FC931929

Overview
NameFC931929
Unique NameFC931929
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 83/217 (38.25%), Postives = 126/217 (58.06%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG 664
            F F  I  AT  F P  K+G+GG+G +YKG     +QVA+K L  +S QG  EF+ E+ +++K++H NLV L+G C   E   LVYE++PN SL+  L        L W  R +I   +   +++LH     +I+H DLK  NILLDA+   K++DFG++R    ++  +N   +       GT+ YM PE+   G+ + KS VYSFG+++L  ++G
Sbjct:  332 FDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVV------GTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSG 542          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 83/218 (38.07%), Postives = 126/218 (57.80%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKG-LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            F    IE AT NF    K+G GG+G +YKG LL   ++A+K L   S QG  EF+ E+ +++K++H NLV L+G     E   LVYE++PN SL+  L   +    L W  R  I   +   +++LH      I+H DLK +NILLDA+   K++DFG++R    ++  +N   +       GTF YM PE++  G+ + KS VYSFG+++L  ++G+
Sbjct:  347 FDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVV------GTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGK 558          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35
Identity = 90/221 (40.72%), Postives = 125/221 (56.56%), Query Frame = 2
Query:   17 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKG-LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            + FS  +I+ AT+NFD + +IGEGG+G +YKG L     +A+K L   S QG  EF  EI ++S + HPNLV L G C E     LVYE++ N SL   L   ++    L W TR +I   +   L +LH      IVH D+K  N+LLD     K+SDFG+++ L + + +  +T +       GTF YM PE+   G LT K+ VYSFGI+ L  + GR
Sbjct:  610 ASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAK-LDEEDSTHISTRIA------GTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGR 823          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35
Identity = 79/224 (35.27%), Postives = 127/224 (56.70%), Query Frame = 2
Query:    5 PQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            P++   +    IE AT  F     +G+GG+G ++KG+L+   ++A+K L   S QG  EFQ E  +++K++H NLV ++G C E     LVYE++PN SL+  L        L W  R +I       +++LH   P  I+H DLK +NILLDA    K++DFG++R    ++  ++   +       GT  Y+ PE+L  G+ + KS VYSFG+++L  ++G+
Sbjct:  303 PKYSLQYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVV------GTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGK 520          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35
Identity = 89/235 (37.87%), Postives = 139/235 (59.15%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSL-------------QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPAL 676
            F++SE+   T+NF+    IG+GG+G +Y G L    ++A+KM++  S              Q   EFQ E ++L  + H NL + VG C +     L+YEY+ NG+L+D LS  +N+  LSW+ R+ IA +    L +LH  C+P  IVH D+K ANILL+ N  +K++DFG+S+   ++++S   T +       GT  Y+DPE+  + +L  KS VYSFGI+LL  +TG+ ++
Sbjct:  557 FTYSEVSSITNNFNKV--IGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLS-SENAEDLSWEKRLHIAIDSAQGLEYLHHGCRP-PIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAV------MGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSI 781          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35
Identity = 80/218 (36.70%), Postives = 127/218 (58.26%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            F F  IE AT+ F  + K+G+GG+G +YKG+    +QVA+K L   S QG  EF  E+ +++K++H NLV L+G C E     LVYE++PN SL+  +        L W  R +I   +   +++LH     +I+H DLK  NILL  +  +K++DFG++R    ++  +N   +       GT+ YM PE+   G+ + KS VYSFG+++L  ++G+
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIV------GTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGK 550          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.906e-35
Identity = 86/224 (38.39%), Postives = 131/224 (58.48%), Query Frame = 2
Query:   14 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPP---LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            +  F   +IE AT NF  S KIG+GG+G +YKG L +  +VA+K L   S QG  EF+ E+ +++K++H NLV L+G     E   LV+E++PN SL+  L    N      L W  R  I   +   L++LH     +I+H D+K +NILLDA+   K++DFG++R    ++   +   +       GTF YM PE++A G+ + KS VYSFG+++L  ++GR
