FC931932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: GLYR1_XENTR (Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 63/196 (32.14%), Postives = 108/196 (55.10%), Query Frame = 1 Query: 106 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFA 690 I P+ +IG++G+G+MG+ + S LL G++VTV+ RT+ K +GA + +P +V + + F+ V P+ + + L P G++ G+ PG YVD ++ P E+ +V + ++APVSG + DG L I AAGD V + + F +GK + F+GE G + +V G+ + ++EG+ A Sbjct: 244 IIPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAHMGRTPAEVVSTCDITFACVADPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDQGVYEDCSSCFLAMGKTSFFLGEVGNAARMMLILNMVQGSFMATIAEGMTLA 439
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: GLYR1_PONAB (Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 63/196 (32.14%), Postives = 108/196 (55.10%), Query Frame = 1 Query: 106 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFA 690 ITP+ +IG++G+G+MG+ + S LL G++VTV+ RT+ K +GA L +P +V + + F+ V P+ + + L P G++ G+ P YVD ++ E+ +V + ++APVSG + DG L I AAGD + + + F+ +GK + F+GE G + +V G+ + ++EGL A Sbjct: 263 ITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWDRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPRKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLA 458
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: GLYR1_MOUSE (Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 64/196 (32.65%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 106 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFA 690 ITP+ +IG++G+G+MG+ + S LL G++VTV+ RT+ K +GA L +P +V + + F+ V P+ + + L P G++ G+ PG YVD ++ E+ +V + ++APVSG + DG L I AAGD + + + F+ +GK + F+GE G + +V G+ + ++EGL A Sbjct: 262 ITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK------EGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLA 451
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_DICDI (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24 Identity = 59/192 (30.73%), Postives = 102/192 (53.12%), Query Frame = 1 Query: 109 TPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKP-TFMGEAGCGQSCKIANQIVVGANLLGLSEGL 681 T S +G+IG+G MG A L+ G+++ V+ + +L+ +GA +A SP +VAK + V+ +M+ V+++ +GI + PG + +D+++ PA ARE+ +A++ +D PVSGG GA G L G E +GK G+ G GQ K+ N +V+G +++ +SE + Sbjct: 19 TSSSKTVGFIGLGNMGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAM 210
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: GLYR1_AEDAE (Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti GN=AAEL006684 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.459e-23 Identity = 63/197 (31.98%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 106 ITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIVVGANLLGLSEGLVFAD 693 I S + G++G+G+MG M LL++G+SV V+ RT++K + Q GA +A +P DV + + V FS V PQ + + G++S G YV+ T P + +I + K ++A + G A +G L I AAG+ + + FE + + +F MG+ G + Q++ G L G++EGL AD Sbjct: 269 IQASNLKFGFLGLGIMGCGMVKNLLNSGHSVVVWNRTATKCRKFQEAGAEVADTPSDVIEMTDVTFSCVADPQVAKELVFGNCGVMSANLVGKGYVEMTGVDPETSHDIAEQIIAKGGRYLEAQIQGSKNQAEEGTLIILAAGERLLFEECQTCFEAISRNSFYMGDVGNATKMNLVLQMISGVMLAGIAEGLALAD 465
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: MMSB_PSEAE (3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa GN=mmsB PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22 Identity = 65/188 (34.57%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 121 TRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIVVGANLLGLSEGL 681 T I ++G+G MG MA+ LL AG+ V V+ L L QGA A S + + VV SM+ Q V S+ L DG+++ + + +D ++ P AR++ + A K +DAPVSGG GAR G L+ G + P+ E +G+ F G+ G GQ KI N +++G + G +E L Sbjct: 2 TDIAFLGLGNMGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVISMLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEAL 189
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: GLYR1_ANOGA (Putative oxidoreductase GLYR1 homolog OS=Anopheles gambiae GN=AGAP009949 PE=3 SV=5) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 62/227 (27.31%), Postives = 110/227 (48.46%), Query Frame = 1 Query: 16 HKLTSFFTPQSPSSLSLINSANMETPYPKPITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF-MGEAGCGQSCKIANQIVVGANLLGLSEGLVFAD 693 H L T P + + S+ + I S+ + G++G+GVMG + L+ +G+SV V+ R++ K + Q GA +A +P DV + + V +S V PQ + + G++S G YV+ T P + +I + K ++A + G A +G L I A+GD + + FE + + +F +G+ G + Q++ G L G++E + AD Sbjct: 246 HLLNRPVTVTRPETPEIDMSSVSNAVQSRNIKASQLKFGFLGLGVMGCGIVKNLIKSGHSVVVWNRSAHKCRKFQEVGAEVADTPSDVVEMTDVTYSCVSDPQVAKDMVFGNCGVMSANLAGKGYVEMTGVDPETSNDINEAIISKGGRYLEAQIQGSKNQAEEGTLIILASGDRLLFEECQSCFEAISRNSFYLGDVGNATKMNLILQMISGITLAGVAEAMALAD 472
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_MOUSE (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 55/190 (28.95%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 115 SKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG-KPTFMGEAGCGQSCKIANQIVVGANLLGLSEGL 681 SKT +G+IG+G MGN MA L+ GY + +Y + + G +A+SP +VA+ + + +M+ + + + +GI+ + G++ +D+++ P++++E+ K + +DAPVSGG AR G L G L E +G + G G GQS KI N +++ +++G +E + Sbjct: 37 SKTPVGFIGLGNMGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITMLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAM 226
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_PONAB (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 56/190 (29.47%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 115 SKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG-KPTFMGEAGCGQSCKIANQIVVGANLLGLSEGL 681 SKT +G+IG+G MGN MA L+ GY + +Y + Q G + +SP DVA+ + + +M+ T + +GI+ + G++ +D+++ PA+++E+ K + +DAPVSGG AR G L G L +G + G G GQ+ KI N +++ +++G +E + Sbjct: 38 SKTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAM 227
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_HUMAN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 56/190 (29.47%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 115 SKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG-KPTFMGEAGCGQSCKIANQIVVGANLLGLSEGL 681 SKT +G+IG+G MGN MA L+ GY + +Y + Q G + +SP DVA+ + + +M+ T + +GI+ + G++ +D+++ PA+++E+ K + +DAPVSGG AR G L G L +G + G G GQ+ KI N +++ +++G +E + Sbjct: 38 SKTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAM 227 The following BLAST results are available for this feature:
BLAST of FC931932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931932 ID=FC931932; Name=FC931932; organism=Citrus clementina; type=EST; length=694bpback to top |