FC931971

Overview
NameFC931971
Unique NameFC931971
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.286e-27
Identity = 62/118 (52.54%), Postives = 85/118 (72.03%), Query Frame = 2
Query:  344 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLXGQ 697
            E + F A++S+L+ +IIN+ YSNK+IFLRELISNASDAL+KIR+ ++ D + +   D     I++  DK    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++ GQ
Sbjct:   11 EVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIE--DQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQ 126          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.286e-27
Identity = 62/118 (52.54%), Postives = 85/118 (72.03%), Query Frame = 2
Query:  344 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLXGQ 697
            E + F A++S+L+ +IIN+ YSNK+IFLRELISNASDAL+KIR+ ++ D + +   D     I++  DK    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++ GQ
Sbjct:   11 EVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIE--DQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQ 126          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.680e-27
Identity = 64/121 (52.89%), Postives = 91/121 (75.21%), Query Frame = 2
Query:  344 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSG---DLNLXGQ 697
            E  EFQ E+ +L+DI+INSLY++++IFLRELISNA+DA +K+R++ L+ + V  +     LEI+I  D+  K L+I D GIGMTKEDLI+N+GTIA SG+ AFV+++  +G   D+NL GQ
Sbjct:    5 ETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNV--KDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGDKKDVNLIGQ 123          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_HELPH (Chaperone protein htpG OS=Helicobacter pylori (strain HPAG1) GN=htpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.194e-27
Identity = 62/112 (55.36%), Postives = 88/112 (78.57%), Query Frame = 2
Query:  344 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD 679
            +++ FQ E+++L+D++I+SLYSNK+IFLRELISNASDALDK+ +L LTD+++  +G N    I +  D +KK L+I+D GIGM K DLI++LGTIAKSGT +F+  +  SGD
Sbjct:    4 QEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKL--KGLNITPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSGTKSFLSAL--SGD 111          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 65/116 (56.03%), Postives = 90/116 (77.59%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  L GQ
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQ 124          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 65/116 (56.03%), Postives = 90/116 (77.59%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  L GQ
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQ 124          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 65/116 (56.03%), Postives = 90/116 (77.59%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  L GQ
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQ 124          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_YERPE (Chaperone protein htpG OS=Yersinia pestis GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 65/116 (56.03%), Postives = 90/116 (77.59%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  L GQ
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQ 122          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_YERPA (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 65/116 (56.03%), Postives = 90/116 (77.59%), Query Frame = 2
Query:  356 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLXGQ 697
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  L GQ
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQ 124          
BLAST of FC931971 vs. ExPASy Swiss-Prot
Match: HTPG_WOLSU (Chaperone protein htpG OS=Wolinella succinogenes GN=htpG PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27
Identity = 62/111 (55.86%), Postives = 88/111 (79.28%), Query Frame = 2
Query:  347 KFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD 679
            K  FQ EV++L+D++I+SLYSNK+IFLRELISNASDAL+K+++L+LTD+ +       +++I    D+EKKIL++ D GIGM + DL++NLGTIAKSGT +FV ++  SGD
Sbjct:    3 KHTFQTEVNQLLDLMIHSLYSNKEIFLRELISNASDALEKLQYLTLTDENLKNLQYTPRIDIH--FDEEKKILTLSDTGIGMNESDLVENLGTIAKSGTKSFVSRL--SGD 109          
The following BLAST results are available for this feature:
BLAST of FC931971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HSP90_THEPA1.286e-2752.54Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN1.286e-2752.54Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HTPG_DESHY1.680e-2752.89Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HTPG_HELPH2.194e-2755.36Chaperone protein htpG OS=Helicobacter pylori (str... [more]
HTPG_YERPS4.888e-2756.03Chaperone protein htpG OS=Yersinia pseudotuberculo... [more]
HTPG_YERPP4.888e-2756.03Chaperone protein htpG OS=Yersinia pestis (strain ... [more]
HTPG_YERPN4.888e-2756.03Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_YERPE4.888e-2756.03Chaperone protein htpG OS=Yersinia pestis GN=htpG ... [more]
HTPG_YERPA4.888e-2756.03Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_WOLSU6.384e-2755.86Chaperone protein htpG OS=Wolinella succinogenes G... [more]

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Properties
Property NameValue
Genbank descriptionC34203B10EF PostHarveN Citrus clementina cDNA clone C34203B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931971 ID=FC931971; Name=FC931971; organism=Citrus clementina; type=EST; length=699bp
GACCTGCGCTATATAATCATCCAACGGCGAAGTGAGCAAAAACAATAGGC
AATAATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTATACTAATT
TCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTGCTTCTCCT
TTTCCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACAGGCAAAAG
CAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCGAGGAGAAA
CTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAG
GGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAAT
TTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCT
CTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCCAATGCTTC
TGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAAAGAGGTCT
TGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGCTAGACAAA
GAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATGACGAAGGA
GGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAACATCAGCAT
TTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTNATGGGCAATT
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