FC931911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.234e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 A+ RL + K +K+ P G P+ N+M W +I G T W+GG F LTL+F+EDYP+KPP +F FHPN+Y G++CL IL N W P V +L IQ LL PNP PA + +LF ++ EY R Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDN----NIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNR 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 AR RL + K +++ P G P N+ +W +I G T W+GG F LTL F+EDYP+KPP +F FHPN+Y G++CL IL N W P V IL IQ LL PNP PA ++ +++ ++ EY R Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHDN----NITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNR 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++ Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++ Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++ Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++ Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 AR RL + K +++ P G P N+M W +I G GT +E G F L + FSE+YP+KPP +F FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++ Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAPSEN----NIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL--QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 61/157 (38.85%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 235 MSGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSIL-----------NEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 MS +A RL +E K +N P G A P +D + W+C+I G GT +EGG +P TL F DYP PP KF FFHPNVY GTVC+SIL + W P +V++IL+ + +L +PN A D +++ +D EY R Sbjct: 1 MSKAMALRRLMKEYKELTENGPDGITAGPSNED---DFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCR 154
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24 Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 +R RL + K +++ P G P T+D N++ WE II G T +E G F L+L F+E+YP+KPP KF FHPNVY G++CL IL N W P V IL IQ LLD+PNP PA + QL+ ++ EY++ Sbjct: 5 SRRRLMRDFKKLQEDPPAGVSGAP-TED---NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEK 139
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24 Identity = 58/141 (41.13%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 250 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 A+ RL + K + P G P N+M+W +I G T +E G F LTL F++ YP+KPP +F FHPN+Y +G +CL IL N W P V IL +Q LL+ PNPA PA D QLF ++ EY+R Sbjct: 5 AKRRLIRDFKRLTSDAPIGISGSPNPD----NIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDIL--QNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYER 139 The following BLAST results are available for this feature:
BLAST of FC931911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931911 ID=FC931911; Name=FC931911; organism=Citrus clementina; type=EST; length=707bpback to top |