FC931954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.603e-61 Identity = 109/189 (57.67%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 122 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 V + R+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+GVL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+F DEVDAI ARFD G D EVQR ++E++NQ+DGFD N+KV+MA NR DTLD Sbjct: 132 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLD 320
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.603e-61 Identity = 109/189 (57.67%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 122 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 V + R+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+GVL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+F DEVDAI ARFD G D EVQR ++E++NQ+DGFD N+KV+MA NR DTLD Sbjct: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLD 321
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.603e-61 Identity = 109/189 (57.67%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 122 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 V + R+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+GVL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+F DEVDAI ARFD G D EVQR ++E++NQ+DGFD N+KV+MA NR DTLD Sbjct: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLD 321
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.503e-60 Identity = 115/230 (50.00%), Postives = 165/230 (71.74%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA-DREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 G+ ++ + +N +V Y V I I+ + +KP+ VAL S L+ +LP + D +SL+ + PD TY +GG + Q +EI+E +ELP+ H EL++ +GI P+G+LLYGPPGTGKT+LA+AVA+HT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R D+ G+ D EVQR ++ELLNQ+DGF+ T N+KVIMA NR+D LD Sbjct: 70 GEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 299
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.269e-60 Identity = 115/229 (50.22%), Postives = 160/229 (69.87%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 G +E + + +V + Y V++ +N + LK VAL S + +LP + D +SL+ + PD TY IGG D Q +EIRE +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQKY+GEG R+VR++F +A+E+AP+IIF+DE+D+I + R D+ G+D EVQR ++ELLNQ+DGF+ N+KVIMA NR+D LD Sbjct: 121 GVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILD 349
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.576e-60 Identity = 111/231 (48.05%), Postives = 158/231 (68.40%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSIS--LLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 G +E++D+++G+V ++T + Y+ I I L+P VALH+ +N + + LPP+ D + +L KPD TY DIGG + Q +E+ EA+ L LTH E ++++ I PP+GVL+YGPPGTGKT++A+A A+ T A F+++ G + VQ Y+G+G R+VRD F LAKE P IIFIDE+DAI R D+ DREVQR ++ELLNQ+DGF + VK+I A NRVD LD Sbjct: 71 GNVVEVLDEHSGVVNASTRMSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKTLMARACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILD 301
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.622e-59 Identity = 113/229 (49.34%), Postives = 160/229 (69.87%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+KVIMA NR+D LD Sbjct: 74 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.622e-59 Identity = 113/229 (49.34%), Postives = 160/229 (69.87%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+KVIMA NR+D LD Sbjct: 74 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.622e-59 Identity = 113/229 (49.34%), Postives = 160/229 (69.87%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+KVIMA NR+D LD Sbjct: 74 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
BLAST of FC931954 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.622e-59 Identity = 113/229 (49.34%), Postives = 160/229 (69.87%), Query Frame = 2 Query: 2 GQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTILAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMANNRVDTLD 688 G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+KVIMA NR+D LD Sbjct: 74 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302 The following BLAST results are available for this feature:
BLAST of FC931954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931954 ID=FC931954; Name=FC931954; organism=Citrus clementina; type=EST; length=689bpback to top |