FC931929

Overview
NameFC931929
Unique NameFC931929
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15159 contig Ccv1_Contig15159:230..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37
Identity = 91/227 (40.09%), Postives = 137/227 (60.35%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITRK 691
            F++SE+   T+NF+  L  G+GG+G +Y G + +  QVA+KML   S QG  EF+ E+++L ++ H NLV LVG C E     L+YEY+ NG L + +S K     L+W+TR++I  E    L +LH+ CKP  +VH D+K  NILL+ +  +KL+DFG+SR       +  +T +       GT  Y+DPE+  +  L  KS VYSFGI+LL  +T +  +  +R+
Sbjct:  582 FTYSEVVTMTNNFERVL--GKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKP-PMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVA------GTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSRE 799          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37
Identity = 89/228 (39.04%), Postives = 135/228 (59.21%), Query Frame = 2
Query:   14 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITR 688
            F  F+   ++ AT+ +D S  +G+GG G++YKG+L  +  VAIK       +   +F  E+ +LS+I H N+V ++G C   EV  LVYE++ NG+L D L        L+W+ R+RIA E+   L +LHS     I+H D+K ANILLD N  +K++DFG S+ +  ++     TT+      +GT  Y+DPE+  +G L  KS VYSFG++L+  L+G+ AL   R
Sbjct:  400 FKIFTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDK--EQLTTMV-----QGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFER 620          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37
Identity = 86/222 (38.74%), Postives = 127/222 (57.21%), Query Frame = 2
Query:   35 EIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRT-DPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPAL 676
            EI   TH+F   LKIGEGG+G +Y+ ++R+   A+K L   +          FQ E+  LS+ RHPN+V   G C +   + LVY +LPNGSLEDRL  +  + PPLSW  R+ I       + FLH   P S++HGD+K +N+LLD   + KL DFG++R       +   ++   RT   +GT AY+  E++ +G L   +  +SFG++LL  L G+ A+
Sbjct:  204 EICQGTHDFSEELKIGEGGFGCVYRAVMRNTVYAVKRLKEEADLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGSLEDRLHVQTQAWPPLSWPQRLDILLGTARAIQFLHQDSP-SLIHGDVKSSNVLLDERLMPKLGDFGLARLSRFTGANPGQSSSVARTRTVRGTLAYLPEEYVKTGRLAVDTDTFSFGVVLLETLAGQRAV 424          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 92/218 (42.20%), Postives = 127/218 (58.26%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQV-AIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRL-SCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG 664
            F+  +I+ AT +F+P+ KIGEGG+G+++KG+L   +V A+K L   S QG  EF  EI  +S ++HPNLV L G C E     L YEY+ N SL   L S K    P+ W TR +I   +   L FLH   P   VH D+K  NILLD +   K+SDFG++R L + E +  +T +       GT  YM PE+   G LT K+ VYSFG+++L  + G
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLAR-LDEEEKTHISTKVA------GTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 84/224 (37.50%), Postives = 129/224 (57.59%), Query Frame = 2
Query:   29 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP-KGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPAL 676
            F EI   T NF   L+IGEGG+G +Y+ ++R+   A+K L   +          F  E++ LS+ RHPN+V   G C E  ++ LVY +LPNGSLED+L  +  +  PLSW  R+ I       + FLH   P S++HGD+K +N+LLD   + KL DFG++RF       ++ ++   RT   +GT AY+  E++ +G L   +  +SFG+++L  L G+ A+
Sbjct:  202 FCEISQGTCNFSEELRIGEGGFGCVYRAVMRNTTYAVKRLKEEADLEWTMVKQSFLTEVEQLSRFRHPNIVDFAGYCAESGLYCLVYGFLPNGSLEDQLHLQTQACSPLSWPQRLDILLGTARAIQFLHQDSP-SLIHGDIKSSNVLLDERLMPKLGDFGLARFSRFAGAKASQSSTVARTSTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVILETLAGQRAV 424          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37
Identity = 91/221 (41.18%), Postives = 133/221 (60.18%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDN---SPPLSWQTRIRIATELCSVLIFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG 664
            FSF EI+ AT NF P   +G+GG+G +YKG L +   VA+K L      G  +FQ E++++    H NL+ L G C  PE   LVY Y+PNGS+ DRL  +DN    P L W  RI IA      L++LH  C P  I+H D+K ANILLD +F + + DFG+++ L Q +  S+ TT       +GT  ++ PE+L++G+ + K+ V+ FG+++L  +TG
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRL--RDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNP-KIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRD--SHVTTAV-----RGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITG 498          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37
