FC931929

Overview
NameFC931929
Unique NameFC931929
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36
Identity = 87/225 (38.67%), Postives = 136/225 (60.44%), Query Frame = 2
Query:   26 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS-CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITRK 691
            ++ E+   T+NF+  L  G+GG+G++Y G L   +VA+KML   S QG  EF+ E+++L ++ H +LV LVG C +     L+YEY+ NG L + +S K     L+W+ R++IA E    L +LH+ C+P  +VH D+K  NILL+    +KL+DFG+SR    +     +T +       GT  Y+DPE+  +  L+ KS VYSFG++LL  +T +P +  TR+
Sbjct:  575 TYPEVLKMTNNFERVL--GKGGFGTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRP-PMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVA------GTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRE 790          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36
Identity = 91/226 (40.27%), Postives = 132/226 (58.41%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEV--WTLVYEYLPNGSLEDRLSCKDNSPP-LSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITR 688
            F+   IE AT  +     IGEGG+GS+Y+G L   Q VA+K+    S QG  EF  E+++LS I+H NLV L+G C E     LVY ++ NGSL DRL  + +    L W TR+ IA      L +LH+    S++H D+K +NILLD +  +K++DFG S++  Q   S          + +GT  Y+DPE+  + +L+ KS V+SFG++LL  ++GR  L I R
Sbjct:  586 FTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDS------YVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKR 803          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36
Identity = 87/230 (37.83%), Postives = 135/230 (58.70%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLL-----------RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPA 673
            ++F +++ AT NF P   +G+GG+G +Y+G +             M VAIK L+  S+QG +E++ E++ L  + H NLV L+G C E     LVYE++P GSLE  L  +++  P  W  RI+I       L FLHS +   +++ D K +NILLD+N+ +KLSDFG+++    +E S   T +       GT+ Y  PE++A+G L  KS V++FG++LL  +TG  A
Sbjct:   74 YNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRND--PFPWDLRIKIVIGAARGLAFLHSLQ-REVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIM------GTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTA 294          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36
Identity = 84/218 (38.53%), Postives = 128/218 (58.72%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            F F  IE AT  F    K+G+GG+G +YKG L + +QVA+K L   S QG  EF+ E+ +++K++H NLV L+G C   E   LVYE++ N SL+  L        L W TR +I   +   +++LH     +I+H DLK  NILLDA+   K++DFG++R    ++  ++   +       GT+ YM PE+   G+ + KS VYSFG+++L  ++GR
Sbjct:  328 FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVV------GTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGR 539          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36
Identity = 83/218 (38.07%), Postives = 129/218 (59.17%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLL-RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            F F+ IE AT NF  + K+G+GG+G +YKG+L    ++A+K L  +S QG  EF+ E+ I++K++H NLV L+G C E     LVYE++ N SL+  L        L W+ R  I   +   L++LH     +I+H D+K +NILLDA+   K++DFG++R    ++       +       GTF YM PE++  G+ + KS VYSFG+++L  + G+
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVV------GTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGK 538          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.532e-36
Identity = 90/225 (40.00%), Postives = 132/225 (58.67%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG-RPALGIT 685
            FS  E+E AT NF  S  +G+GG G++YKG+L   + VA+K           EF  E+ ILS+I H ++V L+G C   EV TLVYE++PNG+L   +  + +    +W  R+RIA ++   L +LHS     I H D+K  NILLD  + +K+SDFG SR ++   I   + T    T   GT  Y+DPE+  S + T KS VYSFG++L+  +TG +P + ++
Sbjct:  439 FSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVT---IDHTHWT----TVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVS 656          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.532e-36
Identity = 83/217 (38.25%), Postives = 126/217 (58.06%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG 664
