FC931933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16 Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 1 Query: 304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---VRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPLL 687 +HN+LYM A P+EE + A +G+I D K V ++ E G +++ AKK+ NM+V+M KG+ L+E ++ ++ GF+ K G LA E +G+ ++ D H DAIHRG Q+IP + Sbjct: 487 KHNKLYMIAEPMEESVYAAYVEGKIHDEDFKKKTNVDAETRLIEAGLEREQAKKVMSI----YNGNMIVNMTKGIVQLDEARELIIEGFKEGVKGGPLASERAQGVKIKLIDATFHEDAIHRGPSQIIPAI 613 HSP 2 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN--NTIVSIWKP 331 PV+ VA++ K DLPKL+E L+++ + D V + EE+GEH+I+G GELH+E+ + + + GG E+ +P++ +RE + S + KSPN N + I +P Sbjct: 392 PVITVAIEAKNTKDLPKLIEILRQIGREDNTVRIEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIIVYRETITGTS-PEIEGKSPNKHNKLYMIAEP 497
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16 Identity = 46/129 (35.66%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRS---KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681 +HN+LYM A P++E + A +G+I D K + + E G DKD AKK+ NM+V+M +G+ L+E ++ ++ GF+ + G LA E ++G+ + D H DAIHRG Q+IP Sbjct: 487 KHNKLYMIAEPMDESVYAAYVEGKIHDEDYKKKTTADGEARLVEAGLDKDQAKKVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIP 611 HSP 2 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 42/108 (38.89%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN--NTIVSIWKP 331 PV+ VA++ K DLPKL+E L+++A+ D V + EE+GEH+I+G GELH+E+ + + + GG E+ +P+V +RE + S + KSPN N + I +P Sbjct: 392 PVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETITGTS-PEIEGKSPNKHNKLYMIAEP 497
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16 Identity = 45/129 (34.88%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRS---KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681 +HN+LYM A P+EE + A +G++ D K + + E G +KD AKK+ NM+V+M +G+ L+E ++ ++ GF+ + G LA E ++G+ ++ D H DAIHRG Q+IP Sbjct: 487 KHNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQAKKVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIKLMDATFHEDAIHRGPAQIIP 611 HSP 2 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 42/108 (38.89%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN--NTIVSIWKP 331 PV+ VA++ K DLPKL+E L+++A+ D V + EE+GEH+I+G GELH+E+ + + + GG E+ +P+V +RE ++ S + KSPN N + I +P Sbjct: 392 PVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETIMGTS-PEIEGKSPNKHNKLYMIAEP 497
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15 Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRS---KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681 +HN+LYM A P+EE + A +G++ D K + + E G +KD AKK+ NM+V+M +G+ L+E ++ ++ GF+ + G LA E ++G+ + D H DAIHRG Q+IP Sbjct: 487 KHNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQAKKVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIP 611 HSP 2 Score: 72.0182 bits (175), Expect = 3.500e-12 Identity = 42/108 (38.89%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN--NTIVSIWKP 331 PV+ VA++ K DLPKL+E L+++A+ D V + EE+GEH+I+G GELH+E+ + + + GG E+ +P+V +RE ++ S + KSPN N + I +P Sbjct: 392 PVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETIMGTS-PEIEGKSPNKHNKLYMIAEP 497
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 5 FSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKS 274 F +P+VRVAV+ ++ KLV GLK L ++DP V +E +GEHI+ AGELHLE CLKDL + F G EI S+P + +RE L S Sbjct: 673 FHFTPIVRVAVEPANPVEMSKLVRGLKLLDQADPCVHTYVENTGEHILCTAGELHLERCLKDLTERF-AGIEITHSEPAIPYRETFLSAS 761
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 38/86 (44.19%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 5 FSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIV 262 F +P+VRVAV+ K S++P+LV+G+K L ++DP V ++E+GEH++ AGE+HL+ CL DL++ F I S+P++ FRE + Sbjct: 612 FEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQVLIQETGEHVLVTAGEVHLQRCLDDLRERF-AKIHISVSEPIIPFRETI 696
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 38/86 (44.19%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 5 FSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIV 262 F +P+VRVAV+ K S++P+LV+G+K L ++DP V ++E+GEH++ AGE+HL+ CL DL++ F I S+P++ FRE + Sbjct: 612 FEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERF-AKIHISVSEPIIPFRETI 696
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 304 QHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRS---KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIP 681 +HN+LYM A P++E + A +G+I D K + + E G +K+ AK++ NM+V+M +G+ L+E ++ ++ GF+ + G LA E ++G+ + D H DAIHRG Q+IP Sbjct: 487 KHNKLYMIAEPMDESVYAAYVEGKIHDEDYKKKTTADGEARLVEAGLEKEQAKRVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIP 611 HSP 2 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 42/108 (38.89%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 17 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVLEKSCRTVMSKSPN--NTIVSIWKP 331 PV+ VA++ K DLPKL+E L+++A+ D V + EE+GEH+I+G GELH+E+ + + + GG E+ +P+V +RE + S + KSPN N + I +P Sbjct: 392 PVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETITGTS-PEIEGKSPNKHNKLYMIAEP 497
BLAST of FC931933 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12 Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 11 VSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFREIVL 265 + P+VRVA++ ++ KLV GL L ++DP V ++EE+GEH+I AGE+HLE CLKDL++ F EI S P+V +RE + Sbjct: 560 MEPIVRVALEPVRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERF-AKIEIQASQPLVPYRETTI 643 The following BLAST results are available for this feature:
BLAST of FC931933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931933 ID=FC931933; Name=FC931933; organism=Citrus clementina; type=EST; length=712bpback to top |