Sbjct:  331 YLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVV------GTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGR 548          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 92/229 (40.17%), Postives = 133/229 (58.08%), Query Frame = 2
Query:   17 SDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPP-LSWQTRIRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITR 688
            ++ S  +I  +T +F+ +  IG GG+G +YK  L    +VAIK L   + Q   EFQ E++ LS+ +HPNLV L+G C       L+Y Y+ NGSL+  L  K + PP L W+TR+RIA      L +LH SC+PH I+H D+K +NILL   FV+ L+DFG++R +   +           TD  GT  Y+ PE+  +   T K  VYSFG++LL  LTGR  + + +
Sbjct:  729 NELSLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPH-ILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTH-------VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCK 949          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 86/218 (39.45%), Postives = 128/218 (58.72%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            F F  I  AT +F    KIG+GG+GS+YKG L    ++A+K L   S QG  EF+ E+ +L++++H NLV L+G C E     LVYE++PN SL+  +  ++    L+W  R RI   +   L++LH      I+H DLK +NILLDA    K++DFG++R  + ++      T        GTF YM PE++ +   + K+ VYSFG++LL  +TGR
Sbjct:  327 FDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQ------TRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGR 538          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 83/229 (36.24%), Postives = 133/229 (58.08%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWT--LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITRKCSM 700
            F FS ++ AT +F    K+GEGG+G++YKG+L   Q +A+K L  ++ QG +EF+ E  +++K++H NLV L+G   E     LVYE+LP+ SL+  +        L W+ R +I   +   L++LH      I+H DLK +NILLD     K++DFG++R    +  +   T         GTF YM PE++  G+ + K+ VYSFG+++L  ++G+   G + + SM
Sbjct:  332 FDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIV-----GTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSM 555          
The following BLAST results are available for this feature:
BLAST of FC931929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK20_ARATH1.342e-3538.25Putative cysteine-rich receptor-like protein kinas... [more]
CRK17_ARATH1.342e-3538.07Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
Y1534_ARATH2.290e-3540.72Probable LRR receptor-like serine/threonine-protei... [more]
CRK33_ARATH2.290e-3535.27Putative cysteine-rich receptor-like protein kinas... [more]
Y4291_ARATH2.990e-3537.87Probable LRR receptor-like serine/threonine-protei... [more]
CRK4_ARATH2.990e-3536.70Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK30_ARATH3.906e-3538.39Putative cysteine-rich receptor-like protein kinas... [more]
PSKR1_DAUCA5.101e-3540.17Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CRK38_ARATH5.101e-3539.45Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK26_ARATH5.101e-3536.24Cysteine-rich receptor-like protein kinase 26 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34202F12EF PostHarveN Citrus clementina cDNA clone C34202F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931929 ID=FC931929; Name=FC931929; organism=Citrus clementina; type=EST; length=719bp
CATGCCTCAGTTTTTCTCTGATTTCTCTTTTTCAGAGATTGAGGGAGCAA
CTCATAACTTTGATCCTTCCCTGAAGATTGGGGAAGGAGGATATGGGAGC
ATTTACAAAGGTCTCCTGCGACATATGCAAGTGGCTATTAAGATGTTGCA
CCCTCATAGCTTGCAAGGACCCTCTGAATTTCAACAGGAGATTGATATTC
TGAGTAAGATAAGACATCCAAATCTTGTAACTCTTGTTGGAGCCTGTCCA
GAAGTGTGGACTCTGGTCTACGAGTATCTGCCCAATGGCAGCCTTGAAGA
CCGACTCAGCTGCAAGGATAACTCTCCCCCTTTATCCTGGCAAACTCGAA
TCCGCATTGCCACTGAGCTATGCTCTGTCCTTATCTTTCTCCATTCTTGT
AAACCTCACAGCATTGTGCATGGTGATTTGAAACCTGCCAATATTCTTCT
TGATGCTAACTTTGTTAGCAAACTTAGTGACTTTGGTATCTCTCGCTTTC
TATCTCAAAATGAAATTTCAAGTAACAACACAACACTGTGTTGTAGGACT
GACCCTAAGGGTACATTTGCGTATATGGATCCAGAGTTTCTGGCATCAGG
GGAACTTACTCCGAAGTCAGGTGTTTACTCATTTGGGATTATTTTATTGC
GCTTTTTGACTGGGAGACCAGCTTTGGGGATAACAAGGAAGTGCAGTATG
CATTAGATACAGGAAACTG
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