FC931887
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHESH (Chaperone protein htpG OS=Shewanella sediminis (strain HAW-EB3) GN=htpG PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 9.902e-34 Identity = 56/121 (46.28%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIG 537
M + ET FQ E+ QLL+L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT+ + + EL +RI +K ++I D+G+GMT+ ++ +LGTIA+SGT +F + L D +IG
Sbjct: 1 MSQQETHGFQTEVKQLLNLMIHSLYSNKEIFLRELVSNAADASDKLRYEALTNDALYEGDGELRVRISTNKEKGTVTIEDNGIGMTRDTVIEHLGTIAKSGTADFFKNLSGDESKDSQLIG 121 HSP 2 Score: 52.373 bits (124), Expect = 9.902e-34 Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
+GQFGVGFYS+++VA+KV V T+ H DE WES G FTV
Sbjct: 120 IGQFGVGFYSSFIVADKVTVRTRAAGHGSDEGVQWESAGEGDFTV 164
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 9.903e-34 Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 190 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
+ET FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++ L EL IR+ DKA + ++I D+G+G+++ + + NLGTIARSGT+EF L D +IG
Sbjct: 7 SETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPELLAGDSELAIRVSYDKAARTITIADNGIGLSREEAIANLGTIARSGTREFFSQLTGDKQKDAQLIG 124 HSP 2 Score: 45.4394 bits (106), Expect = 9.903e-34 Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKV-IVTTKHNDDEQYVWESQAGGSFTV 658
+GQFGVGFYS+++VA++V +++ + DE WES G F++
Sbjct: 123 IGQFGVGFYSSFIVADRVSVLSRRAGSDEAIRWESDGQGEFSI 165
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.289e-33 Identity = 58/105 (55.24%), Postives = 83/105 (79.05%), Query Frame = 1
Query: 196 TFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQ 510
T FQ E+ QLL L+I++ YSN++IFLRELISNSSDA+DKIRFE+ +++ L+ + I+++PDK L+I+D+G+GMT A++ N+GTIARSGTK FM+AL+
Sbjct: 5 TKQFQTEVKQLLDLVIHSLYSNRDIFLRELISNSSDAIDKIRFEAHSNEELLEGNSDWKIKLIPDKDAGTLTILDNGIGMTMAEVEENIGTIARSGTKAFMQALK 109 HSP 2 Score: 42.743 bits (99), Expect = 1.289e-33 Identity = 19/44 (43.18%), Postives = 31/44 (70.45%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND--DEQYVWESQAGGSFTV 658
+GQFGVGFY++++VA++VI+ T+ + WES GS+T+
Sbjct: 120 IGQFGVGFYASFMVADRVILETRKGGTASDGCRWESIGDGSYTI 163
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.290e-33 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 190 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
+ET FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++ LD EL IR+ DKA + ++I D+G+G+++ + V NLGTIARSGT+EF L D +IG
Sbjct: 10 SETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQLTGDKQKDAQLIG 127 HSP 2 Score: 43.1282 bits (100), Expect = 1.290e-33 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFTV 658
+GQFGVGFYS+++VA+KV V ++ +E WES G F++
Sbjct: 126 IGQFGVGFYSSFIVADKVTVLSRRAGLAANEAIRWESDGQGEFSI 170
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.290e-33 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 190 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIG 537
+ET FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++ LD EL IR+ DKA + ++I D+G+G+++ + V NLGTIARSGT+EF L D +IG
Sbjct: 10 SETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLDGDGELAIRVDYDKAARTITISDNGIGLSRDEAVANLGTIARSGTREFFSQLTGDKQKDAQLIG 127 HSP 2 Score: 43.1282 bits (100), Expect = 1.290e-33 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFTV 658
+GQFGVGFYS+++VA+KV V ++ +E WES G F++
Sbjct: 126 IGQFGVGFYSSFIVADKVTVLSRRAGLAANEAIRWESDGQGEFSI 170
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.290e-33 Identity = 59/123 (47.97%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 175 VHMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
++M ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++ + EL +R+ DK + L++ D+G+GMT+ ++++NLGTIA+SGTK F+E++ D +IG
Sbjct: 1 MNMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPELFEGDGELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIG 123 HSP 2 Score: 45.8246 bits (107), Expect = 1.290e-33 Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFT---VTRDVSG 676
+GQFGVGFYSA++VA+KV V T+ D WES G +T +T+D G
Sbjct: 122 IGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDERG 175
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.290e-33 Identity = 59/123 (47.97%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 175 VHMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
++M ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++ + EL +R+ DK + L++ D+G+GMT+ ++++NLGTIA+SGTK F+E++ D +IG
Sbjct: 1 MNMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPELFEGDGELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIG 123 HSP 2 Score: 45.8246 bits (107), Expect = 1.290e-33 Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFT---VTRDVSG 676
+GQFGVGFYSA++VA+KV V T+ D WES G +T +T+D G
Sbjct: 122 IGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDERG 175
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.290e-33 Identity = 59/123 (47.97%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 175 VHMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
++M ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++ + EL +R+ DK + L++ D+G+GMT+ ++++NLGTIA+SGTK F+E++ D +IG
Sbjct: 1 MNMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPELFEGDGELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIG 123 HSP 2 Score: 45.8246 bits (107), Expect = 1.290e-33 Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFT---VTRDVSG 676
+GQFGVGFYSA++VA+KV V T+ D WES G +T +T+D G
Sbjct: 122 IGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDERG 175
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_YERPA (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=htpG PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.290e-33 Identity = 59/123 (47.97%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 175 VHMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
++M ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++ + EL +R+ DK + L++ D+G+GMT+ ++++NLGTIA+SGTK F+E++ D +IG
Sbjct: 1 MNMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPELFEGDGELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIG 123 HSP 2 Score: 45.8246 bits (107), Expect = 1.290e-33 Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKVIVTTKHND---DEQYVWESQAGGSFT---VTRDVSG 676
+GQFGVGFYSA++VA+KV V T+ D WES G +T +T+D G
Sbjct: 122 IGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDERG 175
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_RHORT (Chaperone protein htpG OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=htpG PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.290e-33 Identity = 59/120 (49.17%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQ-----AGADVSMIG 537
ET +FQAE+++LL +++++ YS+++IFLRELISN+SDA DK+R+E LT + L+ IR+ D L+I D+G+GM + +L+ NLGTIARSGT+ F EAL+ A DVS+IG
Sbjct: 4 ETLSFQAEVSKLLDIVVHSLYSDRKIFLRELISNASDACDKLRYEGLTQPALLEGDGAFRIRLSIDAEAGTLTIADNGIGMNRHELIENLGTIARSGTQAFAEALKAKSQAASGDVSLIG 123 HSP 2 Score: 48.1358 bits (113), Expect = 1.290e-33 Identity = 22/44 (50.00%), Postives = 33/44 (75.00%), Query Frame = 2
Query: 533 LGQFGVGFYSAYLVAEKV-IVTTKHNDDEQYVWESQAGGSFTVT 661
+GQFGVGFYSA++VA+KV +VT + + + + W S GSF+V+
Sbjct: 122 IGQFGVGFYSAFMVADKVEVVTRRAGEAQGWRWSSDGKGSFSVS 165 The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bpback to top |