FC931932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_RAT (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20 Identity = 55/190 (28.95%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 115 SKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGL 681 SKT +G+IG+G MGN MA L+ GY + +Y + + G +A+SP DVA+ + + +M+ + + + +GI+ + G++ +D+++ P++++E+ K + +DAPVSGG AR G L G L +G + G G GQS KI N +++ +++G +E + Sbjct: 37 SKTPVGFIGLGNMGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITMLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAM 226
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_BOVIN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=HIBADH PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20 Identity = 61/218 (27.98%), Postives = 108/218 (49.54%), Query Frame = 1 Query: 40 PQSPSSLSLINSANMETPYPKPITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG----KPTFMGEAGCGQSCKIANQIVVGANLLGLSEGL 681 P + +SL+ + S +M SKT +G+IG+G MGN MA L+ GY + +Y + G + +SP DVA+ + + +M+ T + +GI+ + G++ +D+++ P +++E+ K + +DAPVSGG AR G L G V + E+LG + G G GQ+ KI N +++ +++G +E + Sbjct: 22 PPAVASLAAVCSRSMA---------SKTPVGFIGVGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGG---VEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIGTAEAM 227
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_DROME (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG15093 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19 Identity = 58/189 (30.69%), Postives = 99/189 (52.38%), Query Frame = 1 Query: 127 IGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKP-TFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFA 690 IG++G+G MG MAS L+ AG+ + V+ + L ++GAT+ A ++AK+S V +M+ P + A + G+N +++D+++ P L + + K K +DAPVSGG GA L G A + + E +GK T G G GQ+ K+ N +++ +++G+SE + A Sbjct: 31 IGFVGLGNMGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVITML--PNNAIVDASYDEMTADGVNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLA 217
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: Y229_SYNY3 (Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain PCC 6803) GN=slr0229 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 55/194 (28.35%), Postives = 98/194 (50.52%), Query Frame = 1 Query: 121 TRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSK--ALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG-KPTFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFAD 693 ++I G+GVMG+ MA L+ GY Y RT + + G + S A ++ ++ + VG +DV+ + L GI P A+ +D ++ A E+ + + +DAPV+GGD+GA +G L I GD + + P+ + +G K G +G GQ+ K+ NQ++ G + + +E + ++ Sbjct: 4 SKIAVFGLGVMGSPMAQNLVKNGYQTVGYNRTLERPSVQEAAKAGVKVVTSIAVAAANADIILTCVGDEKDVQQLILGSGGIAEYAKPQALIIDCSTIGKTAAYELATNLKLQGLRFLDAPVTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSE 197
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: GLYR1_DROME (Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster GN=CG4747 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 60/218 (27.52%), Postives = 109/218 (50.00%), Query Frame = 1 Query: 49 PSSLSLINSANMETPYPKPITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGI--VSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFAD 693 P + + S+ T + I PS+ G++G+G+MG+ + L+ G+ V V+ RT K GA + +P DV +++ V+F V P+ + + G+ + LN A YV+ ++ P + +I + ++ + ++A + G A +G L I A GD +V + F+ + K T F+G G + Q ++G +L+GL+E L AD Sbjct: 292 PEAQVIDMSSRSNTLADRDIVPSEQTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCCVSDPKGAKDLVFGNCGVLQLKDLNNKA-YVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVGLAEALALAD 508
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: 3HIDH_ARATH (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 2.411e-18 Identity = 57/198 (28.79%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 127 IGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNP--GAVYVDTTSSHPALAREI------FKVAREKDCW----AVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGL 681 +G+IG+G MG M + L+ AGY VTV+ G + +P++VA+ S VV +M+ + V + +G++ G N A+++D+++ P R+I + ++D W +DAPVSGG + A G L G P+ + +G+ + + G +G G + KI N + + ++LG SE L Sbjct: 40 VGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVITMLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSSTIDPQTTRKISLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEAL 237
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: MMSB_MYCTU (Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium tuberculosis GN=mmsB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 55/192 (28.65%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 121 TRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFE-VLGKPTFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFAD 693 T I ++G+G MG M++ L+ AG+ V + + A + G + S + + VV +M+ T + VR D +++ P +++D+++ ARE+ +A +DAPVSGG GA LA GD + ++ P+ E + GK G AG GQ+ K+ N +V+ + ++E V A+ Sbjct: 2 TTIAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAVFRSAPEAVAEADVVITMLPTGEVVRRCYTD---VLAAARPATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAE 190
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: MMSB_MYCBO (Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium bovis GN=mmsB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 55/192 (28.65%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 121 TRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFE-VLGKPTFMGEAGCGQSCKIANQIVVGANLLGLSEGLVFAD 693 T I ++G+G MG M++ L+ AG+ V + + A + G + S + + VV +M+ T + VR D +++ P +++D+++ ARE+ +A +DAPVSGG GA LA GD + ++ P+ E + GK G AG GQ+ K+ N +V+ + ++E V A+ Sbjct: 2 TTIAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAVFRSAPEAVAEADVVITMLPTGEVVRRCYTD---VLAAARPATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAE 190
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: GLYR1_DROPS (Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA18401 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.563e-17 Identity = 55/217 (25.35%), Postives = 105/217 (48.39%), Query Frame = 1 Query: 49 PSSLSLINSANMETPYPKPITPSKTRIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLN-PGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPT-FMGEAGCGQSCKIANQIVVGANLLGLSEGLVFAD 693 P + ++ ++ T + I PS+ G++G+G+MG+ + L+ G+ V V+ RT K GA + +P DV +++ ++F V P+ + + G++ + YV+ ++ P + +I + ++ + ++A + G A DG L I A GD V + F+ + K T F+G G + Q + +L+GL+E L AD Sbjct: 302 PETQAIDMNSRSNTLADRDIVPSELTFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFVEAGAEVKDTPMDVVEAADIIFCCVSDPKGAKDLVFGNCGVLQLKDLRNKAYVEMSTVDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAADGMLIILAGGDRTVFEECHSCFKTIAKNTFFLGNVGNACKVNLILQTIQAVSLVGLAEALALAD 518
BLAST of FC931932 vs. ExPASy Swiss-Prot
Match: YFJR_BACSU (Uncharacterized oxidoreductase yfjR OS=Bacillus subtilis GN=yfjR PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 55/183 (30.05%), Postives = 87/183 (47.54%), Query Frame = 1 Query: 124 RIGWIGIGVMGNAMASRLLSAGYSVTVYARTSSKALQLQSQGATLAASPFDVAKSSGVVFSMVGTPQDVRSIALDPDGIVSGLNPGAVYVDTTSSHPALAREIFKVAREKDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGEAGCGQSCKIANQIVVGANLLGLS 672 +I IG+G MG +A +L AGY +TVY RT K L ++GA A +P AKS+ +V +M+ V ++ DG++ GL +++ ++ + ++ EK + + APV G A L I AG + Q PL + L + F G+ K AN + N L +S Sbjct: 2 KIAVIGLGNMGQPIARNVLQAGYELTVYNRTKQKTEDLVTEGAQAADTPRLAAKSADIVITMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEFSEKLAAAHAEKGQFFLAAPVLGRPDAAAKAALRIITAGPAEAKQAAKPLLDSLSQQIF----DVGEESKTANAAKISINFLLVS 180 The following BLAST results are available for this feature:
BLAST of FC931932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931932 ID=FC931932; Name=FC931932; organism=Citrus clementina; type=EST; length=694bpback to top |