FC931933

Overview
NameFC931933
Unique NameFC931933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_ENCCU (Elongation factor 2 OS=Encephalitozoon cuniculi GN=EFT1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.143e-42
Identity = 51/127 (40.16%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  298 SKQHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVI 678
            + +HNR+YM   PL++ + + + D +    D  K  +    E+     D  +KIWC+ PE    N++VD  KG+  +NEIK+ V  GF+ A  +G L  E MRG+ FE+ D VLHADAIHRG  Q++
Sbjct:  591 ANKHNRIYMTVEPLDQNIVDNLKDVK---SDQAKTMATNFREKLDIRDDWIRKIWCYAPEVNPLNLLVDGTKGISIINEIKEHVNTGFRAAVNDGPLIGEVMRGLKFELKDAVLHADAIHRGINQLL 714          

HSP 2 Score: 92.4337 bits (228), Expect = 5.143e-42
Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 2
Query:    2 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            KFSVSPVV+VAV  K   DL KL EGL +LA+SDP+ V    + G++ IA AG LHLEICLKDLQD +     II  DP+V++ E +      + M+KS N
Sbjct:  493 KFSVSPVVKVAVSAKRPEDLGKLQEGLNKLAQSDPLCVVERNDKGQNTIACAGSLHLEICLKDLQDQY-AKVPIIADDPLVTYFEGISCAVSDSKMTKSAN 592          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_AERPE (Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.521e-41
Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HN+LY+   PL E     I +G +    DPK R++IL+++ GWD + A+KIW         N+ VD   GVQYL E+KD+++AGF+ A KEG LA E +RG+   + D V+H D +HRG GQ+ P
Sbjct:  488 KHNKLYISVEPLNEETITLIQNGAVTEDQDPKDRARILADKAGWDYNEARKIWAIDENI---NVFVDKTAGVQYLREVKDTIIAGFRLALKEGPLAAEPVRGVKVVLHDAVIHEDPVHRGPGQLYP 610          

HSP 2 Score: 76.2554 bits (186), Expect = 2.521e-41
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    2 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDP-MVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            ++   PVV +AV+     DLPK++E L++L   DP +VV   EE+GE++++G G LHLEI L  L++ F  G E+  S P+V +RE V ++S R    KSPN
Sbjct:  389 RYVSEPVVTIAVEPVKIQDLPKMIEALRKLTIEDPNLVVKINEETGEYLLSGMGPLHLEIALTMLREKF--GVEVKASPPIVVYRETVRQQS-RVFEGKSPN 487          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_STAMF (Elongation factor 2 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=fusA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.576e-41
Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HN+LY+   PL+E     I DG I    DPK R+K+L EE GW  D A++IW         N+ VD+  GVQ+L E+KD+++ GF+ A +EG LA E +RG+   + D ++H D  HRG GQ+ P
Sbjct:  488 KHNKLYISVEPLDEKTISLIHDGIITEDMDPKQRAKVLREEAGWPTDQARRIWAIDENI---NVFVDLTTGVQHLREVKDTIIQGFRLAMREGPLAMEPVRGVKVILHDAIIHEDPAHRGPGQIYP 610          

HSP 2 Score: 77.411 bits (189), Expect = 5.576e-41
Identity = 42/97 (43.30%), Postives = 66/97 (68.04%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDP-MVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VA++ K   DLPKL++ L +L+  DP +VV   EE+GE++++G G LH+EI L  L++++  G ++I S P++ +RE + +KS R    KSPN
Sbjct:  394 PVVTVAIEPKNPRDLPKLIDALHKLSIEDPSLVVRINEETGEYLLSGMGPLHIEIALTFLKENY--GLDVIASQPIIVYRESIRDKS-RVFEGKSPN 487          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.524e-39
Identity = 52/126 (41.27%), Postives = 79/126 (62.70%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HN+LY+   PLE+ + E I  G I    DP+ R+K+L ++  WD D A++IW    E    N+ +D   GVQ+L E+KD+++AG++ A KEG LA+E +RG+   + D V+H D  HRG  Q+ P
Sbjct:  491 KHNKLYITVEPLEKEVIEMIQKGEITDDQDPRERAKVLRDKVNWDADTARRIWAVDEENF--NIFIDKTVGVQHLREVKDTILAGWRLAMKEGPLAKEPVRGVKVILWDAVIHEDPAHRGPAQLYP 614          