Identity = 95/228 (41.67%), Postives = 139/228 (60.96%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFGISR-FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITRK 691
            FS+S++   T+NF   L  G+GG+G +Y G +    QVA+K+L   S QG  +F+ E+++L ++ H NLV LVG C E     L+YEY+ NG L++ +S   N   L+W TR++I  E    L +LH+ CKP  +VH D+K  NILL+ +F +KL+DFG+SR FL + E   +       T   GT  Y+DPE+  +  LT KS VYSFGI+LL  +T R  +  +R+
Sbjct:  568 FSYSQVVIMTNNFQRIL--GKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKP-PMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVS-------TVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSRE 785          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37
Identity = 86/222 (38.74%), Postives = 128/222 (57.66%), Query Frame = 2
Query:    8 QFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG 664
            QF   F    I  AT +F     +G+GG+G++YKG   + Q VA+K L   S QG  EF+ E+ +L++++H NLV L+G C E     LVYE++PN SL+  +  +D    L+W+ R RI   +   L++LH      I+H DLK +NILLDA    K++DFG +R    +E  +    +       GT  YM PE+L  G+++ KS VYSFG++LL  ++G
Sbjct:  331 QFMLRFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIA------GTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISG 546          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37
Identity = 92/228 (40.35%), Postives = 129/228 (56.58%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITRKCS 697
            F++SE+   T+NF     +GEGG+G +  G +    QVA+K+L   S QG   F+ E+D+L ++ H NLV+LVG C E     L+YE+LP G L   LS K     ++W  R+RIA E    L +LHS     IVH D+K  NILLD    +KL+DFG+SR       +  +T +       GT  Y+DPE+  +  L  KS VYSFGI+LL  +T +P +  +R  S
Sbjct:  569 FTYSEVIKMTNNFQRV--VGEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVA------GTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKS 788          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37
Identity = 85/222 (38.29%), Postives = 127/222 (57.21%), Query Frame = 2
Query:    8 QFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKG-LLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG 664
            QF   F    +  AT  F     +G+GG+G++YKG LL   +VA+K L   S QG  EF+ E+ +L++++H NLV L+G C E     LVYE++PN SL+  +   +    L+W+ R RI   +   L++LH      I+H DLK +NILLDA    K++DFG +R    +E  +    +       GT  YM PE+L  G+++ KS VYSFG++LL  ++G
Sbjct:  336 QFMLRFDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIA------GTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISG 551          
The following BLAST results are available for this feature:
BLAST of FC931929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLK6_ARATH1.873e-3740.09Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
WAK3_ARATH2.446e-3739.04Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
IRAK1_BOVIN2.446e-3738.74Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
RKF1_ARATH3.195e-3742.20Probable LRR receptor-like serine/threonine-protei... [more]
IRAK1_MOUSE3.195e-3737.50Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
Y5457_ARATH4.173e-3741.18Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH4.173e-3741.67Probable LRR receptor-like serine/threonine-protei... [more]
CRK40_ARATH4.173e-3738.74Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
PAM74_ARATH5.450e-3740.35Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH5.450e-3738.29Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC34202F12EF PostHarveN Citrus clementina cDNA clone C34202F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931929 ID=FC931929; Name=FC931929; organism=Citrus clementina; type=EST; length=719bp
CATGCCTCAGTTTTTCTCTGATTTCTCTTTTTCAGAGATTGAGGGAGCAA
CTCATAACTTTGATCCTTCCCTGAAGATTGGGGAAGGAGGATATGGGAGC
ATTTACAAAGGTCTCCTGCGACATATGCAAGTGGCTATTAAGATGTTGCA
CCCTCATAGCTTGCAAGGACCCTCTGAATTTCAACAGGAGATTGATATTC
TGAGTAAGATAAGACATCCAAATCTTGTAACTCTTGTTGGAGCCTGTCCA
GAAGTGTGGACTCTGGTCTACGAGTATCTGCCCAATGGCAGCCTTGAAGA
CCGACTCAGCTGCAAGGATAACTCTCCCCCTTTATCCTGGCAAACTCGAA
TCCGCATTGCCACTGAGCTATGCTCTGTCCTTATCTTTCTCCATTCTTGT
AAACCTCACAGCATTGTGCATGGTGATTTGAAACCTGCCAATATTCTTCT
TGATGCTAACTTTGTTAGCAAACTTAGTGACTTTGGTATCTCTCGCTTTC
TATCTCAAAATGAAATTTCAAGTAACAACACAACACTGTGTTGTAGGACT
GACCCTAAGGGTACATTTGCGTATATGGATCCAGAGTTTCTGGCATCAGG
GGAACTTACTCCGAAGTCAGGTGTTTACTCATTTGGGATTATTTTATTGC
GCTTTTTGACTGGGAGACCAGCTTTGGGGATAACAAGGAAGTGCAGTATG
CATTAGATACAGGAAACTG
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