FC931933

Overview
NameFC931933
Unique NameFC931933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15417 contig Ccv1_Contig15417:1..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.866e-32
Identity = 49/126 (38.89%), Postives = 66/126 (52.38%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNR Y+   PLE  + E I +  I  R  P+V  +      G +KD AKKI          N   DM KG+QYLNE  + ++ GF    K G L++E   G+  ++ D  LH DA+HRG  QVIP
Sbjct:  484 RHNRFYVIVEPLEPEVRELIRNDEISMRM-PEVERREKLMAAGLNKDEAKKI----VNIFESNAYFDMTKGIQYLNETMELIIEGFTEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIP 604          

HSP 2 Score: 78.5666 bits (192), Expect = 3.866e-32
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    2 KFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            K +  PVV VAV+ K   DLPKLVE L+++AK DP +  ++ EE+GEH++AG GELHLE+    ++ D   G EI  + P+V +RE  +  +   V  KSPN
Sbjct:  385 KHASEPVVTVAVEAKHMKDLPKLVEVLRQVAKEDPTLKITLDEETGEHLMAGMGELHLEVIAHRIERD--KGVEITTTPPLVVYRE-TITGTAGPVEGKSPN 483          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.035e-32
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRD---DPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNR Y E  PL+  + +AI+DG I       D K   ++L  + G D+D AK + C      G NM+ D+ +G+QYL+E  + ++  F      G LA E + G+   + D  LH D+IHRG  QVIP
Sbjct:  483 KHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKALVELLVSK-GIDRDEAKGLVCVE----GTNMMFDVTRGIQYLDETMELLIEAFVEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIP 606          

HSP 2 Score: 78.1814 bits (191), Expect = 5.035e-32
Identity = 41/97 (42.27%), Postives = 66/97 (68.04%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV +A++ K  +DLP+L+E L+ ++K+DP +   + +E+GEH+I+G GELHL++ L  +++D+    E+  SDP+V +RE V EK       KSPN
Sbjct:  389 PVVTLAIEAKHTADLPRLIEVLRDISKADPSIQVDINQETGEHLISGMGELHLDVTLYRIKNDYK--VEVETSDPIVVYRETV-EKKGGPFEGKSPN 482          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.035e-32
Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VAV+ K   DLPKL+E L+++AK DP +  ++ EE+GEH++AG GELHLE+    ++ D     EI  S P+V +RE  ++K    +  KSPN
Sbjct:  390 PVVTVAVEAKHTKDLPKLIEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIERD--KNVEITTSKPIVVYRE-TIKKKTEPIEGKSPN 483          

HSP 2 Score: 78.9518 bits (193), Expect = 5.035e-32
Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNR Y+   PL+  +  AI +G I   + P++  +    E G DK+ AK I          N+ +D  KG+QYLNE  + V+ GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP
Sbjct:  484 RHNRFYISVEPLDLEIVSAIKEGEI-TMNMPELERRQKLIELGMDKEQAKGI----AGIFNSNIFIDQTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIP 604          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_NATPD (Elongation factor 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=fusA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.557e-32
Identity = 51/126 (40.48%), Postives = 69/126 (54.76%), Query Frame = 1
Query:  307 HNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETI-GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            HNR Y+   PLE+ + E I  G +   D P++  +    E G DKD A+ +     ETI   N+ +D  KG+Q+LNE  + VV G + A  +G LA E + G    + D  LH DAIHRG  QVIP
Sbjct:  486 HNRFYITVEPLEDDIVETIKMGDVS-MDMPELERREELMEQGMDKDTAQNV-----ETIHNTNVFIDDTKGIQHLNETMELVVEGLEEALNDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIP 605          

HSP 2 Score: 74.3294 bits (181), Expect = 6.557e-32
Identity = 40/98 (40.82%), Postives = 64/98 (65.31%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPNN 307
            PV+  +V+ K   DLPKL+E L+++AK DP +   + E++GEH+I+G GELHLE+  + ++ +   G  +   +P+V FRE   ++S R V  +SPNN
Sbjct:  391 PVITKSVEAKNMDDLPKLIETLQQVAKEDPTIQIEINEDTGEHLISGQGELHLEVITQRIERN--QGIPVNTGEPIVVFREAPQQES-REVEGRSPNN 485          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.557e-32
Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VAV+ K   DLPKL+E L+++AK DP +  ++ EE+GEH++AG GELHLE+    ++ D     EI  S P+V +RE  ++K    +  KSPN
Sbjct:  390 PVVTVAVEAKHTKDLPKLIEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIERD--KNVEITTSKPIVVYRE-TIKKKTEPIEGKSPN 483          

