FC931971

Overview
NameFC931971
Unique NameFC931971
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 2
Query:  329 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQT--SGDLNLXGQ 697
            +  N E   FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++   L EGD  +L +++  D+    L+I D GIGM +E +I +LGTIAKSGT  F+  + T  + D  L GQ
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN-PALYEGDG-ELRVRVSFDETLGTLTISDNGIGMNREQVIDHLGTIAKSGTKEFLNSLGTDQAKDSQLIGQ 123          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFT (Chaperone protein htpG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 59/126 (46.83%), Postives = 88/126 (69.84%), Query Frame = 2
Query:  326 SLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            +L  + +   FQ EV +L+ ++I+SLYSNK+IFLRELISNA+DA DK+RF +L+   +L E  N  L I+++ DK+   ++I D GIGM++++ I +LGTIAKSGT+ F++ +      D NL GQ
Sbjct:    2 TLEADKQTHGFQTEVKQLLQLMIHSLYSNKEIFLRELISNAADAADKLRFEALSAPSLLEEDPN--LRIRVEFDKQAHTITIDDNGIGMSRDEAIAHLGTIAKSGTADFLKALSGDQRKDANLIGQ 125          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_VESOH (Chaperone protein htpG OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 60/116 (51.72%), Postives = 86/116 (74.14%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ--TSGDLNLXGQ 697
            FQ EVS+L+ ++I+SLYSNK+IFLRELISNASDA+DK++F SL+D + L EG    L+I I ++K+   ++I D GIGM++ ++ KN+GTIA SGT  F++ +    + D NL GQ
Sbjct:    9 FQTEVSQLLHLMIHSLYSNKEIFLRELISNASDAVDKLKFKSLSD-DTLIEGKEA-LQIHIDVNKDANTITITDNGIGMSEVEVNKNIGTIANSGTKKFLKSLNETQAQDSNLIGQ 122          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ EV +++ ++++SLYSNK+IFLRELISNASDALDK+RFL+L++  +     + K+ IQI  +++ + ++I D GIG++ E+ ++NLGTIAKSGT  F+ ++  + + D  L GQ
Sbjct:   10 FQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQI--NEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQ 123          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ EV +++ ++++SLYSNK+IFLRELISNASDALDK+RFL+L++  +     + K+ IQI  +++ + ++I D GIG++ E+ ++NLGTIAKSGT  F+ ++  + + D  L GQ
Sbjct:   10 FQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQI--NEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQ 123          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ EV +++ ++++SLYSNK+IFLRELISNASDALDK+RFL+L++  +     + K+ IQI  +++ + ++I D GIG++ E+ ++NLGTIAKSGT  F+ ++  + + D  L GQ
Sbjct:   10 FQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQI--NEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQ 123          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPA (Chaperone protein htpG OS=Legionella pneumophila (strain Paris) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ EV +++ ++++SLYSNK+IFLRELISNASDALDK+RFL+L++  +     + K+ IQI  +++ + ++I D GIG++ E+ ++NLGTIAKSGT  F+ ++  + + D  L GQ
Sbjct:   10 FQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQI--NEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQ 123          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 56/105 (53.33%), Postives = 83/105 (79.05%), Query Frame = 2
Query:  353 EFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ 667
            +F+ EV +L+D++I+SLYSNKDIFLREL+SNASDA+DK++F S ++ ++L EG NT  +I++  DK    L+IRD GIGM   ++ +N+GTIA+SGT AF+E ++
Sbjct:    7 KFETEVQQLLDLVIHSLYSNKDIFLRELVSNASDAIDKVKFESHSNMDIL-EG-NTDWKIKLIPDKTAGTLTIRDNGIGMNVVEVEENIGTIARSGTRAFMENLK 109          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_FRASC (Chaperone protein htpG OS=Frankia sp. (strain CcI3) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 55/117 (47.01%), Postives = 81/117 (69.23%), Query Frame = 2
Query:  329 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD 679
            +    E  EFQAE  +L+ ++++S+YSNKDIFLRELISNASDALDK+R  SL         D+  L I+I+ D   + L++RD GIGM++++++  +GTIAKSGT+  + K++ S D
Sbjct:    1 MSTRVETLEFQAEARQLLQLMVHSIYSNKDIFLRELISNASDALDKLRIASLVKDG--PRVDSADLRIEIEADVNARTLTVRDNGIGMSRDEVVGLIGTIAKSGTAELLRKLRESED 115          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_BURS3 (Chaperone protein htpG OS=Burkholderia sp. (strain 383) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23
Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 2
Query:  344 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD 679
            E   FQAEV +L+ ++I+SLYSNK+IFLREL+SNASDA DK+RF  L D  +  +  N +  I+I  DK  + ++I D GIGM++++ I NLGTIA+SGT  F  K+  SGD
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEGLADNALYEDDPNVR--IRIGYDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFTKL--SGD 111          
The following BLAST results are available for this feature:
BLAST of FC931971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_ACTP21.922e-2349.60Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_XYLFT2.510e-2346.83Chaperone protein htpG OS=Xylella fastidiosa (stra... [more]
HTPG_VESOH2.510e-2351.72Chaperone protein htpG OS=Vesicomyosocius okutanii... [more]
HTPG_LEGPL2.510e-2347.41Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPH2.510e-2347.41Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_LEGPC2.510e-2347.41Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPA2.510e-2347.41Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_GEOUR2.510e-2353.33Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_FRASC2.510e-2347.01Chaperone protein htpG OS=Frankia sp. (strain CcI3... [more]
HTPG_BURS32.510e-2351.79Chaperone protein htpG OS=Burkholderia sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34203B10EF PostHarveN Citrus clementina cDNA clone C34203B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931971 ID=FC931971; Name=FC931971; organism=Citrus clementina; type=EST; length=699bp
GACCTGCGCTATATAATCATCCAACGGCGAAGTGAGCAAAAACAATAGGC
AATAATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTATACTAATT
TCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTGCTTCTCCT
TTTCCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACAGGCAAAAG
CAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCGAGGAGAAA
CTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAG
GGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAAT
TTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCT
CTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTC
TGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCT
TGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAA
GAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGA
GGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCAT
TTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTNATGGGCAATT
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