FC931975

Overview
NameFC931975
Unique NameFC931975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 63/206 (30.58%), Postives = 100/206 (48.54%), Query Frame = 2
Query:   89 ITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALA-KLPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIAS-LLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYF----GVQPQTLNYALF 685
            + P+    IG+ YG + NNLPP  +V    K    I R++L+D N   L A   + I + + + N D+  LA    +A+ WV  N+L  +P    +YI +GNE+        +A  +LPA + +  A+ A  L   ++V+T   + ++  S PPS G FR    R      + +     +P + N YPYF      +  +L YALF
Sbjct:   26 LIPTTDAQIGICYGMMGNNLPPANEVIALYKANN-IKRMRLYDPNQPALNALRDSGIELILGIPNSDLQTLATNQDSARQWVQRNVLNFYPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNVYQAIRAQGLHDQIKVTTAIDMTLIGNSFPPSKGSFRSDV-RSYLDPFIGYLVYAGAPLLVNVYPYFSHIGNPRDISLPYALF 229          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 72/213 (33.80%), Postives = 109/213 (51.17%), Query Frame = 2
Query:   86 AITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALA-KLPAAQSWVANNILPH--HPQTIFRYIVLGNE-ILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEP-PSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ---TLNYALFKPNA 697
            A+    A SIG N+G  A++  PP  V   L+ +  I +VKLFDA  + LRA   + I V V + N  +  LA  L AA+ WVA N+  H        RY+ +GNE  L+T +   +++  PA+R ++ A+  A L + V+V+ P +  +  +S   PS G FR    R +   I++F  +   PF  N YPY  +       ++YA F  NA
Sbjct:   13 ALLCQRASSIGANWGTQASHPLPPDIVVRMLR-ENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANI-RDLMITIVKFLSENGGPFTVNIYPYISLYTNPDFPVDYAFFDGNA 223          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 73/207 (35.27%), Postives = 105/207 (50.72%), Query Frame = 2
Query:   86 AITPSAADSIGVNYGAIANNLPPPQQVANFLKTQ-TTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLP-AAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALF 685
            A  P+   SIGV YG   +NLPP   V    ++    + R+   DANP  L A + T+I + + V N D+ +LA  P AA +WV +N+     ++  RYI +GNE+          S+LPAM+ L +AL  A L  S++VST     + +   PPS G F +GY     A   ++ + T +P + N YPYF          L YALF
Sbjct:   21 AAIPTGVQSIGVCYGVNGDNLPPASDVVQLYQSNGINLLRIYFPDANP--LNALSGTSIGLIMDVPNTDLASLASDPSAAAAWVQSNVQASR-RSACRYIAVGNEVSGGD----TGSILPAMQNLNAALANAGLGGSIKVSTAVQSDV-TQGFPPSQGTFSQGY----MAPSRQYLQSTGAPLLSNVYPYFSYVGNPAQIDLKYALF 215          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 65/214 (30.37%), Postives = 114/214 (53.27%), Query Frame = 2
Query:   86 AITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPAL-AKLPAAQSWVANNILPHH---PQTIFRYIVLGNE-ILATSDKVLIASLLPAMRTLKSALDAANLSS-VQVSTPHSL-GILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ---TLNYALFKPNA 697
            ++T +   ++G+N+G  A++  PP +V   LK+   + +VKLFDA+P+ LRA + +NI VT+ + N  + +L A +  A+SWV +N+  +     +    Y+ +G E  L +        ++ A   +++AL  ANL++ V+V  P S    LS S  PS+G FR   ++ +   +L F  +  SPF     P+         +L+++LFK  A
Sbjct:   17 SLTGTTVRAVGINWGTEASHPLPPSKVVELLKSNGIV-KVKLFDADPKVLRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAMNIQNALVKANLANEVKVVVPSSFDSFLSESGRPSSGHFRADLNKTMI-ELLSFLTKHHSPFFVTISPFLSFHQNKNISLDFSLFKETA 228          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 63/189 (33.33%), Postives = 95/189 (50.26%), Query Frame = 2
Query:  140 NNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQTIFRYIVLGNEIL-ATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALF 685
            NNLP   +V    K++  I R++L+D N   L A   +NI V + + N D+  +A  +  A+ WV  N+    P    +YI +GNEI   T    L +  +PA+  +  A+  A L + ++VST   + ++  S PPS G FR    R     I+ F R T++P + N YPYF         +L YALF
Sbjct:    1 NNLPSHSEVIQLYKSRN-IGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDV-RWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 187          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 62/189 (32.80%), Postives = 99/189 (52.38%), Query Frame = 2
