FC931948

Overview
NameFC931948
Unique NameFC931948
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: MINK1_MOUSE (Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33
Identity = 81/225 (36.00%), Postives = 125/225 (55.56%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSFT------TGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHG----YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            + L E VG G    VY+   +   ++ AIKV+D+ +  ++ + I++E+  ++  ++H N+   + +F           LW+VM +   GS   ++K+      +E  IA + RE L+ L +LH H  IHRD+K  N+L+  N  +KL DFGVSA +     R   RNTF+GTP WMAPEV+         YD+++DIWS GITA+E+A G  P     PM+ L +
Sbjct:   25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 244          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: MINK1_HUMAN (Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.490e-33
Identity = 81/225 (36.00%), Postives = 125/225 (55.56%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSFT------TGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHG----YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            + L E VG G    VY+   +   ++ AIKV+D+ +  ++ + I++E+  ++  ++H N+   + +F           LW+VM +   GS   ++K+      +E  IA + RE L+ L +LH H  IHRD+K  N+L+  N  +KL DFGVSA +     R   RNTF+GTP WMAPEV+         YD+++DIWS GITA+E+A G  P     PM+ L +
Sbjct:   25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 244          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: KIC1_YEAST (Serine/threonine-protein kinase KIC1 OS=Saccharomyces cerevisiae GN=KIC1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.541e-33
Identity = 76/218 (34.86%), Postives = 123/218 (56.42%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH-PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 677
            ++  E +G G    VY+   +    + AIKVL+L+  +++++ ++RE+Q +       N+ R + S+     LW++M + AGGS   +++   P   +E  I  ++RE L AL  +H    IHRD+KA N+LI + G +KL DFGV+A +     R   R T  GTP WMAPEV+ +   YD K DIWS GIT  E+A G+ P+     ++ + + ++
Sbjct:   23 FKRTEVIGRGKFGVVYKGYNVKTGRVYAIKVLNLDSDSDEVEDVQREIQFLASLKQISNITRYYGSYLKDTSLWIIMEHCAGGSLRSLLR---PGKIDEKYIGVIMRELLVALKCIHKDNVIHRDIKAANVLITNEGNVKLCDFGVAAQVNQTSLR---RQTMAGTPYWMAPEVIMEGVYYDTKVDIWSLGITTYEIATGNPPYCDVEALRAMQLIIK 234          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STRAB_HUMAN (STE20-related kinase adapter protein beta OS=Homo sapiens GN=STRADB PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.318e-33
Identity = 81/225 (36.00%), Postives = 121/225 (53.78%), Query Frame = 3
Query:   27 YRLYEEVGEGVS--ATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQR----FRNTFVGTPCWMAPEVMQQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 677
            Y L  E+G G     +V+ A   P   +V IK+ +LE CN + L  +++ V       HPN+      FT G  LWV+ P+MA GS   ++++ +PEG  E +I  +L   ++ L YLH +G IHR +KA +ILI  +G + L+       +   G R R    F         W++PE+++Q LHGY+ K+DI+S GITA ELA G  PF      ++LL  L+
Sbjct:   58 YELQVEIGRGFDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFRHPNITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPEGMSETLIRNILFGAVRGLNYLHQNGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPELLRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLK 282          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STE20_USTMA (Serine/threonine-protein kinase SMU1 OS=Ustilago maydis GN=SMU1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.318e-33
Identity = 85/214 (39.72%), Postives = 117/214 (54.67%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            YR  +++G+G S  V+ A  +  N  VAIK ++LE+     D I  E+  M+ + H N++    SF     LWVVM YM GGS   ++         E  IA + RE L+ L +LH HG IHRD+K+ N+L+   G IKL DFG  A     G+ Q  R T VGTP WMAPEV+ +   Y  K DIWS GI  +E+  G  P+    P++ L +
Sbjct:  472 YRSLQKIGQGASGGVFTAYQVGTNVSVAIKQMNLEQ-QPKKDLIINEILVMKESRHRNIVNFIDSFLFKGDLWVVMEYMEGGSLTDVVTCNI---MTEGQIAAVSREVLEGLRHLHQHGVIHRDIKSDNVLLSLQGDIKLTDFGFCA---QIGESQAKRTTMVGTPYWMAPEVVTRKE-YGPKVDIWSLGIMCIEMVEGEPPYLNENPLRALYL 677          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STE20_PENMA (Serine/threonine-protein kinase pakA OS=Penicillium marneffei GN=pakA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.334e-33
Identity = 86/214 (40.19%), Postives = 116/214 (54.21%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y    ++G+G S  V+ A     N+ VAIK ++L+      D I  E+  M+ + H N++    S+  G  LWVVM YM GGS   ++         E  IA + RETL  L +LH  G IHRD+K+ NIL+  +G IKL DFG  A      D Q  RNT VGTP WMAPEV+ +   Y  K DIWS GI A+E+  G  P+    P++ L +
Sbjct:  361 YYNLNKIGQGASGGVFTAYETNTNKCVAIKQMNLD-LQPKKDLIINEILVMKDSKHKNIVNFLDSYLHGLDLWVVMEYMEGGSLTDVVTFNI---MSEGQIAAVCRETLSGLQHLHSKGVIHRDIKSDNILLSMDGEIKLTDFGFCA---QINDSQNKRNTMVGTPYWMAPEVVTRKE-YGRKVDIWSLGIMAIEMIEGEPPYLTESPLRALYL 566          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: TNIK_MOUSE (Traf2 and NCK-interacting protein kinase OS=Mus musculus GN=Tnik PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 82/225 (36.44%), Postives = 125/225 (55.56%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSFTTGHC------LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHG----YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            + L E VG G    VY+   +   ++ AIKV+D+    ++ + I++E+  ++  ++H N+   + +F   +       LW+VM +   GS   ++K+      +E  IA + RE L+ L +LH H  IHRD+K  N+L+  N  +KL DFGVSA +     R   RNTF+GTP WMAPEV+         YDFK+D+WS GITA+E+A G  P     PM+ L +
