FC931948

Overview
NameFC931948
Unique NameFC931948
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAK3_HUMAN (Serine/threonine-protein kinase PAK 3 OS=Homo sapiens GN=PAK3 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.715e-35
Identity = 86/214 (40.19%), Postives = 124/214 (57.94%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y  +E++G+G S TVY AL I   + VAIK ++L++     + I  E+  MR   +PN++    S+  G  LWVVM Y+AGGS   ++        +E  IA + RE L+AL +LH +  IHRD+K+ NIL+  +G++KL DFG  A        Q  R+T VGTP WMAPEV+ +   Y  K DIWS GI A+E+  G  P+    P++ L +
Sbjct:  283 YTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL 488          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAKC_DICDI (Serine/threonine-protein kinase pakC OS=Dictyostelium discoideum GN=pakC PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.546e-35
Identity = 82/215 (38.14%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHC-LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y+   ++GEG +  V+ A     N+ VAIK +++   N  L  +  E+  M+ ++H N++    S+      LWV M +M GG    I+++       E  IA +++ETLKAL Y+H    IHRD+K+ NIL+ S G++K+ADFG +A       +Q+ RNT VGTP WMAPE+++  H Y  K DIWS GI  +E+A G  P+  +PP++ L +
Sbjct:  220 YKNMTKIGEGAAGEVFVATSSKNNKRVAIKKIEINNDNAKL--LVTEIAIMKTSHHDNIVNYIDSYIVNDRELWVAMEFMGGGCLTDILEAFDNIKMSEIQIAYVVKETLKALQYIHSLHRIHRDIKSDNILLGSEGSVKIADFGYAA---QLTQKQQKRNTVVGTPYWMAPELIRG-HDYGVKVDIWSLGIMMMEMAEGEPPYMDFPPLRALFL 428          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: M4K3_MOUSE (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Mus musculus GN=Map4k3 PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 3.546e-35
Identity = 85/218 (38.99%), Postives = 122/218 (55.96%), Query Frame = 3
Query:   21 QDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEV--MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            +D+ L + +G G    VY+A  +   E+ AIKV+ LE    D   +++E+  M+   HPN++    S+     LW+ M +  GGS   I     P    E  IA + RETL+ L YLH  G +HRD+K  NIL+  NG +KLADFGVSA +     +   R +F+GTP WMAPEV  +++  GY+   D+W+ GITA+ELA    P     PM+ L +
Sbjct:   14 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGP--LSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK---RKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAELQPPMFDLHPMRALFL 225          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: M4K3_HUMAN (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Homo sapiens GN=MAP4K3 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.546e-35
Identity = 85/218 (38.99%), Postives = 122/218 (55.96%), Query Frame = 3
Query:   21 QDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEV--MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            +D+ L + +G G    VY+A  +   E+ AIKV+ LE    D   +++E+  M+   HPN++    S+     LW+ M +  GGS   I     P    E  IA + RETL+ L YLH  G +HRD+K  NIL+  NG +KLADFGVSA +     +   R +F+GTP WMAPEV  +++  GY+   D+W+ GITA+ELA    P     PM+ L +
Sbjct:   14 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGP--LSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK---RKSFIGTPYWMAPEVAAVERKGGYNQLCDLWAVGITAIELAELQPPMFDLHPMRALFL 225          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STK4L_DICDI (Serine/threonine-protein kinase 4 homolog B OS=Dictyostelium discoideum GN=krsB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.631e-35
Identity = 85/215 (39.53%), Postives = 122/215 (56.74%), Query Frame = 3
Query:   24 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            ++ L E +G G   +VY+A       IVA+K++ +   N D   I +E+  M+      V++ + ++      W++M Y A GS   +M         E  IA +   TLK L YLH +  IHRD+K GNIL+   G  KLADFGVS       +R R RNT +GTP ++APEV+Q++ GYD KADIW+ GI+A+E+A  H P+    PM+VL M
Sbjct:   22 EFDLIECLGRGSFGSVYKATYKKTGNIVAVKLVPI---NEDFQEILKEINIMKQCKSKYVVQYYGNYFKDETCWIIMEYCAFGSVSDMMNITN-RVLNEEQIALVCYSTLKGLYYLHRNSKIHRDIKPGNILVSEEGECKLADFGVSG---QLSERTRKRNTVIGTPFFLAPEVIQEV-GYDNKADIWALGISAIEMAEFHPPYHDLHPMRVLFM 228          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAK1_RAT (Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus GN=Pak1 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 6.048e-35
Identity = 84/214 (39.25%), Postives = 124/214 (57.94%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y  +E++G+G S TVY A+ +   + VAIK ++L++     + I  E+  MR   +PN++    S+  G  LWVVM Y+AGGS   ++        +E  IA + RE L+AL +LH +  IHRD+K+ NIL+  +G++KL DFG  A        Q  R+T VGTP WMAPEV+ +   Y  K DIWS GI A+E+  G  P+    P++ L +
