FC931940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 76/172 (44.19%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 152 VKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 + + ++ E LN + EE+ DPKVF++GE++G Y G+YK++KGL EKYG R+LDTPI E FTGI +GAA GL+P++E + F + A + I N+A +Y S G + P+V RGP G +GA+HSQ +++ SVPGL++++ + +A+GL+K+AIR +P++F E Sbjct: 1 MSEKLLYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTPLVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 2 Query: 158 QMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 ++++ E L ALDEEM DP V +MGE+VG Y G+YK++KG EKYG R+LDTPI E FTG+ +GAA GL+P+VE + F + A + I N+A +Y S G +PIV RGP G +GA+HSQ +++ SVPGL++++ + + +GLLK+AIR+ +PV+F E Sbjct: 3 EVLLFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIPIVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.927e-40 Identity = 79/172 (45.93%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 152 VKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 + ++ + + L +A DEEM+ DP V ++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+ +GAA GL+P+VE + +F + A + I N+A Y S G ++P+V RGP G +GA+HSQ A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E Sbjct: 1 MSKIFMFDALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40 Identity = 78/172 (45.35%), Postives = 115/172 (66.86%), Query Frame = 2 Query: 152 VKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 + +M++ E L L EEM DPKV +MGE+VG Y G+YK++KG EKYG R+LDTPI E FTG+ +GAA GL+PVVE + F + A + I N+A +Y S ++PIV RGP G +GA+HSQ +++ SVPGL++++ + +A+GL+K++IR +PV+ E Sbjct: 1 MSEMLLFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIPIVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40 Identity = 78/170 (45.88%), Postives = 114/170 (67.06%), Query Frame = 2 Query: 158 QMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 ++++ + L A DEEM D VF++GE+VG Y G+YK++K L KYG RVLDTPI E F G+ +GAA GL+P+VE + +F + A + I N+A Y S G +PIV RGP G +GA+HSQ A++ ++PGLK+++ + +A+GLLK+AIRD +PV+F E Sbjct: 3 EVLMFDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIPIVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 6.520e-40 Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = 2 Query: 158 QMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 ++++ E L L EEM DP+V +MGE+VG Y G+YK++KG E+YG R+LDTPI E FTG+ +GAA GL+PVVE + F + A + I N+A +Y S G ++PIV RGP G +GA+HSQ +++ SVPGL++++ + +A+GL+K+AIR +P++ E Sbjct: 3 EVLLFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIPIVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.520e-39 Identity = 78/172 (45.35%), Postives = 116/172 (67.44%), Query Frame = 2 Query: 152 VKQMMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 + ++ + + L +A DEEM D V ++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+ +GAA GL+P+VE + +F + A + I N+A Y S G ++P+V RGP G +GA+HSQ A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E Sbjct: 1 MSKVFMFDALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 2 Query: 161 MMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 M + + LN ALDEEM+ DP+V ++GE+VG+ G + +++GLL+KYGP+RV+DTP++EA G +G A +GL+PV E ++ D +++ AK Y S GQ + P+V R P+G G HSQ A + GLKV++ + DA+GLLKAAIRD DPVVFLE Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 2 Query: 161 MMVRETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 M + + LN ALDEEM+ DP+V ++GE+VG+ G + +++GLL+KYGP+RV+DTP++EA G +G A +GL+PV E ++ D +++ AK Y S GQ + P+V R P+G G HSQ A + GLKV++ + DA+GLLKAAIRD DPVVFLE Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLE 172
BLAST of FC931940 vs. ExPASy Swiss-Prot
Match: ODBB_BACSU (2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis GN=bfmBAB PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38 Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 2 Query: 173 ETLNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFVTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 667 + +N A+ EEM D +VF++GE+VG G +K + GL E++G ERV+DTP+ E+ G+G+GAA YG++P+ E +F M A++ II+ AAK Y S+ S PIV R P G HSQ A +A+ PGLK++ P + DA+GLLKAA+RD DPV+F E Sbjct: 8 DAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGVHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFE 172 The following BLAST results are available for this feature:
BLAST of FC931940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931940 ID=FC931940; Name=FC931940; organism=Citrus clementina; type=EST; length=694bpback to top |