FC931955

Overview
NameFC931955
Unique NameFC931955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 65/231 (28.14%), Postives = 97/231 (41.99%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAP--KPEILGREXXXXXXXXXPGTSGFQVGDR--VAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MSIPT   A V E+ GGP  L YK   PVP P   Q+LV+   SGV + D +   G +P P   P + G E              F++GD+  + WL+                            G + +Y     +  +KIP G+  +       +G+TV   +KE   V+ G  V +         L  Q  K +G +V+   GG EK A+ +SLG +  +D+   +D
Sbjct:    1 MSIPTMQWAQVAEKVGGP--LVYK-QIPVPKPGPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLSGYTVDGTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEA-GVRPGQTVAIVGAGGGLGSLAQQYAKAMGIRVVAVDGGDEKRAMCESLGTETYVDFTKSKD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14
Identity = 61/231 (26.41%), Postives = 95/231 (41.13%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAP--KPEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MSIP T K V+  ++ G   L++K   PVP P+A +LL+    SGV + D +   G +P P   P + G E             G+++GD   + WL+                            G + +Y        A IP+G     +     +G+TV   +K    +  G WV +         L  Q  K +G +V+G  GG  K  L +S+G +V ID+   +D
Sbjct:    1 MSIPETQKGVIFYESHGK--LEHK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14
Identity = 67/219 (30.59%), Postives = 93/219 (42.47%), Query Frame = 1
Query:   79 MKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPA-PK-PEILGREXXXXXXXXXPGTSGFQVGDRVA--WLST---------------------------GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVID 642
            MKA VVEQ   P  ++       PT   G++LVR    GV + D +   G +P  PK P I G E         PG +  +VGDRV   WL +                           GGYAEY         KIP+ +S E+    F +G+T    +K T   + G+WV ++        +  Q  K +G  V+    G EK  L K LGAD+V++
Sbjct:    1 MKAAVVEQFKEPLKIK---EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIY-GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVN 214          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: PHAS_MYCTU (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis GN=pks2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 51/191 (26.70%), Postives = 85/191 (44.50%), Query Frame = 1
Query:   94 VEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPKPEI--LGREXXXXXXXXXPGTSGFQVGDRVAWLSTGG-YAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVE 657
            +   G  + ++    + VP P  GQ+ V    S VN+ D     G YP+ +  +  LG +         PG +  +VGD V  +S  G +  +      L A +P G+ D    A   +  T    + E   ++ GD VL+H            I +  GA++  TAG P++  L++++G + V D RS+E
Sbjct: 1432 IRTPGDMQTIELAAFHRVP-PGPGQIEVAVRASSVNFADVLIAFGRYPSFEGHLPQLGTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYDSRSIE 1621          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: PHAS_MYCTA (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pks2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 51/191 (26.70%), Postives = 85/191 (44.50%), Query Frame = 1
Query:   94 VEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPKPEI--LGREXXXXXXXXXPGTSGFQVGDRVAWLSTGG-YAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVE 657
            +   G  + ++    + VP P  GQ+ V    S VN+ D     G YP+ +  +  LG +         PG +  +VGD V  +S  G +  +      L A +P G+ D    A   +  T    + E   ++ GD VL+H            I +  GA++  TAG P++  L++++G + V D RS+E
Sbjct: 1432 IRTPGDMQTIELAAFHRVP-PGPGQIEVAVRASSVNFADVLIAFGRYPSFEGHLPQLGTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYDSRSIE 1621          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: PHAS_MYCBP (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pks2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 51/191 (26.70%), Postives = 85/191 (44.50%), Query Frame = 1
Query:   94 VEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPKPEI--LGREXXXXXXXXXPGTSGFQVGDRVAWLSTGG-YAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVE 657
            +   G  + ++    + VP P  GQ+ V    S VN+ D     G YP+ +  +  LG +         PG +  +VGD V  +S  G +  +      L A +P G+ D    A   +  T    + E   ++ GD VL+H            I +  GA++  TAG P++  L++++G + V D RS+E
Sbjct: 1432 IRTPGDMQTIELAAFHRVP-PGPGQIEVAVRASSVNFADVLIAFGRYPSFEGHLPQLGTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYDSRSIE 1621          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: PHAS_MYCBO (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis GN=pks2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13
Identity = 51/191 (26.70%), Postives = 85/191 (44.50%), Query Frame = 1
