FC931948

Overview
NameFC931948
Unique NameFC931948
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: SLK_RAT (STE20-like serine/threonine-protein kinase OS=Rattus norvegicus GN=Slk PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 84/217 (38.71%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVM----QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 665
            + +  E+G+G    VY+A     N + A KV+D  K   +L+    E+  +   +HPN+++   +F   + LW+++ + AGG+   +M         E  I  + ++TL+AL YLH +  IHRD+KAGNIL   +G IKLADFGVSA       R   R++F+GTP WMAPEV+     +   YD+KAD+WS GIT +E+A    P  +  PM+VLL
Sbjct:   34 WEIIGELGDGAFGKVYKAQNKETNVLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 245          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: SLK_MOUSE (STE20-like serine/threonine-protein kinase OS=Mus musculus GN=Slk PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 84/217 (38.71%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVM----QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 665
            + +  E+G+G    VY+A     N + A KV+D  K   +L+    E+  +   +HPN+++   +F   + LW+++ + AGG+   +M         E  I  + ++TL+AL YLH +  IHRD+KAGNIL   +G IKLADFGVSA       R   R++F+GTP WMAPEV+     +   YD+KAD+WS GIT +E+A    P  +  PM+VLL
Sbjct:   34 WEIIGELGDGAFGKVYKAQNKETNVLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 245          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: SLK_CAVPO (STE20-like serine/threonine-protein kinase OS=Cavia porcellus GN=SLK PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.393e-33
Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 3
Query:   42 EVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVM----QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 665
            E+G+G    VY+A     N + A KV+D  K   +L+    E+  +   +HPN+++   +F   + LW+++ + AGG+   +M         E  I  + ++TL+AL YLH +  IHRD+KAGNIL   +G IKLADFGVSA       R   R++F+GTP WMAPEV+     +   YD+KAD+WS GIT +E+A    P  +  PM+VLL
Sbjct:   39 ELGDGAFGKVYKAQNKETNVLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLEALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 245          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAKF_DICDI (Serine/threonine-protein kinase pakF OS=Dictyostelium discoideum GN=pakF PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.393e-33
Identity = 78/215 (36.28%), Postives = 127/215 (59.07%), Query Frame = 3
Query:   24 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            D+ L E++G+G   +VY+     L   +AIKV+++++  ++   ++ E+  ++    PN++    S  T   +W+++ + A GS   I++S   +   E  I+ +++ TLK L+YLH    IHRDVKA N+L+     +K+ADFGVS  +  A D+ +     +GTP WMAPEV+ +   YD+KADIWS GIT +E+A G  P    PPM+ + M
Sbjct:  393 DFILDEKLGDGAYGSVYKGTHKDLGFTLAIKVIEMKE--SESVSLQNEINILKNCKSPNIVSYFGSLQTESHIWILLDFCALGSIRDIIEST-EKTLNEAQISFVVKNTLKGLIYLHSQNIIHRDVKAANVLLSEGCDVKIADFGVSEKLNGALDQSK---EMIGTPLWMAPEVILK-KNYDYKADIWSLGITIIEMADGLPPHIDLPPMRAMKM 600          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: M4K4_HUMAN (Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 7.393e-33
Identity = 82/225 (36.44%), Postives = 126/225 (56.00%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSFTT----GHC--LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHG----YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            + L E VG G    VY+   +   ++ AIKV+D+ +  ++ + I+ E+  ++  ++H N+   + +F      GH   LW+VM +   GS   ++K+      +E  IA + RE L+ L +LH H  IHRD+K  N+L+  N  +KL DFGVSA +     R   RNTF+GTP WMAPEV+         YD+++D+WS GITA+E+A G  P     PM+ L +
