FC931951

Overview
NameFC931951
Unique NameFC931951
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: DLDH_DICDI (Dihydrolipoyl dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=lpd PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 65/206 (31.55%), Postives = 101/206 (49.03%), Query Frame = 2
Query:   95 IDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVIT-------DHGEEIVADVVLFATGRAPNTKG 685
            ++ D   ++Q K   +  L    + L     VK  +G GKI GPN VEVT  DG+  +   K+I+IATGS     P     +E  I+S  AL+L+ +PK+ +V+GGG I +E  S+W  +GS   ++        G D E+     ++LE + +  H  T +  ++K  +    +T            + AD VL + GR PNT G
Sbjct:   96 VELDLGAMMQYKDKSVSGLTSGIEGLFKKNKVKYDKGFGKITGPNTVEVTLNDGSVKTIETKNIVIATGSEVTSLPNVNIDEESIISSTGALALKSVPKKLIVIGGGVIGLELGSVWSRLGSETTVVEFTNRIAAGADGEVAKKFQKSLEKQHMKFHLETKVTSVVKKSDGKVTVTVEQVGAGGFTGTLEADAVLVSVGRRPNTSG 301          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: DLDH_PEA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 72/234 (30.77%), Postives = 122/234 (52.14%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDA-RSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP--IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD---HGEE--IVADVVLFATGRAPNTKG 685
            P K L++ +    E + +  ++G +V   ++ D   ++ +K   +  L    + L     V   +G GK V P+E+ V  ++G       KHI+IATGS  +  P     ++  ++S  AL+L E+PK+ VV+G GYI +E  S+W  +GS V ++ F  E+ +   D E+R    R+LE +G+    +T +  +  S + +K+  +    GE+  I ADVVL + GR P T G
Sbjct:   83 PSKALLHSSHMYHEAKHSFANHGVKV-SNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI-VPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSG 314          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHR_DEBHA (Glutathione reductase OS=Debaryomyces hansenii GN=GLR1 PE=3 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 74/243 (30.45%), Postives = 118/243 (48.56%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEV-HEKI---DFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPN-EVEVTQLDGTKLSY---------------SAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMR-AVVARNLEGRGINLHPRT-TIKELIKSEESIKVIT-DHGEEIVADVVLFATGR 667
            PKK++ Y      +    +SYG     +K+   DFDW     K+   + RLNGIY+R L N GV    G       N +VEVT     +LS+               +    LIATG  A   P + G EL  TSD    L++ PK   V+G GYI VE + I++ +GS   L+ R +  LR FD+ ++ ++     +  G+N+  ++ ++ ++ K +   K IT  +G+ +  D +++  GR
Sbjct:   56 PKKVMWYAGDLAEKRHHLKSYGLSTTDDKVKYGDFDWSTFKDKRDAYVKRLNGIYERNLKNEGVDYIYGFAHFANSNGDVEVTLTGDQELSFLEEGKEFKKDEKLVFAGSKTLIATGGYAINPPNVEGHELGTTSDGFFELQKQPKSVAVVGAGYIGVELSGIFKALGSETHLVIRGDTVLRSFDESIQNSITDYYTDKLGVNIIKQSGSVSKVEKIDGDRKKITLGNGQVLEVDELIWTMGR 298          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: TRXR2_BOVIN (Thioredoxin reductase 2, mitochondrial OS=Bos taurus GN=TXNRD2 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 69/231 (29.87%), Postives = 111/231 (48.05%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQ-ELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEES------IKVITDHGEEIVADVVLFATGRAPNT 679
            PKK++   A  GG + DA  YGW V +     W  L     + +  LN  ++  L +  VK +  +   V  + V      G +   SA+HI+IATG R +    I G  E  ITSD+   L+E P + +V+G  Y+A+E A +  G+G    ++ R  +PLR FD +M ++V  ++ G G  +      +++ K          + + +D  +    D VL+A GR P T
Sbjct:   81 PKKLMHQAALLGGMIRDAPHYGWGVAQA-PHSWATLADAVQNHVKSLNWGHRIQLQDRKVKYFNVKASFVDTHTVCGVSKGGEETLLSAEHIVIATGGRPRYPTHIEGALEYGITSDDLFWLKESPGKTLVVGASYVALECAGLLTGLGLDTTVMIR-SVPLRAFDQQMASLVTEHMAGHGTRILRGCAPEKVEKLPGQQLRVTWVDLTSDRKDAGTFDTVLWAIGRVPET 309          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: DLDH1_BACST (Dihydrolipoyl dehydrogenase OS=Bacillus stearothermophilus GN=pdhD PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 68/227 (29.96%), Postives = 111/227 (48.90%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEE---IVADVVLFATGRAPNT 679
            P K L+  +    + + +   G +  E +  D+ K+ + K   + +L G  + LL    V++ +GE   V  N V V   D  + +Y+ K+ +IATGSR    P        + S  AL+L E+PK  VV+GGGYI +E  + +   G+ V +L      L GF+ +M A++ + L+ +G+ +      K   + E+ + V  +   E   I AD VL   GR PNT
Sbjct:   54 PSKALISASHRYEQAKHSEEMGIKA-ENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQ-TYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 278          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: TRXR_PLAF5 (Thioredoxin reductase OS=Plasmodium falciparum (isolate FCH-5) GN=TR PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 74/234 (31.62%), Postives = 115/234 (49.15%), Query Frame = 2
Query:   11 PKKILVYGASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGT---KLSYSAKHILIATGSRAQRAPIP-----GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKG 685
            PKK++ Y    G   + D+++YGW+  + +  DWKKL+      I  LN  Y   L ++ VK   G  K+   N V    L G    + + + K+ILIATG R     IP      +EL+ITSD+  SL++ P + +V+G  Y+A+E +     +G  V +  R  + LRGFD +    V   +E +G+        K+L K ++ I V        + D VL+A GR  +  G
Sbjct:   95 PKKLMHYAGHMGSIFKLDSKAYGWKF-DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSY-YLKGDLSKEETVTGKYILIATGCRPH---IPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDG 322          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: TRXR2_PLAF7 (Thioredoxin reductase 2 OS=Plasmodium falciparum (isolate 3D7) GN=trxr2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 74/234 (31.62%), Postives = 115/234 (49.15%), Query Frame = 2