Sbjct:   25 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 244          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: TNIK_HUMAN (TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 82/225 (36.44%), Postives = 125/225 (55.56%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSFTTGHC------LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHG----YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            + L E VG G    VY+   +   ++ AIKV+D+    ++ + I++E+  ++  ++H N+   + +F   +       LW+VM +   GS   ++K+      +E  IA + RE L+ L +LH H  IHRD+K  N+L+  N  +KL DFGVSA +     R   RNTF+GTP WMAPEV+         YDFK+D+WS GITA+E+A G  P     PM+ L +
Sbjct:   25 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 244          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STRAA_RAT (STE20-related kinase adapter protein alpha OS=Rattus norvegicus GN=Strada PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 80/223 (35.87%), Postives = 128/223 (57.40%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATV-YRALCIPLNEIVAIKVLDLEKCNNDL-DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTF----VGTPCWMAPEVMQQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 674
            Y L   +G+G    +   +   P  E V ++ ++LE C+N++   ++ E+   ++ +HPN++    +F   + LW V  +MA GS   ++ + + +G  E  IA +L+  LKAL Y+H  G++HR VKA +ILI ++G + L+    +  M   G RQR  + F    +    W++PEV+QQ L GYD K+DI+S GITA ELA+GH PF   P  ++LL  L
Sbjct:   32 YELLSVIGKGFEDLMTVNSRYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNIVPYRATFIADNELWAVTSFMAYGSAKDLIGTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISTDGKVYLSGLRSNLSMISHGQRQRAVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL 254          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STRAA_CHICK (STE20-related kinase adapter protein alpha OS=Gallus gallus GN=STRADA PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 84/231 (36.36%), Postives = 129/231 (55.84%), Query Frame = 3
Query:    6 FPVDAQDYRLYEEVGEGVS--ATVYRALCIPLNEIVAIKVLDLEKCNNDL-DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTF----VGTPCWMAPEVMQQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 674
            F  D+  Y L   +G G      V  A   P  E V ++ ++LE C N++   ++ E+   ++ NHPN++    +F   + LWVV  +MA GS   ++ + + +G  E  IA +L+  LKAL Y+H  G++HR VKA +ILI  +G + L+    +  M + G R +  + F    +    W++PEV+QQ L GYD K+DI+S GITA ELA+GH PF   P  ++LL  L
Sbjct:    4 FLPDSSCYELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKL 234          
The following BLAST results are available for this feature:
BLAST of FC931948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MINK1_MOUSE1.490e-3336.00Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 P... [more]
MINK1_HUMAN1.490e-3336.00Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 P... [more]
KIC1_YEAST2.541e-3334.86Serine/threonine-protein kinase KIC1 OS=Saccharomy... [more]
STRAB_HUMAN3.318e-3336.00STE20-related kinase adapter protein beta OS=Homo ... [more]
STE20_USTMA3.318e-3339.72Serine/threonine-protein kinase SMU1 OS=Ustilago m... [more]
STE20_PENMA4.334e-3340.19Serine/threonine-protein kinase pakA OS=Penicilliu... [more]
TNIK_MOUSE5.660e-3336.44Traf2 and NCK-interacting protein kinase OS=Mus mu... [more]
TNIK_HUMAN5.660e-3336.44TRAF2 and NCK-interacting protein kinase OS=Homo s... [more]
STRAA_RAT5.660e-3335.87STE20-related kinase adapter protein alpha OS=Ratt... [more]
STRAA_CHICK5.660e-3336.36STE20-related kinase adapter protein alpha OS=Gall... [more]

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Properties
Property NameValue
Genbank descriptionC34202H07EF PostHarveN Citrus clementina cDNA clone C34202H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931948 ID=FC931948; Name=FC931948; organism=Citrus clementina; type=EST; length=681bp
AACGGTTTCCTGTTGATGCACAAGACTATAGGTTATATGAAGAAGTTGGT
GAAGGAGTCAGCGCCACTGTCTACAGGGCTCTCTGCATTCCACTTAATGA
AATAGTAGCTATCAAGGTTCTTGATCTGGAAAAGTGCAATAATGACTTAG
ATGGTATTAGGCGAGAGGTGCAAACCATGAGAGTGACTAATCATCCTAAT
GTATTAAGGGCCCATTGCTCTTTCACTACGGGTCATTGCCTTTGGGTTGT
GATGCCATACATGGCAGGGGGATCCTGTCTTCATATAATGAAATCAGCAT
ATCCAGAGGGTTTTGAAGAGCCTGTTATTGCAACGTTGTTGCGTGAGACC
CTCAAAGCTCTAGTTTATCTCCATTTCCATGGGCATATCCATAGAGATGT
GAAGGCTGGAAATATTTTAATTGATTCTAATGGTGCGATCAAGTTAGCAG
ACTTTGGTGTATCAGCATGCATGTTTGATGCTGGAGATAGGCAACGTTTC
AGAAATACTTTTGTTGGAACTCCATGCTGGATGGCTCCTGAAGTTATGCA
GCAATTGCATGGATATGACTTTAAAGCAGATATCTGGTCATTTGGAATAA
CAGCATTGGAACTCGCTCATGGGCATGCCCCCTTTTCGAAGTATCCACCA
ATGAAAGTTTTGTTGATGACCTTACAAATGC
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