FC931911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 247 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 +A R+ +E ++ P A P D + W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDD----MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 247 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 +A R+ +E ++ P A P D + W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDD----MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 355 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 355 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 355 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 355 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 355 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 247 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYK 669 +A R+ E K+ P A P D L W+ I G + + GG F L+++F DYP KPPK F +HPN+ +G++CL IL + W PA+T+ ++L+ I LL PNP DP + ++ D + Y+ Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDD----LFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYE 135
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 355 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 W+ I G + ++GG F LT++F DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP + +++ D +Y R Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
BLAST of FC931911 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 355 WECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQDPAEYKR 672 W+ I G + ++GG F LT+ F +YP KPPK +F +HPNV +G++CL IL W PA+T+ ++L+ I LL PNP DP + Q++ D +Y R Sbjct: 33 WQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQ--WSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNR 136 The following BLAST results are available for this feature:
BLAST of FC931911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931911 ID=FC931911; Name=FC931911; organism=Citrus clementina; type=EST; length=707bpback to top |