Sbjct:   25 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFL 244          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: PAKM_DROME (Serine/threonine-protein kinase PAK mbt OS=Drosophila melanogaster GN=mbt PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.261e-32
Identity = 80/209 (38.28%), Postives = 118/209 (56.46%), Query Frame = 3
Query:   36 YEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL 662
            + ++GEG + TV  A        VA+K +DL K     + +  EV  MR  +HPN++  + SF     LWVVM Y+ GG+   I+  +     +E  IAT+ ++ LKAL YLH  G IHRD+K+ +IL+ ++G +KL+DFG  A           R + VGTP WM+PEV+ +L  Y  + DIWS GI  +E+  G  PF   PP++ +
Sbjct:  371 FNKIGEGSTGTVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHPNIVETYSSFLVNDELWVVMEYLEGGALTDIVTHSR---MDEEQIATVCKQCLKALAYLHSQGVIHRDIKSDSILLAADGRVKLSDFGFCA---QVSQELPKRKSLVGTPYWMSPEVISRL-PYGPEVDIWSLGIMVIEMVDGEPPFFNEPPLQAM 571          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: MYO3A_MOUSE (Myosin-IIIa OS=Mus musculus GN=Myo3a PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.261e-32
Identity = 92/232 (39.66%), Postives = 129/232 (55.60%), Query Frame = 3
Query:    6 FPVDAQDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-IRREVQTMR-VTNHPNVLRAHCSF-----TTGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVM---QQLH-GYDFKADIWSFGITALELAHGHAPFSKYPPMKVL 662
            FP  +  + + E +G+G    V++ L     +  A+K+LD     +D+D  I  E   +R +++HPNV+R +  +       G  LW+V+    GGS   ++K     G    EPVIA +L E L  L +LH +  IHRDVK  NIL+ + G +KL DFGVSA +  +  R R  NT VGTP WMAPEV+   QQL   YD + D WS GITA+EL  G  P ++  PM+ L
Sbjct:   14 FPDPSDTWEIIETIGKGTYGKVFKVLNKKSGQKAAVKILDPI---HDIDEEIEAEYNILRTLSDHPNVVRFYGIYFKKDKINGDKLWLVLELCNGGSVTDLVKGFLKRGERMSEPVIAYILHEALMGLQHLHSNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQL--SSTRHRL-NTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLAELHPMRAL 239          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: CLA4_CANAL (Serine/threonine-protein kinase CLA4 OS=Candida albicans GN=CLA4 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.261e-32
Identity = 85/216 (39.35%), Postives = 125/216 (57.87%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIP-LNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTG-HCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            +R+ E+ G+G S  VY A  I   N  +AIK +DL+      + I  E+  M+ + H N++    S+  G + LWV+M YM GGS   I+++   +   E  IAT+  ETLK L +LH    IHRD+K+ N+L+D+ G +K+ DFG  A + D  ++   R T VGTP WMAPEV++Q   YD K D+WS GI  +E+  G  P+    P+K L +
Sbjct:  680 FRIVEKAGQGASGNVYLAEMIKDNNRKIAIKQMDLD-AQPRKELIINEILVMKDSQHKNIVNFLDSYLIGDNELWVIMEYMQGGSLTEIIENNDFK-LNEKQIATICFETLKGLQHLHKKHIIHRDIKSDNVLLDAYGNVKITDFGFCAKLTDQRNK---RATMVGTPYWMAPEVVKQKE-YDEKVDVWSLGIMTIEMIEGEPPYLNEEPLKALYL 889          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STRAB_MOUSE (STE20-related kinase adapter protein beta OS=Mus musculus GN=Stradb PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.647e-32
Identity = 80/229 (34.93%), Postives = 120/229 (52.40%), Query Frame = 3
Query:   15 DAQDYRLYEEVGEGVS--ATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQR----FRNTFVGTPCWMAPEVMQQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 677
