRCO (Putative agmatine deiminase OS=Streptomyces coelicolor GN=aguA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 83/225 (36.89%), Postives = 117/225 (52.00%), Query Frame = 2
Query:   23 YLMPAEWEPHSQCWMGWPERPDNWRD--DALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNDSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDFQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLNKGQIENELKAYLGVMKIIWLPRGLFGD---DDTNGHIDNMCCFS 682
            + MP EW PH + WM WP     + D  +   A+  +A VA A+ +FEPVT+     Q   AR  L  ++ ++E  ++D+W RD GPT V +            +A +DW FN WG  D   +  W  D ++AR +      P     +V EGG+IHVDGEGT L T+   L   RNP  ++ ++E E+ A LG    IWLP GL GD     T GH+D +  F+
Sbjct:    3 FRMPPEWAPHERTWMAWPGPNATFTDAEELAGARAAWASVARAVRRFEPVTMVHGPGQAATARELLGPDVDLVERELDDAWMRDIGPTFVTDGRGG--------LAAVDWVFNGWGAQD---WARWEHDAEIARHVADLAAAPVLSSPLVNEGGAIHVDGEGTVLLTDTVQLGSGRNPGWSREEVEAEIHAKLGTTTAIWLPHGLAGDYGRYGTQGHVDIVAAFA 216          
The following BLAST results are available for this feature:
BLAST of FC931885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
AGUA_STRPS2.837e-4642.48Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRPJ2.837e-4642.48Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRZT3.705e-4642.48Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRZP3.705e-4642.48Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRR64.839e-4642.48Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_STRP24.839e-4642.48Putative agmatine deiminase OS=Streptococcus pneum... [more]
AGUA_SELRU2.936e-4341.30Putative agmatine deiminase OS=Selenomonas ruminan... [more]
AGUA_STRAW7.995e-4139.06Putative agmatine deiminase OS=Streptomyces avermi... [more]
AGUA_STRCO1.081e-3736.89Putative agmatine deiminase OS=Streptomyces coelic... [more]

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Properties
Property NameValue
Genbank descriptionC34202C03EF PostHarveN Citrus clementina cDNA clone C34202C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931885 ID=FC931885; Name=FC931885; organism=Citrus clementina; type=EST; length=714bp
GGGGACTCCGGCTCTTCATGGATACCTCATGCCTGCTGAGTGGGAGCCCC
ATTCACAGTGCTGGATGGGTTGGCCTGAACGTCCGGATAACTGGCGAGAT
GATGCCCTTCATGCTCAAAGGGTATTTGCCAAGGTAGCAACAGCTATTTC
AAAGTTTGAACCTGTGACTGTCTGTGCTAGTGCTGCTCAGTGGGAGAATG
CACGGAGTCAGCTACCCGAAAATATCAGGGTAATTGAGATGAGCATGAAT
GATTCCTGGTTTCGAGATACTGGGCCAACAATTGTTGTTAATAAAAGCAG
CGCAAGTTCAGGTGCTCAAGCACCAAAGGTTGCTGGAATTGATTGGAATT
TCAACAGTTGGGGAGGGGTTGATGATGGTTGTTACCGAGACTGGAGTCTT
GACTTCCAAGTGGCAAGGAAGATTTTGAGTACGGAGAGGCTTCCTAGATT
TCCACATTCTATGGTTCTCGAAGGGGGAAGCATCCATGTGGATGGAGAAG
GTACATGCTTAACTACAGAGGAGTGCCTCTTGAACAAAAACAGGAACCCA
CATTTGAACAAAGGACAAATAGAGAACGAACTTAAGGCATATCTTGGAGT
CATGAAGATTATATGGTTGCCTCGTGGATTATTTGGTGATGATGATACTA
ATGGCCATATTGACAATATGTGCTGTTTTTCAAGCCTGGTGTGGTGTTAC
TGTCTTGGACTGAT
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