Sbjct:  269 YTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 474          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAK1_HUMAN (Serine/threonine-protein kinase PAK 1 OS=Homo sapiens GN=PAK1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.048e-35
Identity = 84/214 (39.25%), Postives = 124/214 (57.94%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y  +E++G+G S TVY A+ +   + VAIK ++L++     + I  E+  MR   +PN++    S+  G  LWVVM Y+AGGS   ++        +E  IA + RE L+AL +LH +  IHRD+K+ NIL+  +G++KL DFG  A        Q  R+T VGTP WMAPEV+ +   Y  K DIWS GI A+E+  G  P+    P++ L +
Sbjct:  270 YTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 475          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAK1_BOVIN (Serine/threonine-protein kinase PAK 1 OS=Bos taurus GN=PAK1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.048e-35
Identity = 84/214 (39.25%), Postives = 124/214 (57.94%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y  +E++G+G S TVY A+ +   + VAIK ++L++     + I  E+  MR   +PN++    S+  G  LWVVM Y+AGGS   ++        +E  IA + RE L+AL +LH +  IHRD+K+ NIL+  +G++KL DFG  A        Q  R+T VGTP WMAPEV+ +   Y  K DIWS GI A+E+  G  P+    P++ L +
Sbjct:  269 YTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 474          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAKB_DICDI (Serine/threonine-protein kinase pakB OS=Dictyostelium discoideum GN=pakB PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.899e-35
Identity = 81/209 (38.76%), Postives = 118/209 (56.46%), Query Frame = 3
Query:   42 EVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            ++GEG +  V+    +  N  VAIK + L + N  L  I  E+  M+   H N++    S+  G  LWV M +M GG    I++        E  IA +  ETLK L Y+H    IHRD+K+ NIL+ S+G++KLADFG +A +  +  +   R T VGTP WMAPE+++    YD K DIWS GI A+E+A    P+  +PP++ L +
Sbjct:  575 KIGEGAAGEVFVVTQLKTNNKVAIKKMPLNQQNMKL--IVTEIGIMKSCRHQNIIDYIDSYLVGDSLWVAMEFMGGGCLTEILEQFNSVKLVEAQIAYVCAETLKGLAYIHSQHRIHRDIKSDNILLGSDGSVKLADFGYAAQLTKSKQK---RVTIVGTPYWMAPELIRG-QNYDRKVDIWSLGIMAMEMAESEPPYMSFPPLRALFL 777          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAK1_MOUSE (Serine/threonine-protein kinase PAK 1 OS=Mus musculus GN=Pak1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.899e-35
Identity = 84/214 (39.25%), Postives = 124/214 (57.94%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y  +E++G+G S TVY A+ +   + VAIK ++L++     + I  E+  MR   +PN++    S+  G  LWVVM Y+AGGS   ++        +E  IA + RE L+AL +LH +  IHRD+K+ NIL+  +G++KL DFG  A        Q  R+T VGTP WMAPEV+ +   Y  K DIWS GI A+E+  G  P+    P++ L +
Sbjct:  270 YTPFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 475          
The following BLAST results are available for this feature:
BLAST of FC931948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PAK3_HUMAN2.715e-3540.19Serine/threonine-protein kinase PAK 3 OS=Homo sapi... [more]
PAKC_DICDI3.546e-3538.14Serine/threonine-protein kinase pakC OS=Dictyostel... [more]
M4K3_MOUSE3.546e-3538.99Mitogen-activated protein kinase kinase kinase kin... [more]
M4K3_HUMAN3.546e-3538.99Mitogen-activated protein kinase kinase kinase kin... [more]
STK4L_DICDI4.631e-3539.53Serine/threonine-protein kinase 4 homolog B OS=Dic... [more]
PAK1_RAT6.048e-3539.25Serine/threonine-protein kinase PAK 1 OS=Rattus no... [more]
PAK1_HUMAN6.048e-3539.25Serine/threonine-protein kinase PAK 1 OS=Homo sapi... [more]
PAK1_BOVIN6.048e-3539.25Serine/threonine-protein kinase PAK 1 OS=Bos tauru... [more]
PAKB_DICDI7.899e-3538.76Serine/threonine-protein kinase pakB OS=Dictyostel... [more]
PAK1_MOUSE7.899e-3539.25Serine/threonine-protein kinase PAK 1 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionC34202H07EF PostHarveN Citrus clementina cDNA clone C34202H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931948 ID=FC931948; Name=FC931948; organism=Citrus clementina; type=EST; length=681bp
AACGGTTTCCTGTTGATGCACAAGACTATAGGTTATATGAAGAAGTTGGT
GAAGGAGTCAGCGCCACTGTCTACAGGGCTCTCTGCATTCCACTTAATGA
AATAGTAGCTATCAAGGTTCTTGATCTGGAAAAGTGCAATAATGACTTAG
ATGGTATTAGGCGAGAGGTGCAAACCATGAGAGTGACTAATCATCCTAAT
GTATTAAGGGCCCATTGCTCTTTCACTACGGGTCATTGCCTTTGGGTTGT
GATGCCATACATGGCAGGGGGATCCTGTCTTCATATAATGAAATCAGCAT
ATCCAGAGGGTTTTGAAGAGCCTGTTATTGCAACGTTGTTGCGTGAGACC
CTCAAAGCTCTAGTTTATCTCCATTTCCATGGGCATATCCATAGAGATGT
GAAGGCTGGAAATATTTTAATTGATTCTAATGGTGCGATCAAGTTAGCAG
ACTTTGGTGTATCAGCATGCATGTTTGATGCTGGAGATAGGCAACGTTTC
AGAAATACTTTTGTTGGAACTCCATGCTGGATGGCTCCTGAAGTTATGCA
GCAATTGCATGGATATGACTTTAAAGCAGATATCTGGTCATTTGGAATAA
CAGCATTGGAACTCGCTCATGGGCATGCCCCCTTTTCGAAGTATCCACCA
ATGAAAGTTTTGTTGATGACCTTACAAATGC
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