FC931918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931918 vs. ExPASy Swiss-Prot
Match: PAP_CANAL (Poly(A) polymerase PAPalpha OS=Candida albicans GN=PAPALPHA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 3 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKGWVESRLRQLTLKV 323 +PR P D+ H MP+ITPAYP M +++N+++ST ++++ E RG I + E + W LFE +FF YK YL + S ++A++ + W G++ES+LRQL LK+ Sbjct: 287 NPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQ--EIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKL 392
BLAST of FC931918 vs. ExPASy Swiss-Prot
Match: PAP_SCHPO (Poly(A) polymerase pla1 OS=Schizosaccharomyces pombe GN=pla1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 3 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKV 323 +P+ P DK H MPIITPAYP M +++N++ ST I++ E R EI + + + W LF+ FF YK+YL I +A+ A+ W G VES+LR L ++ Sbjct: 287 NPKLYPSDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRL 391
BLAST of FC931918 vs. ExPASy Swiss-Prot
Match: PAPO3_XENLA (Poly(A) polymerase type 3 (Fragment) OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 3 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 224 DPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK Sbjct: 298 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFFQKYK 369
BLAST of FC931918 vs. ExPASy Swiss-Prot
Match: PAP_YEAST (Poly(A) polymerase OS=Saccharomyces cerevisiae GN=PAP1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 3 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVESRLRQLTLKV 323 +P+ +D+ H MP+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK YL I +D+ W G VES++R L +K+ Sbjct: 288 NPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKL 393
BLAST of FC931918 vs. ExPASy Swiss-Prot
Match: PAPA_CANAL (Poly(A) polymerase PAPa OS=Candida albicans GN=PAPA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 3 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKV 323 +PR D+ H MP+ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK YL I + + A+ L+ + G VES+LR L K+ Sbjct: 287 NPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMN--DINVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKL 392 The following BLAST results are available for this feature:
BLAST of FC931918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931918 ID=FC931918; Name=FC931918; organism=Citrus clementina; type=EST; length=698bpback to top |