FC931975

Overview
NameFC931975
Unique NameFC931975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20
Identity = 69/206 (33.50%), Postives = 102/206 (49.51%), Query Frame = 2
Query:   98 SAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALFKPNAA 700
            +  + IGVNYG + ++LP P +V    K     D V++F  +   L A  ++ + V +   N D+  LA     A SWV + + P      FRYI  GNE++      L+   LPAM+ L++AL AA L SV V+T  +  +L TS PPS G F +     +   I+     + +P + N YPYF          L+YAL   +AA
Sbjct:    2 AGVEGIGVNYGMMGSDLPSPDKVVALYKANNITD-VRIFHPDTNVLEALRNSGLGVVLGTLNSDLAPLASDASYAASWVHSYVQPFAGAVSFRYINAGNEVIPGESAALV---LPAMKNLEAALQAAGL-SVPVTTAMATSVLGTSYPPSQGTFSEAALPTV-GPIVSHLASSGTPLLVNVYPYFAYSADPSSVRLDYALLSSSAA 201          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20
Identity = 68/200 (34.00%), Postives = 108/200 (54.00%), Query Frame = 2
Query:  116 GVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGD-IPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGV-----QPQTLNYALFKP 691
            GV YG + +NLP    V    K++  I  +++++ + E L A   + I + + VG  D +  L + P+ A  WV +N+  ++P  + RYI +GNE+ A    +    +L AM+ + +AL +ANL SS++VST     +++ S PPS+G FR     +  AR L+    T +PF+ N YPYF       Q   LNYA  +P
Sbjct:    6 GVCYGMVGDNLPSRSDVVQLYKSRN-IHAMRIYNPDQEALTALRGSGIFLILDVGGVDEVRRLGRDPSYAAGWVRSNVQAYYPDVLIRYIAVGNEVPAGDTGI----ILLAMQNVHNALASANLSSSIKVSTAVRFDVITNSFPPSSGVFRDPSGLVPIARFLD---STGAPFLANVYPYFAYRDDRGQNIRLNYATLQP 197          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19
Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = 2
Query:  113 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQTIFRYIVLGNEIL-ATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALF-KPNA 697
            +GV YG + NNLP   +V    K++  I R++L+D N   L A   +NI V + + N D+  +A  +  A+ WV  N+    P    +YI +GNEI   T    L +  +PA+  +  A+  A L + ++VST   + ++  S PPS G FR    R     I+ F R T++P + N YPYF         +L YALF  PNA
Sbjct:    1 LGVCYGMMGNNLPSHSEVIQLYKSRN-IGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDV-RWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNA 201          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19
Identity = 66/196 (33.67%), Postives = 103/196 (52.55%), Query Frame = 2
Query:  116 GVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEILATSD-KVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQT---LNYALF 685
            GV YG   N LP P  V + L  +  I R++++D +   L A   +NI + + V N D+  +A   A A +WV NN+  ++    FRYI +GNE+   ++    +  LL AMR +++A+  A L + ++VST    G+ + + PPS GRF+    R     I+ F    ++P + N YPYF +       L YALF
Sbjct:   27 GVCYGRQGNGLPSPADVVS-LCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNVR-NYGNVKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDV-RQFIEPIINFLVTNRAPLLVNLYPYFAIANNADIKLEYALF 219          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19
Identity = 70/205 (34.15%), Postives = 108/205 (52.68%), Query Frame = 2
Query:  101 AADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLP-AAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFAR-ILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALFKPNA 697
            A  SIGV  G + NNLP P  V    +++  ID +++++   + L A + T I V + VG   +P+LA  P AA +WV  N+    P   FRYI + NE++ ++ +   +++LPAMR ++ AL AA  S ++VST     + + + PPS G      D+  F R IL F  +   P + N YPYF  +       L +A F P +
Sbjct:   22 AVHSIGVCNGVLGNNLPAPSDVVTLYRSK-RIDAMRIYEPESKVLTALSGTGIAVLMDVGPA-LPSLASSPSAAAAWVKANV-SSFPGVSFRYIAVRNEVMDSAGQ---STILPAMRNVQRALAAAG-SPIKVSTSVRFDVFNNTSPPSNGVLA---DKSGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFATFVPGS 216          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19
Identity = 67/198 (33.84%), Postives = 101/198 (51.01%), Query Frame = 2
Query:  113 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQTIFRYIVLGNEIL-ATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALF 685
            +GV YG + NNLP   +V    K++  I R++L+D N   L A   +NI V + + N D+  +A  +  A+ WV  N+    P    +YI +GNEI   T    L +  +PA+  +  A+  A L + ++VST   + ++  S PPS G FR    R     I+ F R T++P + N YPYF         +L YALF
Sbjct:   27 LGVCYGMMGNNLPSHSEVIQLYKSRN-IGRLRLYDPNQGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDV-RWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 222          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19
Identity = 68/202 (33.66%), Postives = 100/202 (49.50%), Query Frame = 2
