FC931912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 331 YRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFP 501 YRG+RKRPWG++AAEIRDP K RVWLGTF++ +RG KAK NFP Sbjct: 79 YRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 331 YRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFPLNISDSFNAPIREENGGFCK 561 YRGVR RPWG+FAAEIRDP ++ TRVWLGTF++ LRG KA NFPL + D +N + G + K Sbjct: 137 YRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEV-DKWNPRAEDGRGLYNK 213
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 38/79 (48.10%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 295 KRTGPEASPDI------RYRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFPLNI 510 + T PE + + YRGVR+RPWG+FAAEIRDP K+ +RVWLGTFD+ LRG KA NFPL + Sbjct: 138 ENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEV 216
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1 Query: 331 YRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFPLNISDSFNAPIR 537 YRGVR+RPWG+FAAEIRDP K RVWLGTF++ +RG +A NFPL ++ P+R Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVR 186
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 328 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFP 501 +YRG+R+RPWG++AAEIRDP K +R WLGTFD+ +RG KAK NFP Sbjct: 127 QYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFP 184
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 42/96 (43.75%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 262 STAAAPS--KPIEKRTGPEASPDIR-YRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFPLNISDSFNAPIR 537 +T+ PS P E T P R YRGVR+RPWG+FAAEIRDP K RVWLGT+++ +RG KA NFP I + P+R Sbjct: 77 ATSPVPSVAPPAETTTAQAVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVR 172
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 33/72 (45.83%), Postives = 41/72 (56.94%), Query Frame = 1 Query: 331 YRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFPLNISDSFNAPIREEN 546 YRGVR+RPWG++AAEIRDP K RVWLGTF++ +G KAK NFP + N+ N Sbjct: 90 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSNSTYYSSN 161
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 280 SKPIEKRTGPEASPDIRYRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFPLNI 510 S+ + +T E + YRGVR+RPWG++AAEIRDP KK R+WLGT+D+ LRG KA NFPL++ Sbjct: 72 SRTVSTKTEKEEE-ERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDV 148
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 298 RTGPEASPDIRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFPLNISD 516 R +A P R+ GVR+RPWGR+AAEIRDP K R WLGTFD+ S+RG +A+TNF +D Sbjct: 26 RRSKQAEPG-RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTD 97
BLAST of FC931912 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 328 RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXXSLRGPKAKTNFP 501 ++RG+R+RPWG++AAEIRDP K RVWLGTF+S +RG KAK NFP Sbjct: 119 QFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP 176 The following BLAST results are available for this feature:
BLAST of FC931912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931912 ID=FC931912; Name=FC931912; organism=Citrus clementina; type=EST; length=709bpback to top |