Query:  107 DSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALA-KLPAAQSWVANNILPHHPQ--TIFRYIVLGNE-ILATSDKVLIASLLPAMRTLKSALDAANLSS-VQVSTPHSLGIL-STSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGV 655
            + IGVN+G+ A +  PP  V   L+ +  I +VKLF+A+   L+A + T I V V + N  +  LA  + AA+ WV+ N+  H        RY+ +GNE  L   +       LPA++ ++SA+  A L++ V+V+ P +  +  S S  PS G FR    R +   I++F     +PF  N YP+  +
Sbjct:   25 EGIGVNWGSQARHPLPPATVVRLLR-ENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFEGITLPALQNIQSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEI-RDLMLNIVKFLSDNGAPFTINIYPFISL 211          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 2
Query:  239 AFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFG----VQPQTLNYALFKPNAA 700
            A   +NI + + V   D+ +L     A  WV +NI+ H P   F+YI +GN++   ++      + PAM+ + +AL AA L   ++VST    GIL+ + PP    FR  ++  I   I++F  Q   P + N YPYFG         L+YALF    A
Sbjct:    5 ALRGSNIEIILDVPLQDLQSLTDPSRANGWVQDNIINHFPDVKFKYIAVGNKVSPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGEFNSFI-NPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALFTQQEA 162          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 60/203 (29.56%), Postives = 103/203 (50.74%), Query Frame = 2
Query:  107 DSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHH--PQTIFRYIVLGNE-ILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILST--SEP-PSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPY---FGVQPQTLNYALF 685
            + +GVN+G +A +  PP+ V   LK    I++VKLFDA+   + A A + + V V + N  +  +     A+ WV  N+  ++        ++ +GNE  L + +   I    PA+  +++AL+ A L +SV+ + P +  +  +  S P PS GRFR      +  +I++F  +  +P   N YP+   +G     LNYA F
Sbjct:   23 NGLGVNWGTMATHKLPPKTVVQMLK-DNNINKVKLFDADETTMGALAGSGLEVMVAIPNDQLKVMTSYDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDIIGQM-TQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNYAFF 223          
The following BLAST results are available for this feature:
BLAST of FC931975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
E13B_PEA1.119e-1830.58Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E136_ARATH1.119e-1833.80Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E13B_MAIZE1.461e-1835.27Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E139_ARATH1.047e-1630.37Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]
E133_SOLTU1.047e-1633.33Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E135_ARATH1.975e-1532.80Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E13I_TOBAC9.802e-1533.33Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E138_ARATH1.280e-1429.56Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34203C02EF PostHarveN Citrus clementina cDNA clone C34203C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931975 ID=FC931975; Name=FC931975; organism=Citrus clementina; type=EST; length=708bp
GCTCCTTCGCTTCTCAATCATGGCTGTTACTGTTACTAAACTCTCTCAAT
TCCTCCTCTTCCTCTTCCTCTCCCTGTCTTGCAACGCCATCACCCCCTCC
GCCGCTGACTCCATCGGAGTCAACTACGGCGCCATCGCCAACAACCTCCC
GCCACCTCAGCAAGTAGCCAATTTCCTCAAAACCCAAACCACCATAGACC
GCGTCAAGCTCTTCGACGCCAACCCCGAATTCCTCCGCGCCTTCGCCCAC
ACAAACATCCCCGTCACCGTCACAGTCGGCAACGGCGACATACCTGCCCT
CGCAAAACTCCCCGCCGCCCAGTCCTGGGTCGCTAACAACATCCTGCCGC
ATCACCCCCAGACCATCTTCAGATACATCGTCCTCGGCAACGAAATCTTG
GCCACGTCGGATAAAGTCCTCATCGCTTCTCTCCTGCCCGCCATGAGAAC
TCTTAAATCAGCTCTCGATGCTGCCAATCTGAGCAGCGTCCAGGTGTCGA
CACCTCATTCCCTGGGGATTTTATCAACCTCTGAGCCGCCGAGTACCGGA
AGGTTCCGTAAAGGTTACGATAGGCTTATCTTTGCTAGGATTCTCGAGTT
CCACAGACAGACTAAATCCCCGTTTATGGGTAACCCCTACCCGTATTTTG
GGGTTCAGCCTCAGACGCTCAACTACGCTTTGTTTAAACCAAACGCGGCG
TTTTTGAT
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