HSP 2 Score: 71.633 bits (174), Expect = 6.524e-39
Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDP-MVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VA++ K   DLPKL+E L+ L+  DP + V   +E+GE++++G G LH+EI L  L++ +  G E+  S PV+++RE V  K    V  KSPN
Sbjct:  397 PVVTVAIEPKNPRDLPKLIEALRTLSIEDPNLKVTINQETGEYLLSGMGMLHIEIALTQLKEVY--GLEVKVSPPVITYRETV-RKPGEKVEGKSPN 490          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.197e-37
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 1
Query:  307 HNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            HNR Y+E  PLE G+ E + DG+I  + +   R KIL E  G DK+ A+ +  F    +G NM ++M KG+QYL E  + ++ GF+ A   G +  E ++GI  ++ DV LH DA+HRG  QVIP
Sbjct:  485 HNRFYIEIEPLEPGVIEVLKDGKIDMKMEEVERRKILIEA-GMDKEEARNMVNF----VGTNMFLNMTKGIQYLRETMELILEGFEEAITAGPICREPVQGIKAKLVDVKLHEDAVHRGPAQVIP 604          

HSP 2 Score: 80.4925 bits (197), Expect = 1.197e-37
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPNN 307
            PV+ VAV+ K   DLPKL+E L++ AK DP +  ++ EE+GEH++AG GELHLEI    +Q D   G EI  S P+V +RE V  KS   V  KSPN+
Sbjct:  390 PVMTVAVEAKNMRDLPKLIEVLRQTAKEDPTLQITINEETGEHLMAGMGELHLEIVATRIQRD--KGVEIKTSPPIVVYRESVTGKS-GPVEGKSPNH 484          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.285e-36
Identity = 49/130 (37.69%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETI-GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPLLE 690
            +HN+ Y+   P+EE + EAI++G+  P +  K   +    E+G D+D AK +     ET+ G N  +D   G+QYLNE+ + ++ GF+ A +EG LA+E  RG+   + D  +H D +HRG  QVIP ++
Sbjct: 1007 KHNKFYVTVEPVEEEIVEAIEEGKFNPEEMSKKELEETLMEYGMDRDDAKAV-----ETVKGTNFFLDKTVGLQYLNEVMELLIEGFEEAMEEGPLAKEPCRGVKVSLVDAEIHEDPVHRGPAQVIPAIK 1131          

HSP 2 Score: 76.2554 bits (186), Expect = 1.285e-36
Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VAV+ K   DLPKL+E L ++AK DP V   + EE+G+H+++G GELHLEI    +++    G +I  S+P+V +RE V       V  KSPN
Sbjct:  913 PVVTVAVEAKNTQDLPKLIEILHQIAKEDPTVKVEINEETGQHLVSGMGELHLEIIAHRIKE---RGVDIKVSEPIVVYREGVFGVCDDEVEGKSPN 1006          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.194e-36
Identity = 55/126 (43.65%), Postives = 75/126 (59.52%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HN+LY    PL+E   E I    I    DP+ R+KIL E+ GWD D A+ IW         N++VD   G+QYL EI+D +V GF+WA + G LA+E MRG+   + D V+H D  HRG  Q++P
Sbjct:  490 KHNKLYFYVEPLDETTVELIATKEITEEQDPRERAKILREKAGWDTDEARGIWAIDDRYF--NVIVDKTTGIQYLREIRDYIVQGFRWAMEAGPLAQEPMRGVKVVLVDAVVHEDPAHRGPAQIMP 613          

HSP 2 Score: 60.077 bits (144), Expect = 2.194e-36
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 2
Query:    2 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            ++   PVV VA++ K  ++L KLVE LK L   DP +   + +E+G+ +++G G LHLEI    L++      E   S P++ FRE V E+S +    KSPN
Sbjct:  391 RYIAEPVVTVAIEPKNPAELAKLVEALKDLVIEDPTLDLKIDQETGQILLSGVGTLHLEIATWLLKE--RAKTEFTVSPPLIRFRETVRERS-QVWEGKSPN 489          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.194e-36
Identity = 46/131 (35.11%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEF---GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPLL 687
            +HNR Y+   PLE+ L +A+ +G++    + KV+ K  + +F   G DK+ A+K+W    +    ++ ++  +G+QYL+E+K+ ++ GF+ A  +G LA+E   G+ F++ D  LH DA+HRG  QV+P +
Sbjct:  484 KHNRFYITVEPLEDELFKALQEGKL---KEGKVKGKESANDFMEYGLDKEEARKVW----DVYNRSVFINATRGIQYLDEVKELLIEGFESALNDGPLAKEIAMGLKFKLHDAKLHEDAVHRGPAQVLPAI 607          