            D   Y L  E+G G     +V+ A   P   +V +K+ +LE C  + L  ++R V       HPN+      FT G  LWV+ P+MA GS   ++++ +P+G  E +I  +L   ++ L YLH +G IHR  KA +ILI  +G + L+       +   G R R    F         W++PE+++Q LHGY+ K+DI+S GITA ELA G  PF      ++LL  L+
Sbjct:   54 DVSHYELQVEIGRGFDNLTSVHLARHTPTGTLVTVKITNLESCTEERLKALQRAVILSHFFQHPNITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPDGMSETLIRNILFGAVQGLNYLHQNGCIHRSFKASHILISGDGLVTLSGLSHLHSLLKHGQRHRAVFDFPQFSTSVQPWLSPELLRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLK 282          
BLAST of FC931948 vs. ExPASy Swiss-Prot
Match: STE20_ASPFU (Serine/threonine-protein kinase ste20 OS=Aspergillus fumigatus GN=ste20 PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.647e-32
Identity = 86/214 (40.19%), Postives = 115/214 (53.74%), Query Frame = 3
Query:   27 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRFRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 668
            Y    ++G+G S  VY A     N  VAIK ++L+      + I  E+  M+ + H N++    S+  G  LWVVM YM GGS   ++         E  IA + RETL  L +LH  G IHRD+K+ NIL+  +G IKL DFG  A      D Q  RNT VGTP WMAPEV+ +   Y  K DIWS GI A+E+  G  P+    P++ L +
Sbjct:  534 YYNLNKIGQGASGGVYTAYQHGTNNCVAIKQMNLD-LQPKKELIINEILVMKDSKHKNIVNFLDSYLHGLDLWVVMEYMEGGSLTDVVTFNI---MTEGQIAAVCRETLNGLQHLHSKGVIHRDIKSDNILLSLDGNIKLTDFGFCA---QINDSQNKRNTMVGTPYWMAPEVVTRKE-YGRKVDIWSLGIMAIEMIEGEPPYLTESPLRALYL 739          
The following BLAST results are available for this feature:
BLAST of FC931948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SLK_RAT5.660e-3338.71STE20-like serine/threonine-protein kinase OS=Ratt... [more]
SLK_MOUSE5.660e-3338.71STE20-like serine/threonine-protein kinase OS=Mus ... [more]
SLK_CAVPO7.393e-3339.62STE20-like serine/threonine-protein kinase OS=Cavi... [more]
PAKF_DICDI7.393e-3336.28Serine/threonine-protein kinase pakF OS=Dictyostel... [more]
M4K4_HUMAN7.393e-3336.44Mitogen-activated protein kinase kinase kinase kin... [more]
PAKM_DROME1.261e-3238.28Serine/threonine-protein kinase PAK mbt OS=Drosoph... [more]
MYO3A_MOUSE1.261e-3239.66Myosin-IIIa OS=Mus musculus GN=Myo3a PE=2 SV=1[more]
CLA4_CANAL1.261e-3239.35Serine/threonine-protein kinase CLA4 OS=Candida al... [more]
STRAB_MOUSE1.647e-3234.93STE20-related kinase adapter protein beta OS=Mus m... [more]
STE20_ASPFU1.647e-3240.19Serine/threonine-protein kinase ste20 OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionC34202H07EF PostHarveN Citrus clementina cDNA clone C34202H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931948 ID=FC931948; Name=FC931948; organism=Citrus clementina; type=EST; length=681bp
AACGGTTTCCTGTTGATGCACAAGACTATAGGTTATATGAAGAAGTTGGT
GAAGGAGTCAGCGCCACTGTCTACAGGGCTCTCTGCATTCCACTTAATGA
AATAGTAGCTATCAAGGTTCTTGATCTGGAAAAGTGCAATAATGACTTAG
ATGGTATTAGGCGAGAGGTGCAAACCATGAGAGTGACTAATCATCCTAAT
GTATTAAGGGCCCATTGCTCTTTCACTACGGGTCATTGCCTTTGGGTTGT
GATGCCATACATGGCAGGGGGATCCTGTCTTCATATAATGAAATCAGCAT
ATCCAGAGGGTTTTGAAGAGCCTGTTATTGCAACGTTGTTGCGTGAGACC
CTCAAAGCTCTAGTTTATCTCCATTTCCATGGGCATATCCATAGAGATGT
GAAGGCTGGAAATATTTTAATTGATTCTAATGGTGCGATCAAGTTAGCAG
ACTTTGGTGTATCAGCATGCATGTTTGATGCTGGAGATAGGCAACGTTTC
AGAAATACTTTTGTTGGAACTCCATGCTGGATGGCTCCTGAAGTTATGCA
GCAATTGCATGGATATGACTTTAAAGCAGATATCTGGTCATTTGGAATAA
CAGCATTGGAACTCGCTCATGGGCATGCCCCCTTTTCGAAGTATCCACCA
ATGAAAGTTTTGTTGATGACCTTACAAATGC
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