Query:   11 PKKILVYGASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGT---KLSYSAKHILIATGSRAQRAPIP-----GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKG 685
            PKK++ Y    G   + D+++YGW+  + +  DWKKL+      I  LN  Y   L ++ VK   G  K+   N V    L G    + + + K+ILIATG R     IP      +EL+ITSD+  SL++ P + +V+G  Y+A+E +     +G  V +  R  + LRGFD +    V   +E +G+        K+L K ++ I V        + D VL+A GR  +  G
Sbjct:  171 PKKLMHYAGHMGSIFKLDSKAYGWKF-DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSY-YLKGDLSKEETVTGKYILIATGCRPH---IPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDG 398          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHR_PLAFK (Glutathione reductase OS=Plasmodium falciparum (isolate K1 / Thailand) GN=GR2 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 71/238 (29.83%), Postives = 123/238 (51.68%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLS------------YSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIK-SEESIKVITDHGEEIV-ADVVLFATGRAPNTK 682
            PKKI+   AS    LE++R YG++   K  F+   L++++   I RLN IY++ LS   V LYEG    +  N +    + GTK +               ++ILIA G++    P+ G E  I+SDE  +++E  K+  ++G GYIAVE  ++ + +G    +  R    LR FD+ +  V+  +++   IN+     + E+ K S++++ +    G      D V++  GR+P+T+
Sbjct:   47 PKKIMFNAASVHDILENSRHYGFDT--KFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRI---LIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: GSHR_PLAF7 (Glutathione reductase OS=Plasmodium falciparum (isolate 3D7) GN=GR3 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 71/238 (29.83%), Postives = 123/238 (51.68%), Query Frame = 2
Query:   11 PKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLS------------YSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIK-SEESIKVITDHGEEIV-ADVVLFATGRAPNTK 682
            PKKI+   AS    LE++R YG++   K  F+   L++++   I RLN IY++ LS   V LYEG    +  N +    + GTK +               ++ILIA G++    P+ G E  I+SDE  +++E  K+  ++G GYIAVE  ++ + +G    +  R    LR FD+ +  V+  +++   IN+     + E+ K S++++ +    G      D V++  GR+P+T+
Sbjct:   47 PKKIMFNAASVHDILENSRHYGFDT--KFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRI---LIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278          
BLAST of FC931951 vs. ExPASy Swiss-Prot
Match: DLDH1_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=pdhD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 65/202 (32.18%), Postives = 105/202 (51.98%), Query Frame = 2
Query:   89 EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRG-INLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNT 679
            E +  D+ K+ + K   + +L G    LL    V + +GE   V  N V V   + +  +Y+ K+ +IATGSR    P     E  + S  AL+L+E+PK+ VV+GGGYI  E  + +   G+ + +L   +  L GF+ +M ++V R L+ +G + +H     K + +  + + V  +  GEE  + AD VL   GR PNT
Sbjct:   79 ENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRVMD-ENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLVVIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTNAMAKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNT 279          
The following BLAST results are available for this feature:
BLAST of FC931951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
DLDH_DICDI1.814e-2131.55Dihydrolipoyl dehydrogenase, mitochondrial OS=Dict... [more]
DLDH_PEA3.094e-2130.77Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisu... [more]
GSHR_DEBHA4.041e-2130.45Glutathione reductase OS=Debaryomyces hansenii GN=... [more]
TRXR2_BOVIN5.836e-2029.87Thioredoxin reductase 2, mitochondrial OS=Bos taur... [more]
DLDH1_BACST7.622e-2029.96Dihydrolipoyl dehydrogenase OS=Bacillus stearother... [more]
TRXR_PLAF51.300e-1931.62Thioredoxin reductase OS=Plasmodium falciparum (is... [more]
TRXR2_PLAF71.300e-1931.62Thioredoxin reductase 2 OS=Plasmodium falciparum (... [more]
GSHR_PLAFK1.300e-1929.83Glutathione reductase OS=Plasmodium falciparum (is... [more]
GSHR_PLAF71.300e-1929.83Glutathione reductase OS=Plasmodium falciparum (is... [more]
DLDH1_BACSU2.218e-1932.18Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]

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Properties
Property NameValue
Genbank descriptionC34202H10EF PostHarveN Citrus clementina cDNA clone C34202H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931951 ID=FC931951; Name=FC931951; organism=Citrus clementina; type=EST; length=701bp
GTGGTTGTGTCCCAAAAAGATATTGGTCTATGGAGCATCATTTGGAGGTG
AACTTGAGGATGCAAGGAGTTATGGATGGGAGGTACATGAGAAAATTGAC
TTCGACTGGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACT
AAATGGAATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATG
AAGGGGAGGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTA
GATGGCACTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGG
AAGTAGGGCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCT
CTGACGAGGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTT
GGTGGAGGGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGG
TTCTACTGTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTG
ATGATGAAATGCGGGCAGTAGTTGCCAGAAATCTGGAAGGGAGGGGAATT
AATTTGCACCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAG
TATAAAAGTTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTAC
TCTTTGCCACTGGCAGGGCACCTAATACAAAAGGTTGAATTTGAAGCTGT
T
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