            F F  IE AT+ F P  K+G+GG+G +YKG L   +QVA+K L   S QG  EF+ E+ +++K++H NLV L+G C   E   LVYE++PN SL+  L        L W  R +I   +   +++LH     +I+H DLK  NILLD +   K++DFG++R    ++  +    +       GT+ YM PE+   G+ + KS VYSFG+++L  ++G
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVV------GTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISG 524          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36
Identity = 82/216 (37.96%), Postives = 128/216 (59.26%), Query Frame = 2
Query:   29 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGR 667
            +  I+ AT++F  S KIG GG+G +YKG   +  +VA+K L  +S QG +EF+ E+ +++K++H NLV L+G     E   LVYEY+PN SL+  L        L W  R  I   +   +++LH     +I+H DLK +NILLDA+   K++DFG++R    ++   N + +       GT+ YM PE+   G+ + KS VYSFG+++L  ++GR
Sbjct:  343 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIV------GTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGR 552          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.614e-36
Identity = 85/217 (39.17%), Postives = 129/217 (59.45%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTG 664
            F    I  AT+ F    K+G+GG+GS+YKG+L   Q +A+K L   S QG  EF+ E+ +L++++H NLV L+G C E     LVYE++PN SL+  +  +D    L+W  R RI   +   L++LH      I+H DLK +NILLDA    K++DFG++R  + +E     + +       GT+ YM PE++  G+ + KS VYSFG++LL  ++G
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVV------GTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISG 538          
BLAST of FC931929 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36
Identity = 88/225 (39.11%), Postives = 131/225 (58.22%), Query Frame = 2
Query:   23 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSGVYSFGIILLRFLTGRPALGITR 688
            F+   ++ AT  ++ S  +G+GG G++YKG+L+    VAIK           +F  E+ +LS+I H N+V L+G C   EV  LVYE++ +G+L D L        L+W+ R+RIA E+   L +LHS     I+H D+K ANILLD N  +K++DFG SR +  ++     TT+      +GT  Y+DPE+  +G L  KS VYSFG++L+  L+G  AL   R
Sbjct:  396 FTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQ--EQLTTMV-----QGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFER 613          
The following BLAST results are available for this feature:
BLAST of FC931929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1518_ARATH2.705e-3638.67Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR2.705e-3640.27Nodulation receptor kinase OS=Medicago truncatula ... [more]
CX32_ARATH2.705e-3637.83Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK5_ARATH2.705e-3638.53Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK31_ARATH2.705e-3638.07Putative cysteine-rich receptor-like protein kinas... [more]
WAKLK_ARATH3.532e-3640.00Putative wall-associated receptor kinase-like 11 O... [more]
CRK19_ARATH3.532e-3638.25Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK8_ARATH4.614e-3637.96Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK36_ARATH4.614e-3639.17Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
WAK5_ARATH6.025e-3639.11Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34202F12EF PostHarveN Citrus clementina cDNA clone C34202F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931929 ID=FC931929; Name=FC931929; organism=Citrus clementina; type=EST; length=719bp
CATGCCTCAGTTTTTCTCTGATTTCTCTTTTTCAGAGATTGAGGGAGCAA
CTCATAACTTTGATCCTTCCCTGAAGATTGGGGAAGGAGGATATGGGAGC
ATTTACAAAGGTCTCCTGCGACATATGCAAGTGGCTATTAAGATGTTGCA
CCCTCATAGCTTGCAAGGACCCTCTGAATTTCAACAGGAGATTGATATTC
TGAGTAAGATAAGACATCCAAATCTTGTAACTCTTGTTGGAGCCTGTCCA
GAAGTGTGGACTCTGGTCTACGAGTATCTGCCCAATGGCAGCCTTGAAGA
CCGACTCAGCTGCAAGGATAACTCTCCCCCTTTATCCTGGCAAACTCGAA
TCCGCATTGCCACTGAGCTATGCTCTGTCCTTATCTTTCTCCATTCTTGT
AAACCTCACAGCATTGTGCATGGTGATTTGAAACCTGCCAATATTCTTCT
TGATGCTAACTTTGTTAGCAAACTTAGTGACTTTGGTATCTCTCGCTTTC
TATCTCAAAATGAAATTTCAAGTAACAACACAACACTGTGTTGTAGGACT
GACCCTAAGGGTACATTTGCGTATATGGATCCAGAGTTTCTGGCATCAGG
GGAACTTACTCCGAAGTCAGGTGTTTACTCATTTGGGATTATTTTATTGC
GCTTTTTGACTGGGAGACCAGCTTTGGGGATAACAAGGAAGTGCAGTATG
CATTAGATACAGGAAACTG
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