HSP 2 Score: 81.2629 bits (199), Expect = 2.194e-36
Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VAV+ K   DLPKL+E L+++AK DP +   + EE+GEH+++G GELHLE+    ++D    G EI  S+P+V +RE V + S + V  KSPN
Sbjct:  391 PVVTVAVEAKNTKDLPKLIEVLRQVAKEDPTIKVEINEETGEHLVSGMGELHLEVISYRIKDK---GVEIQTSEPIVVYRETVSQLSPQ-VEGKSPN 483          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.858e-36
Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNRLY    PL+E   E I    I    DP+ R+KIL E+ GWD D A+ IW         N++VD   G+QYL EI+D +V GF+WA++ G LA+E +RG+   + D V+H D  HRG  Q++P
Sbjct:  490 KHNRLYFYVEPLDETTIELIATKEITEDQDPRERAKILREKAGWDTDEARGIWAIDDRYF--NVIVDKTSGIQYLREIRDYIVQGFRWATEAGPLAQEPIRGVKVVLVDAVVHEDPAHRGPAQIMP 613          

HSP 2 Score: 60.077 bits (144), Expect = 2.858e-36
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 2
Query:    2 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            ++   PVV VA++ K  ++L KLVE LK L   DP +   + +E+G+ +++G G LHLEI    L++      E   S P++ FRE V E+S +    KSPN
Sbjct:  391 RYIAEPVVTVAIEPKNPAELAKLVEALKDLVIEDPTLDLKIDQETGQILLSGVGTLHLEIATWLLKE--RSKTEFTVSPPLIRFRETVRERS-QVWEGKSPN 489          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_DESMO (Elongation factor 2 OS=Desulfurococcus mobilis GN=fusA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.849e-36
Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HN+ Y+   PL E     + +G I    D + R+KIL E+ GWD D A++I          NM+VDM  GVQYL EIKD+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P
Sbjct:  486 KHNKFYISVAPLNEETLRLMSEGIIVEDMDARERAKILREQAGWDADEARRIMAIDENL---NMLVDMTTGVQYLREIKDTVIQGFRLAMKEGPLAMEPVRGVKVVLHDAVVHEDPAHRGPAQIFP 608          

HSP 2 Score: 67.781 bits (164), Expect = 4.849e-36
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 2
Query:   20 VVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            VV VA++ K    L KLV+ L +L   DP ++  + EE+GE++++G G LH+EI L  L+D  + G E++ S PV+ +RE V E S +    KSPN
Sbjct:  393 VVTVAIEPKNPQQLTKLVDALYKLHLEDPSLIVKINEETGEYLLSGVGTLHIEIALTLLKD--LYGLEVVASPPVIVYRETVRESS-QVFEGKSPN 485          
The following BLAST results are available for this feature:
BLAST of FC931933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
EF2_ENCCU5.143e-4240.16Elongation factor 2 OS=Encephalitozoon cuniculi GN... [more]
EF2_AERPE2.521e-4143.65Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE... [more]
EF2_STAMF5.576e-4142.86Elongation factor 2 OS=Staphylothermus marinus (st... [more]
EF2_IGNH46.524e-3941.27Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_METTP1.197e-3742.40Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_METKA1.285e-3637.69Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_PYRAR2.194e-3643.65Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]
EF2_METS32.194e-3635.11Elongation factor 2 OS=Methanobrevibacter smithii ... [more]
EF2_PYRIL2.858e-3643.65Elongation factor 2 OS=Pyrobaculum islandicum (str... [more]
EF2_DESMO4.849e-3643.65Elongation factor 2 OS=Desulfurococcus mobilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34202G04EF PostHarveN Citrus clementina cDNA clone C34202G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931933 ID=FC931933; Name=FC931933; organism=Citrus clementina; type=EST; length=712bp
GAAGTTTTCCGTCTCACCTGTGGTTCGTGTGGCTGTACAGTGCAAAGTTG
CATCTGATCTCCCTAAGCTTGTTGAAGGTCTTAAACGGTTGGCCAAGTCA
GATCCCATGGTTGTCTGTTCCATGGAGGAATCTGGAGAGCATATCATTGC
CGGTGCAGGAGAACTCCATCTTGAGATCTGTTTGAAGGATTTGCAGGATG
ATTTCATGGGTGGTGCTGAGATTATCAAATCTGATCCTGTTGTGTCCTTC
CGTGAGATTGTCCTTGAGAAGTCCTGCCGTACTGTTATGAGCAAGTCTCC
AAACAACACAATCGTCTCTATATGGAAGCCCGGCCATTGGAGGAAGGTCT
TGCTGAGGCAATTGATGATGGTCGTATTGGTCCAAGGGATGATCCTAAGG
TTCGTTCTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTGCC
AAGAAAATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTTGT
GGATATGTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGTTG
TTGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAAC
ATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGATGC
TATCCACAGAGGTGGTGGCCAGGTTATTCCACTGCTAGAANGGTCATTTA
TACATCCCAGCT
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