FC931955

Overview
NameFC931955
Unique NameFC931955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 66/251 (26.29%), Postives = 107/251 (42.63%), Query Frame = 1
Query:    4 RTSQSHCPSIMNQFIPIRN-MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAP--KPEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            +T+ ++  S+   F+ + +  +IP T K V+  + GG   L+YK   PVP P+A ++L+    SGV + D +   G +P P   P + G E              F++GD   + WL+                            G + +Y        A+IP+G    +I     +G+TV   +K T  ++ G WV +         L  Q  K +G +V+G  GG  K  L K  G +V ID+R  +D
Sbjct:    8 QTALANKASVSRSFLRLNSSFAIPETQKGVIFYENGGK--LEYK-DLPVPKPKANEILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADLSGYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALK-TADLKPGQWVAISGAAGGLGSLAVQYAKAMGLRVLGIDGGDGKEELFKQCGGEVFIDFRKSKD 254          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 64/225 (28.44%), Postives = 93/225 (41.33%), Query Frame = 1
Query:   64 SIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK--PEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDY 645
            SIP T K V+  + GG   LQYK   PVP P+A +LL+    SGV + D +   G +P P   P + G E             G+++GD   + WL+                            G + +Y        AKIP G    ++     +G+TV   +K    ++ GDWV +         L  Q  K +G +V+G   G EK  L K LG +  ID+
Sbjct:    4 SIPETQKGVIFYENGGE--LQYK-DIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLSGYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALKSA-NLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVLGIDAGEEKAKLFKDLGGEYFIDF 224          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_LAMGU (Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 64/200 (32.00%), Postives = 92/200 (46.00%), Query Frame = 1
Query:   79 MKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK--PEILGREXXXXXXXXXPGTSGFQVGDRVAWLST--GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVEDKN 666
            M+A+ V + GGPEVL+ ++   VP P+  Q+L++    GVN +DTY R+G Y      P   G +            S F+ GDRV   ST  GGYAEY         K+P  +  +   A  +   T    +  +   + G+ VL+H           QI +    KV+GTAG  E   +V   GA  V ++R  ED N
Sbjct:    8 MRAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSGTYSRKPRLPYTPGLDVAGLIEAVGERVSAFKKGDRVFTTSTVSGGYAEYALAADHTVYKLPGELDFQKGAAIGVPYFTAYRALLHSACAKAGESVLVHGASGGVGLAACQIARACCFKVLGTAGTEEGQRVVLQNGAHEVFNHR--EDIN 205          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 66/231 (28.57%), Postives = 96/231 (41.56%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYP--APKPEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MSIPTT K V+  + GG   L YK   PVP P++ +LL+    SGV + D +   G +P     P + G E             G+++GD   + WL+                            G + +Y        A IP G     +     +G+TV   +K T  ++ GDWV +         L  Q  K +G +V+G  GG  K  L KSLG +V ID+   +D
Sbjct:    1 MSIPTTQKGVIFYENGGQ--LYYK-DIPVPKPKSNELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADLSGYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALK-TAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRVLGIDGGEGKEELFKSLGGEVFIDFTKSKD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 61/231 (26.41%), Postives = 97/231 (41.99%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYP--APKPEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            M+IP T K V+  + GG   LQYK   PVP P+  +LL+    SGV + D +   G +P     P + G E            +G+++GD   + WL+                            G + +Y        A+IP+ +   ++     +G+TV   +K  + ++ GDWV +         L  Q  K +G +V+G   G EK  L K LG +  ID+   +D
Sbjct:    1 MAIPETQKGVIFYEHGGE--LQYK-DIPVPKPKPNELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADLSGYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALKSAH-IKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDAGDEKAKLFKELGGEYFIDFTKTKD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 63/194 (32.47%), Postives = 91/194 (46.91%), Query Frame = 1
Query:   79 MKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK--PEILGREXXXXXXXXXPGTSG-FQVGDR-VAWLSTGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYR 648
            M AV  ++ GGPE L Y      P+P  G++L++   S +N  D   R G Y  P     ILG E         PG  G +++GD  +A L  GG A+Y  VP  L   IPEG++     A   + LT    +     VQ GD+VL+H           Q+ ++ GA  + TAG  +K  + + LGA    +Y+
Sbjct:    1 MLAVHFDKPGGPENL-YVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYK 193          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: MCAS_MYCBO (Mycocerosic acid synthase OS=Mycobacterium bovis GN=mas PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 56/193 (29.02%), Postives = 90/193 (46.63%), Query Frame = 1