HSP 2 Score: 78.5666 bits (192), Expect = 6.557e-32
Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNR Y+ A PL+  +  AI +G +   + P++  +    + G +K+ AK I          N+ +DM KG+QYLNE  + V+ GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP
Sbjct:  484 RHNRFYIYAEPLDTEIVSAIKEGEVS-MNLPELERRQKLIDLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIP 604          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.421e-31
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VAV+ K   DLPKL+E L+++AK DP +  ++ EE+GEH++AG GELHLE+    ++ D     EI  S P+V +RE  ++K    V  KSPN
Sbjct:  390 PVVTVAVEAKHTKDLPKLIEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIERD--KNVEITTSKPIVVYRE-TIKKKIEPVEGKSPN 483          

HSP 2 Score: 75.0998 bits (183), Expect = 5.421e-31
Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNR Y+   PL+  +  AI  G I   + P++  +    + G +K+ AK I          N+ +DM KG+QYLNE  + ++ GF+   + G L  E +  +   + D  LH DAIHRG  QVIP
Sbjct:  484 RHNRFYIYVEPLDLEIVSAIKSGEIH-MNLPELERRQKLIDLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELILDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQVIP 604          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 7.058e-31
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HN+LY+   PL     + I +G I    D K  +KIL ++  WD D AKKI          N+ +D   GVQ+L EI D+++ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P
Sbjct:  490 KHNKLYISVEPLNNQTIDLIANGTIKEDMDNKEMAKILRDQAEWDYDEAKKIVAIDENI---NVFIDATSGVQHLREIMDTLLQGFRLAMKEGPLAFEPVRGVKVVLHDAVVHEDPAHRGPAQLYP 612          

HSP 2 Score: 65.4698 bits (158), Expect = 7.058e-31
Identity = 34/97 (35.05%), Postives = 65/97 (67.01%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV ++V+ +   DL K+++ L++L+  D  +V  + EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE +  KS +    KSPN
Sbjct:  396 PVVTISVEPRNPKDLTKMIDALRKLSIEDSNLVVKINEETGEYLLSGMGFLHLEVSLQLLKENY--GLDVVTTPPIVVYRESIRNKS-QVFEGKSPN 489          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.058e-31
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV VAV+ K   DLPKLVE L+++AK DP +  ++ EE+GEH++AG GELHLE+    +Q D     EI  S P+V +RE  ++K    V  KSPN
Sbjct:  390 PVVTVAVEAKHTKDLPKLVEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIQRD--KNVEITTSKPIVVYRE-TIKKKIEPVEGKSPN 483          

HSP 2 Score: 73.1738 bits (178), Expect = 7.058e-31
Identity = 44/126 (34.92%), Postives = 65/126 (51.59%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNR Y+   PL+  + E I  G I   + P++  +    E G  K+ AK I          N+ +D+ KG+QYLNE  + ++ GF+   + G L  E +  +   + D  LH DAIHRG  QVIP
Sbjct:  484 RHNRFYIYVEPLDTAIVEMIKSGDIS-MNLPELERRQKLIELGMGKEEAKGIVGIH----NSNIFIDITKGIQYLNETMELILDGFEEVMRAGPLTREPVANMKCVLVDAKLHEDAIHRGPAQVIP 604          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.197e-30
Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 1
Query:  307 HNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPLLEXSFIHPS 711
            HNR Y+   PL E + E I  G     D P++  +   +E G DKD ++ I        G N+++D  KG+Q+LNE  + V+ G + A  +G LA E ++G    + D  LH DAIHRG  QVIP +  + +H S
Sbjct:  485 HNRFYISIEPLGEDIVETIKMGEAS-MDMPELERREALQEAGMDKDDSQNI----EHIHGTNILLDETKGIQHLNETMELVIEGLEEALDDGPLASEPVQGSLIRLHDARLHEDAIHRGPAQVIPAVREA-VHNS 613          

