FC931966

Overview
NameFC931966
Unique NameFC931966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.284e-32
Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 1
Query:    7 KNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRL-DGKFSVHSLPKTAKNEWVLCRVFQKGSGGKKTHISGLAGLG 390
            K +PW+LP  A  GEKEWYFF  RDRKYP G R NRA  SGYWKATG DK +   K  V +KK LVFY G+APKGEK++W+MHEYRL D   S         ++WVLCR++ K  G +K   + +A  G
Sbjct:   48 KFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKP-VAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAAVAAAG 175          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 1
Query:    4 NKNEPWELPWKAKMG---EKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRLDGKF------SVHS----LPKTAKNE-WVLCRVFQK 342
            NK EPW++    K+G   + +WYFF  +D+KYPTG RTNRAT +G+WKATG+DK IY     +GM+KTLVFY+GRAP G+KS W+MHEYRLD         +VH     + + +++E WV+CR+F+K
Sbjct:   54 NKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKK 180          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 67/130 (51.54%), Postives = 79/130 (60.77%), Query Frame = 1
Query:    7 KNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYR----GKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRLDGKFSVHSLPKTAK------NEWVLCRVFQKGSGGKKTH 366
            K +PWELP KA  GE+EWYFF  RDRKYP G R NRA  SGYWKATG DK +      G   VG+KK LVFY G+ PKG KS W+MHEYRL      H      K      ++WVLCR+++K +     H
Sbjct:   56 KFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASRH 185          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31
Identity = 64/129 (49.61%), Postives = 83/129 (64.34%), Query Frame = 1
Query:    4 NKNEPWELPWKAKMG---EKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRLDGKFSVHSLPKTAKN-----------EWVLCRVFQKGS 348
            NK EPW++    K+G   + +WYF+  +D+KYPTG RTNRAT  G+WKATG+DK IY     +GM+KTLVFY+GRAP G+KS W+MHEYRLD    + S      N            WV+CRVF+K +
Sbjct:   49 NKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNN 177          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 1
Query:    7 KNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRL-DGKFSVHSLPKTAK-NEWVLCRVFQK 342
            K +PWELP  A  GEKEWYFF  RDRKYP G R NR+  SGYWKATG DK I   K  VG+KK LVFY G+APKGEK++W+MHEYRL D   SV     + + ++WVLCR++ K
Sbjct:   46 KYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKP-VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNK 158          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.526e-31
Identity = 67/128 (52.34%), Postives = 82/128 (64.06%), Query Frame = 1
Query:    7 KNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRLDGKFSVHSLPKTAKNEWVLCRVFQKGSGGKKTHISGLAGLG 390
            K +PW LP KA  GEKEWYFF  RDRKYP G R NR   SGYWKATG DK I      VG+KK LVFY G+APKG K++W+MHEYRL      +    T  ++WVLCR+++K +  +K   + L   G
Sbjct:   53 KFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNG--STKLDDWVLCRIYKKQTSAQKQAYNNLMTSG 178          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.526e-31
Identity = 66/115 (57.39%), Postives = 79/115 (68.70%), Query Frame = 1
Query:    7 KNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRL---DGKFSVHSLPKTAKNEWVLCRVFQK 342
            K  PWELP  A  GEKEWYFF  RDRKYP G R NRA  +GYWKATG DK I + K+L G+KK LVFY G+APKG K++W+MHEYRL   D   S +       ++WVLCR++ K
Sbjct:   89 KFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTL-GIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNK 202          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.626e-31
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 1
Query:    4 NKNEPWELPWKAKMG---EKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRLD------GKFSVHSLPKTAKNE--WVLCRVFQK 342
            NK EPW++  + ++G   + +WYFF  +D+KYPTG RTNRATV+G+WKATG+DK I      +G++KTLVFY+GRAP G+KS W+MHEYRLD      G   V +    + NE  WV+CRVF+K
Sbjct:   54 NKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRK 177          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.253e-30
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 1
Query:    4 NKNEPWELPWKAKMG---EKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSL-VGMKKTLVFYRGRAPKGEKSSWVMHEYRLDGKFSVHSLPKTAKNEWVLCRVFQKGS 348
            NK EPW+L  + ++G   + EWYFF  +D+KYPTG RTNRAT +G+WKATG+DK I+   +  +GM+KTLVFY GRAP G+K+ W+MHEYRLD            ++ WV+CRVF K S
Sbjct:   48 NKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLD-----QDNVDVQEDGWVVCRVFMKKS 161          
BLAST of FC931966 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 58/121 (47.93%), Postives = 77/121 (63.64%), Query Frame = 1
Query:    7 KNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRL---DGKFSVHSLPKTAKNEWVLCRVFQKGSGGKK 360
            +++PW+LP +A  G +EWYFF  RDRKYP G R NRA  SGYWKATG DK +       G+KK LVFY G+ P+G K+ W+MHEYRL    G  +         ++WVLCR++ K +  +K
Sbjct:   56 RHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEK 176          
The following BLAST results are available for this feature:
BLAST of FC931966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC48_ORYSJ2.284e-3253.49NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC43_ARATH3.896e-3251.18NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC18_ARATH3.896e-3251.54NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC66_ARATH1.481e-3149.61NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC2_ARATH1.481e-3159.65NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC55_ARATH2.526e-3152.34NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NA102_ARATH2.526e-3157.39NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC12_ARATH5.626e-3152.42NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC76_ORYSJ1.253e-3052.94NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC67_ORYSJ6.221e-3047.93NAC domain-containing protein 67 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC34203B01EF PostHarveN Citrus clementina cDNA clone C34203B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931966 ID=FC931966; Name=FC931966; organism=Citrus clementina; type=EST; length=699bp
CCGAACAAAAATGAACCTTGGGAATTGCCTTGGAAAGCAAAGATGGGAGA
GAAAGAATGGTACTTTTTCTGCATGAGGGATAGGAAATATCCAACTGGTT
TGAGGACTAACAGGGCGACTGTATCTGGTTATTGGAAAGCCACGGGGAAA
GACAAGGAGATTTACAGAGGAAAATCTCTAGTTGGAATGAAAAAGACTCT
TGTTTTTTACAGGGGAAGAGCCCCAAAAGGGGAGAAATCAAGCTGGGTCA
TGCACGAATACAGATTGGACGGCAAATTCTCTGTTCATAGTCTCCCCAAA
ACTGCCAAAAATGAGTGGGTGCTTTGCCGGGTGTTTCAGAAGGGTTCTGG
TGGGAAAAAGACTCATATTTCAGGGCTAGCGGGATTAGGGTCTTTTGGAA
ATGAATTGGGTCCTCCTGGCTTGCCACCATTAATGGATTCATCTCCTGAT
AATGGCAGCAAGACCATCAAATCTGTTGCCGATTCGGCTTACGTGTCCTG
CTTCTCCAATTCTATTGATCTTCAAAGAAATCAAAAAACCACCACCACCA
TTGAAAATTTTTTCAACAATCCTCCTCCCATCTCTGTGTCTTCAAACTGT
CCTGATGTTTTTCCAAGAATCCCACTCTCTTCAAACTCATTCTATTCTCC
TTTATCGGTCCCGGTTCCATCACACGCGCAATTCCCAGGCTCTGTTTTC
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