Query:   88 VVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPA--PKPEILGREXXXXXXXXXPGTSGFQVGDRVAWLSTGG-YAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVE 657
            V V + G  + L++  S  VP P  GQ+ V  ++S +N+ D     G +P    +   LG +          G +G QVGDRV   S GG +  +      L   +P G++DE  + +  +  T    + +   ++ GD VL+H            I +  GA++  TAG P K A+++ +G + V D RSVE
Sbjct: 1423 VQVRRPGDLQTLEFVASDRVP-PGPGQIEVAVSMSSINFADVLIAFGRFPIIDDREPQLGMDFVGVVTAVGEGVTGHQVGDRVGGFSEGGCWRTFLTCDANLAVTLPPGLTDEQAITAATAHATAWYGLNDLAQIKAGDKVLIHSATGGVGQAAISIARAKGAEIFATAGNPAKRAMLRDMGVEHVYDSRSVE 1614          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15
Identity = 59/197 (29.95%), Postives = 90/197 (45.69%), Query Frame = 1
Query:   79 MKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK--PEILGREXXXXXXXXXPGTSGFQVGDRVAWLST--GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVE 657
            M+A+ V + GGPEVL+ ++   VP P+  Q+L++    GVN +DTY R+G +      P   G +            S F+ GDRV    T  GGYAEY          +PE +  +   A  +   T    +  +  V+ G+ VL+H           QI +  G KV+GTA   E   +V   GA  V +++  +
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNIKPLLPYTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEAD 204          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 62/231 (26.84%), Postives = 96/231 (41.56%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK--PEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MSIP T KA++  ++ G   L++K   PVP P+  +LL+    SGV + D +   G +P P   P + G E             G+++GD   + WL+                            G + EY        A IP+G    ++     +G+TV   +K    ++ G W  +         L  Q  K +G +V+G  GGP K  L  SLG +V ID+   +D
Sbjct:    1 MSIPETQKAIIFYESNGK--LEHK-DIPVPKPKPNELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALKSA-NLRAGHWAAISGAAGGLGSLAVQYAKAMGYRVLGIDGGPGKEELFTSLGGEVFIDFTKEKD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.571e-14
Identity = 71/232 (30.60%), Postives = 98/232 (42.24%), Query Frame = 1
Query:   79 MKAVVVEQTGGP----EVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPA-PK-PEILGREXXXXXXXXXPGTSGFQVGDRVA--WLST---------------------------GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVEDKNW 669
            MKA VVEQ   P    EV + K SY       G++LVR    GV + D +   G +P  PK P I G E         PG +  +VGDRV   WL +                           GGYAEY         KIP+ +S E+    F +G+T    +K T   + G+WV ++        +  Q  K +G  V+    G EK  L K LGAD+V++ +  +   W
Sbjct:    1 MKAAVVEQFKKPLQVKEVEKPKISY-------GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIY-GIGGLGHVAVQYAKAMGLNVVAVDLGDEKLELAKQLGADLVVNPKHDDAAQW 223          
The following BLAST results are available for this feature:
BLAST of FC931955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ADH4_KLULA2.104e-1626.29Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH1_KLULA2.747e-1628.44Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
QOR_LAMGU3.588e-1632.00Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE... [more]
ADH2_KLUMA3.588e-1628.57Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH1_KLUMA4.686e-1626.41Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
QORX_HUMAN6.121e-1632.47Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
MCAS_MYCBO6.121e-1629.02Mycocerosic acid synthase OS=Mycobacterium bovis G... [more]
QOR_BOVIN1.781e-1529.95Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
ADH2_YEAST3.967e-1526.84Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH1_BACST2.571e-1430.60Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]

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Properties
Property NameValue
Genbank descriptionC34203A02EF PostHarveN Citrus clementina cDNA clone C34203A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931955 ID=FC931955; Name=FC931955; organism=Citrus clementina; type=EST; length=671bp
GATAGGACTTCGCAATCACATTGTCCCTCCATCATGAACCAATTCATTCC
AATCCGCAACATGTCTATCCCAACAACCATGAAGGCTGTAGTGGTCGAGC
AGACCGGCGGTCCTGAAGTGCTGCAATACAAGACCTCATACCCAGTTCCT
ACACCACAAGCAGGACAGCTGCTAGTGCGCAACAACATTTCCGGCGTTAA
CTATATCGACACCTACTTCCGGACGGGCCTATACCCCGCGCCCAAGCCCG
AGATCTTAGGCCGCGAGGGCGCTGGTGTTGTCGCTGCTGTCGGTCCCGGG
ACTTCTGGATTTCAGGTCGGTGATCGGGTTGCATGGTTGTCTACTGGTGG
GTATGCCGAGTACACTGCAGTACCAGTGGCCCTGACTGCTAAGATCCCCG
AGGGAATCAGTGATGAGGATATCATGGCGTCGTTCCTGAGCGGTTTGACA
GTGCTTTCTTTCGTAAAGGAGACTTACCCTGTGCAGAAGGGCGATTGGGT
TCTTCTTCATGCTGCGGCTGGTGGTGCTGGCTTCCTTATGACGCAGATTT
TGAAGATTTTGGGTGCCAAGGTCATTGGTACTGCTGGCGGCCCAGAGAAG
TGTGCGCTTGTGAAGAGCCTCGGTGCCGATGTGGTGATTGATTATCGCAG
TGTGGAAGATAAGAACTGGGT
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