HSP 2 Score: 71.2478 bits (173), Expect = 1.197e-30
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPNN 307
            PV+  +V+ +   DLPKL+E L+++AK DP +   + E++GEH+I+G GELHLE+  + ++ +   G  I   +P+V +RE   E S R V  +SPNN
Sbjct:  390 PVITKSVEAQNMDDLPKLIETLQQVAKEDPTIQVEINEDTGEHLISGQGELHLEVIGQRIERN--QGIPINTGEPIVVYREAPQEDS-REVEGRSPNN 484          
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.479e-30
Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSE--EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681
            +HNR Y E  PL+  + +AI+DG I      K +  I+      G D++ A+ + C      G N++ D+ +G+QYL+E  + ++  F      G LA E + G+   + D  LH D+IHRG  QVIP
Sbjct:  483 KHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKTIIETLVSKGIDREEARGLVCVE----GTNIMFDVTRGIQYLDETMELLIEAFTEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIP 606          

HSP 2 Score: 75.0998 bits (183), Expect = 4.479e-30
Identity = 39/97 (40.21%), Postives = 66/97 (68.04%), Query Frame = 2
Query:   17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN 304
            PVV +A++ K  +DLP+L++ L+ ++K+DP +   + +E+GEH+I+G GELHL++ L  +++D+    E+  S+P+V +RE V EK       KSPN
Sbjct:  389 PVVTLAIEAKHTADLPRLIDVLRDISKADPSIQVDINQETGEHLISGMGELHLDVTLYRIKNDYK--IEVETSEPIVVYRETV-EKKGGPFEGKSPN 482          
The following BLAST results are available for this feature:
BLAST of FC931933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
EF2_METBU3.866e-3238.89Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_THEAC5.035e-3237.21Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_METMA5.035e-3245.36Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_NATPD6.557e-3240.48Elongation factor 2 OS=Natronomonas pharaonis (str... [more]
EF2_METAC6.557e-3245.36Elongation factor 2 OS=Methanosarcina acetivorans ... [more]
EF2_METBF5.421e-3146.39Elongation factor 2 OS=Methanosarcina barkeri (str... [more]
EF2_SULAC7.058e-3139.68Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]
EF2_METTE7.058e-3148.45Elongation factor 2 OS=Methanosarcina thermophila ... [more]
EF2_HALMA1.197e-3037.04Elongation factor 2 OS=Haloarcula marismortui GN=f... [more]
EF2_THEVO4.479e-3034.38Elongation factor 2 OS=Thermoplasma volcanium GN=f... [more]

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Properties
Property NameValue
Genbank descriptionC34202G04EF PostHarveN Citrus clementina cDNA clone C34202G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931933 ID=FC931933; Name=FC931933; organism=Citrus clementina; type=EST; length=712bp
GAAGTTTTCCGTCTCACCTGTGGTTCGTGTGGCTGTACAGTGCAAAGTTG
CATCTGATCTCCCTAAGCTTGTTGAAGGTCTTAAACGGTTGGCCAAGTCA
GATCCCATGGTTGTCTGTTCCATGGAGGAATCTGGAGAGCATATCATTGC
CGGTGCAGGAGAACTCCATCTTGAGATCTGTTTGAAGGATTTGCAGGATG
ATTTCATGGGTGGTGCTGAGATTATCAAATCTGATCCTGTTGTGTCCTTC
CGTGAGATTGTCCTTGAGAAGTCCTGCCGTACTGTTATGAGCAAGTCTCC
AAACAACACAATCGTCTCTATATGGAAGCCCGGCCATTGGAGGAAGGTCT
TGCTGAGGCAATTGATGATGGTCGTATTGGTCCAAGGGATGATCCTAAGG
TTCGTTCTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTGCC
AAGAAAATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTTGT
GGATATGTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGTTG
TTGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAAC
ATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGATGC
TATCCACAGAGGTGGTGGCCAGGTTATTCCACTGCTAGAANGGTCATTTA
TACATCCCAGCT
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