Query:  113 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALA-KLPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIAS-LLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALF-KPN 694
            IGV YG + NNLP   +V N  ++   I R++L+D N   L+A  ++ I + + V N D+  LA     A+ WV  N+L   P    +YI +GNE+         A  +LPA++ +  A+ A  L   ++VST   + ++  S PPS G FR G  R     I+ +     +P   N YPYF         +L YALF  PN
Sbjct:    2 IGVCYGMMGNNLPSANEVINLYRSNN-IRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWYAQYVLPAVQNVYQAVRAQGLHDQIKVSTAIDMTLIGNSYPPSQGSFR-GDVRSYLDPIIGYLLYASAPLHVNVYPYFSYSGNPRDISLPYALFTSPN 201          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19
Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 2
Query:  104 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQT----LNYALF 685
            A  IGV YG + + LP P  V    K Q  I R++L+  +P  L A   ++I + + V + D+  LA     A  WV  N+  +     FRYI +GNE+  +    +   LL AM+ +++A+  A L  V+VST  +    + + PPS GRFR  Y +     ++ F    +SP + N YPYF     T    L+YALF
Sbjct:   29 AGQIGVCYGMLGDTLPSPSDVVALYKQQN-IQRMRLYGPDPGALAALRGSDIELILDVPSSDLERLASSQTEADKWVQENVQSYRDGVRFRYINVGNEVKPS----VGGFLLQAMQNIENAVSGAGL-EVKVSTAIATDTTTDTSPPSQGRFRDEY-KSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALF 220          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19
Identity = 60/168 (35.71%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  203 VKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIAS-LLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQT----LNYALF 685
            ++++D N + L+A   + I + + V N  + +LA    AA +WV NN++ +     FRYI +GNE+L T      A  +LPAM+ ++SA+ +A L   ++VST     +L TS PPS G F       I   I+ F  +  SP + N YPYF     T    L+YALF
Sbjct:    1 MRIYDPNSDTLQALKGSGIELILDVPNTSLQSLASDASAASTWVQNNVVNYASDVKFRYIAVGNEVLPTGSNAQYAQYVLPAMKNVQSAITSAGLQGQIKVSTATYSSVLGTSYPPSAGSFSSDASSFI-NPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALF 167          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  113 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQTIFRYIVLGNEIL-ATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALF 685
            IGV YG + NNLP   +V    K++  I R++L+D N   L A   +NI V + + N D+  ++  +  A+ WV  N+    P    +YI +GNEI   T    L    +PA+  +  A+  A L + ++VST   + ++  S PPS G FR    R     I+ F R T++P + N YPYF         +L YALF
Sbjct:   27 IGVCYGMMGNNLPSHSEVIQLYKSRN-IRRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDV-RWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 222          
The following BLAST results are available for this feature:
BLAST of FC931975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
E13F_HORVU3.478e-2033.50Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
E13E_HORVU4.543e-2034.00Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E131_SOLTU1.322e-1934.48Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E13H_TOBAC2.255e-1933.67Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13C_HORVU2.255e-1934.15Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E132_SOLTU2.945e-1933.84Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13B_PHAVU5.023e-1933.66Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13A_ARATH5.023e-1933.67Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13B_VITVI6.560e-1935.71Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13B_SOLLC1.119e-1833.84Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]

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Properties
Property NameValue
Genbank descriptionC34203C02EF PostHarveN Citrus clementina cDNA clone C34203C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931975 ID=FC931975; Name=FC931975; organism=Citrus clementina; type=EST; length=708bp
GCTCCTTCGCTTCTCAATCATGGCTGTTACTGTTACTAAACTCTCTCAAT
TCCTCCTCTTCCTCTTCCTCTCCCTGTCTTGCAACGCCATCACCCCCTCC
GCCGCTGACTCCATCGGAGTCAACTACGGCGCCATCGCCAACAACCTCCC
GCCACCTCAGCAAGTAGCCAATTTCCTCAAAACCCAAACCACCATAGACC
GCGTCAAGCTCTTCGACGCCAACCCCGAATTCCTCCGCGCCTTCGCCCAC
ACAAACATCCCCGTCACCGTCACAGTCGGCAACGGCGACATACCTGCCCT
CGCAAAACTCCCCGCCGCCCAGTCCTGGGTCGCTAACAACATCCTGCCGC
ATCACCCCCAGACCATCTTCAGATACATCGTCCTCGGCAACGAAATCTTG
GCCACGTCGGATAAAGTCCTCATCGCTTCTCTCCTGCCCGCCATGAGAAC
TCTTAAATCAGCTCTCGATGCTGCCAATCTGAGCAGCGTCCAGGTGTCGA
CACCTCATTCCCTGGGGATTTTATCAACCTCTGAGCCGCCGAGTACCGGA
AGGTTCCGTAAAGGTTACGATAGGCTTATCTTTGCTAGGATTCTCGAGTT
CCACAGACAGACTAAATCCCCGTTTATGGGTAACCCCTACCCGTATTTTG
GGGTTCAGCCTCAGACGCTCAACTACGCTTTGTTTAAACCAAACGCGGCG
TTTTTGAT
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