FC931887

Overview
NameFC931887
Unique NameFC931887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.680e-33
Identity = 56/121 (46.28%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:  181 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIG 537
            M   ET  FQ E+ QLL+L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT     +   EL +R+  D     ++I D+G+GMT+  ++ +LGTIA+SGT EF + L      D  +IG
Sbjct:    1 MSHQETHGFQTEVKQLLNLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTKDELYEGDGELRVRVSADSEKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNLSGDESKDSQLIG 121

HSP 2 Score: 52.373 bits (124), Expect = 1.680e-33
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTV 658
            +GQFGVGFYSA++VA+KV V T+   H  DE   WES   G FTV
Sbjct:  120 IGQFGVGFYSAFIVADKVTVRTRAAGHAADEAVQWESAGEGEFTV 164
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRW (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Welgevonden) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.680e-33
Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = 1 
Query:  190 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGA 519
            +E   F AE+ ++L L+I++ Y+NK+IFLRELISN+SDA DK+R++SL+++  +DA  EL I I  DK    L I D+G+GM + DL+NNLGTIA SGT++F++A+ +GA
Sbjct:    7 SERLKFDAEVGKVLKLVIHSLYTNKDIFLRELISNASDACDKLRYQSLSNQDLMDAGSELKIVISVDKDKNRLYISDNGIGMNREDLINNLGTIAHSGTQKFLDAINSGA 116

HSP 2 Score: 44.669 bits (104), Expect = 1.680e-33
Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIV-TTKHNDDEQYVWESQAGGSFTVTR 664
            +G+FGVGFYSA++VA +VIV + K  +   Y W+S   G F +++
Sbjct:  126 IGKFGVGFYSAFMVASEVIVESCKAGESVGYQWKSSGDGEFVISQ 170
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRG (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Gardel) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.680e-33
Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = 1 
Query:  190 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGA 519
            +E   F AE+ ++L L+I++ Y+NK+IFLRELISN+SDA DK+R++SL+++  +DA  EL I I  DK    L I D+G+GM + DL+NNLGTIA SGT++F++A+ +GA
Sbjct:    7 SERLKFDAEVGKVLKLVIHSLYTNKDIFLRELISNASDACDKLRYQSLSNQDLMDAGSELKIVISVDKDKNRLYISDNGIGMNREDLINNLGTIAHSGTQKFLDAINSGA 116

HSP 2 Score: 44.669 bits (104), Expect = 1.680e-33
Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIV-TTKHNDDEQYVWESQAGGSFTVTR 664
            +G+FGVGFYSA++VA +VIV + K  +   Y W+S   G F +++
Sbjct:  126 IGKFGVGFYSAFMVASEVIVESCKAGESVGYQWKSSGDGEFVISQ 170
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_WOLPM (Chaperone protein htpG OS=Wolbachia pipientis wMel GN=htpG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.680e-33
Identity = 56/114 (49.12%), Postives = 83/114 (72.81%), Query Frame = 1 
Query:  187 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVS 528
            ETE   F AE+ ++L+++I++ Y+NK+IFLRELISN+SDA DK+R+ES  + + LD   EL I I  +K    L I D+G+GM + DL++NLGTIA SGT++F++A++   D S
Sbjct:   10 ETENLKFDAEVGKVLNIVIHSLYTNKDIFLRELISNASDACDKLRYESQLNPNLLDLSDELKITISSNKDKNELYITDNGIGMNRQDLIDNLGTIASSGTQKFLDAIKNSKDSS 123

HSP 2 Score: 48.521 bits (114), Expect = 1.680e-33
Identity = 19/51 (37.25%), Postives = 38/51 (74.51%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIV-TTKHNDDEQYVWESQAGGSFTVTRDVSGEP 682
            +G+FGVGFYS+++VA +VIV + K  ++E ++W+S+  G +++++  +  P
Sbjct:  129 IGKFGVGFYSSFMVASEVIVESRKAGEEESWIWQSKGDGEYSISKSDNQVP 179
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.680e-33
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = 1 
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL 507
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L+         +L +R+  DK  + L+I D+G+GM++ ++++NLGTIA+SGTK F+E++
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSTPELYAGDGDLRVRVSTDKEKRTLTISDNGIGMSRDEVIDNLGTIAKSGTKSFLESM 109

HSP 2 Score: 49.2914 bits (116), Expect = 1.680e-33
Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFT---VTRDVSG 676
            +GQFGVGFYSA++VA+KV V T+    N D+   WES   G +T   +T+D  G
Sbjct:  120 IGQFGVGFYSAFIVADKVTVRTRAAGANADQGVYWESAGEGDYTIADITKDDRG 173
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.680e-33
Identity = 60/117 (51.28%), Postives = 86/117 (73.50%), Query Frame = 1 
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL +R+  DK  + L+I D+GVGMT+ +++++LGTIA+SGTK F+E+L      D  +IG
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIG 121