Query:   94 VEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPKPEI--LGREXXXXXXXXXPGTSGFQVGDRVAWLSTGG-YAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVE 657
            +   G  + ++    + VP P  GQ+ V    S VN+ D     G YP+ +  +  LG +         PG +  +VGD V  +S  G +  +      L A +P G+ D    A   +  T    + E   ++ GD VL+H            I +  GA++  TAG P++  L++++G + V D RS+E
Sbjct: 1432 IRTPGDMQTIELAAFHRVP-PGPGQIEVAVRASSVNFADVLIAFGRYPSFEGHLPQLGTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYDSRSIE 1621          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 62/231 (26.84%), Postives = 97/231 (41.99%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAP--KPEILGREXXXXXXXXXPGTSGFQVGDR--VAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MSIP    A V EQ GGP  L YK   PVP P   ++LV+   SGV + D +   G +P P   P + G E            + F++GD   + WL+                            G + +Y        +K+P+ +  + +     +G+TV   +KE+  V+ G  V +         L  Q  K +G +V+   GG EK A+ + LGA+  +D+   +D
Sbjct:    1 MSIPEMQWAQVAEQKGGP--LIYK-QIPVPKPGPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASLSGYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKES-GVRPGQTVAIVGAGGGLGSLALQYAKAMGIRVVAIDGGEEKQAMCEQLGAEAYVDFTKTQD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH3_YEAST (Alcohol dehydrogenase 3, mitochondrial OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12
Identity = 59/230 (25.65%), Postives = 93/230 (40.43%), Query Frame = 1
Query:   64 SIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAP--KPEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            +IP T K V+  +  G   L YK   PVP P+  ++L+    SGV + D +   G +P P   P + G E             G++VGD   + WL+                            G + ++        AKI +G    ++     +G+TV   +KE   ++ GDWV +         L  Q    +G +V+G   G EK  L K LG +V ID+   ++
Sbjct:   29 AIPKTQKGVIFYENKGK--LHYK-DIPVPEPKPNEILINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVKLGSNVKGWKVGDLAGIKWLNGSCMTCEFCESGHESNCPDADLSGYTHDGSFQQFATADAIQAAKIQQGTDLAEVAPILCAGVTVYKALKEA-DLKAGDWVAISGAAGGLGSLAVQYATAMGYRVLGIDAGEEKEKLFKKLGGEVFIDFTKTKN 254          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12
Identity = 66/233 (28.33%), Postives = 96/233 (41.20%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK--PEILGREXXXXXXXXXP--GTSGFQVGDR--VAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MS+P    A VVE+ G P V  YK   PVP P   ++LV+   SGV + D +   G +P P   P I G E                F++GDR  + WL+                            G + +YT    AL +KIP+ +  +       +G+TV   +KE+   + G  V +         L  Q  K +G + I    G EK A+ + LGA+V ID+    D
Sbjct:    1 MSVPEVQWAQVVEKAGTPPV--YK-QVPVPKPGPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLSGYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKES-GARPGQTVAIVGAGGGLGSLAQQYAKAMGLRTIAIDSGDEKKAMCEQLGAEVFIDFSKSAD 229          
The following BLAST results are available for this feature:
BLAST of FC931955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ADH1_EMENI4.386e-1428.14Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH1_YEAST5.729e-1426.41Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
ADH3_BACST7.482e-1430.59Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
PHAS_MYCTU2.177e-1326.70Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
PHAS_MYCTA2.177e-1326.70Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
PHAS_MYCBP2.177e-1326.70Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
PHAS_MYCBO2.177e-1326.70Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
ADH1_ASPFN6.334e-1326.84Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH3_YEAST1.080e-1225.65Alcohol dehydrogenase 3, mitochondrial OS=Saccharo... [more]
ADH3_EMENI2.407e-1228.33Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34203A02EF PostHarveN Citrus clementina cDNA clone C34203A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931955 ID=FC931955; Name=FC931955; organism=Citrus clementina; type=EST; length=671bp
GATAGGACTTCGCAATCACATTGTCCCTCCATCATGAACCAATTCATTCC
AATCCGCAACATGTCTATCCCAACAACCATGAAGGCTGTAGTGGTCGAGC
AGACCGGCGGTCCTGAAGTGCTGCAATACAAGACCTCATACCCAGTTCCT
ACACCACAAGCAGGACAGCTGCTAGTGCGCAACAACATTTCCGGCGTTAA
CTATATCGACACCTACTTCCGGACGGGCCTATACCCCGCGCCCAAGCCCG
AGATCTTAGGCCGCGAGGGCGCTGGTGTTGTCGCTGCTGTCGGTCCCGGG
ACTTCTGGATTTCAGGTCGGTGATCGGGTTGCATGGTTGTCTACTGGTGG
GTATGCCGAGTACACTGCAGTACCAGTGGCCCTGACTGCTAAGATCCCCG
AGGGAATCAGTGATGAGGATATCATGGCGTCGTTCCTGAGCGGTTTGACA
GTGCTTTCTTTCGTAAAGGAGACTTACCCTGTGCAGAAGGGCGATTGGGT
TCTTCTTCATGCTGCGGCTGGTGGTGCTGGCTTCCTTATGACGCAGATTT
TGAAGATTTTGGGTGCCAAGGTCATTGGTACTGCTGGCGGCCCAGAGAAG
TGTGCGCTTGTGAAGAGCCTCGGTGCCGATGTGGTGATTGATTATCGCAG
TGTGGAAGATAAGAACTGGGT
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