HSP 2 Score: 46.2098 bits (108), Expect = 1.680e-33
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYSA++VA+KV V T+      +    WES   G +TV  D++ E
Sbjct:  120 IGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE 170
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.680e-33
Identity = 60/117 (51.28%), Postives = 86/117 (73.50%), Query Frame = 1 
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL +R+  DK  + L+I D+GVGMT+ +++++LGTIA+SGTK F+E+L      D  +IG
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIG 121

HSP 2 Score: 46.2098 bits (108), Expect = 1.680e-33
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYSA++VA+KV V T+      +    WES   G +TV  D++ E
Sbjct:  120 IGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE 170
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.680e-33
Identity = 60/117 (51.28%), Postives = 86/117 (73.50%), Query Frame = 1 
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL +R+  DK  + L+I D+GVGMT+ +++++LGTIA+SGTK F+E+L      D  +IG
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIG 121

HSP 2 Score: 46.2098 bits (108), Expect = 1.680e-33
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYSA++VA+KV V T+      +    WES   G +TV  D++ E
Sbjct:  120 IGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE 170
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.680e-33
Identity = 60/117 (51.28%), Postives = 86/117 (73.50%), Query Frame = 1 
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL +R+  DK  + L+I D+GVGMT+ +++++LGTIA+SGTK F+E+L      D  +IG
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIG 121

HSP 2 Score: 46.2098 bits (108), Expect = 1.680e-33
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYSA++VA+KV V T+      +    WES   G +TV  D++ E
Sbjct:  120 IGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE 170
[Close]
BLAST of FC931887 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.680e-33
Identity = 60/117 (51.28%), Postives = 86/117 (73.50%), Query Frame = 1 
Query:  193 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIRIVPDKANKALSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIG 537
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL +R+  DK  + L+I D+GVGMT+ +++++LGTIA+SGTK F+E+L      D  +IG
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIG 121

HSP 2 Score: 46.2098 bits (108), Expect = 1.680e-33
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 2 
Query:  533 LGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGE 679
            +GQFGVGFYSA++VA+KV V T+      +    WES   G +TV  D++ E
Sbjct:  120 IGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE 170
The following BLAST results are available for this feature:
BLAST of FC931887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
HTPG_SHELP1.680e-3346.28Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_EHRRW1.680e-3351.82Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_EHRRG1.680e-3351.82Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_WOLPM1.680e-3349.12Chaperone protein htpG OS=Wolbachia pipientis wMel... [more]
HTPG_ERWCT1.680e-3351.43Chaperone protein htpG OS=Erwinia carotovora subsp... [more]
HTPG_SHISS1.680e-3351.28Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL1.680e-3351.28Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIBS1.680e-3351.28Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_ECOUT1.680e-3351.28Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLI1.680e-3351.28Chaperone protein htpG OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34202C05EF PostHarveN Citrus clementina cDNA clone C34202C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931887 ID=FC931887; Name=FC931887; organism=Citrus clementina; type=EST; length=687bp
GATCGTCAAGTAGAAGCACTGTCTTGAGTTTTCCAATAGAAATCATCAAA
TCAGTTCGTACTCCTACTTCTTCAGCAAACAGCAAACGGCATTTGTATTC
GCTCGTTTTCGTTTTGCTCTGTTTCTTTTTGAACGTTTGGAGTTTTTGAG
TCTGGTCGGGAAACAATGGCTGACGTGCACATGGGAGAAACCGAGACCTT
CGCTTTTCAGGCTGAGATTAATCAGCTTTTAAGCTTGATCATCAATACTT
TTTACAGCAACAAAGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCT
GATGCGCTTGATAAGATCAGATTTGAGAGCTTAACCGACAAGAGCAAGCT
CGATGCTCAGCCAGAGCTTTTCATCAGAATTGTTCCTGACAAAGCCAACA
AGGCACTATCAATCATCGATAGCGGCGTTGGCATGACCAAAGCAGATTTG
GTGAATAACTTGGGAACAATTGCGAGGTCCGGAACAAAGGAGTTTATGGA
GGCATTACAGGCGGGTGCTGACGTAAGCATGATTGGGGCAGTTTGGTGTC
GGGTTCTACTCTGCTTATTTGGTGGCGGAGAAGGTTATTGTGACGACTAA
ACACAATGATGATGAACAATACGTTTGGGAGTCGCAGGCCGGTGGATCTT
TCACTGTTACTAGAGATGTTAGCGGTGAGCCTCTGGG
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