FC931976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SP16H_HUMAN (FACT complex subunit SPT16 OS=Homo sapiens GN=SUPT16H PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.051e-38 Identity = 78/164 (47.56%), Postives = 109/164 (66.46%), Query Frame = 2 Query: 68 RERIKSTXDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 559 R ++K+ F+NF+ +V L + +LEF+ P R+LGF+G P++++ + PTSS LV E P V+TL E+E+++ ERV KNFDM IV+KD+ + V I++IP +SLD IKEWL++ DLKY E +LNW I+KTI DDPE F E GGW FL E Sbjct: 773 RHKLKTA--FKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPE 928
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_ASPOR (FACT complex subunit spt16 OS=Aspergillus oryzae GN=spt16 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.903e-38 Identity = 76/165 (46.06%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 68 RERIKSTXDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEA 562 R R +F+ F ++ D K ++ D P RE+GF GVP++++ I PT+ LV+L E PF+VITL+EIEI +LERV G KNFD+ VFKDF R + +++IP SL+G+K+WLD+ D+ + E LNLNW I+KT+ DP F DGGW FL E+ Sbjct: 800 RRRAALDREFKAFAEKIADAG-----KDEGVDVDIPFREIGFTGVPNRSNVLIQPTTDALVQLTEPPFLVITLNEIEIAHLERVQFGLKNFDLVFVFKDFHRPPVHVNTIPVESLEGVKDWLDSVDIAFTEGPLNLNWTTIMKTVVSDPYGFFADGGWSFLAAES 959
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_ASPFU (FACT complex subunit spt16 OS=Aspergillus fumigatus GN=spt16 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.903e-38 Identity = 77/165 (46.67%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 68 RERIKSTXDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEA 562 R R +F+ F ++ D K ++ D P RE+GF GVP++++ I PT+ LV+L E PF+VITL+EIEI +LERV G KNFD+ VFKDF R + I++IP SL+G+K+WLD+ D+ + E LNLNW I+KT+ DP F DGGW FL E+ Sbjct: 778 RRRAALDREFKAFAEKIADAG-----KDEGVDVDIPFREIGFTGVPNRSNVLIQPTTDALVQLTEPPFLVITLNEIEIAHLERVQFGLKNFDLVFVFKDFHRAPVHINTIPVESLEGVKDWLDSVDIAFTEGPLNLNWTTIMKTVVSDPYGFFADGGWSFLAAES 937
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_EMENI (FACT complex subunit spt16 OS=Emericella nidulans GN=spt16 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.761e-37 Identity = 76/165 (46.06%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 68 RERIKSTXDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEA 562 R R +F+ F ++ D K ++ D P RE+GF GVP++++ I PT+ LV+L E PF+VI+L+EIEI +LERV G KNFD+ VFKDF R + I++IP +L+G+K+WLD+ D+ Y E LNLNW I+KT+ DP F DGGW FL E+ Sbjct: 781 RRRAALDREFKAFAEKIADAG-----KDEGVDVDIPFREIGFTGVPNRSNVLIQPTTDALVQLTEPPFLVISLNEIEIAHLERVQFGLKNFDLVFVFKDFHRAPVHINTIPVENLEGVKDWLDSVDIAYTEGPLNLNWTTIMKTVVSDPYGFFADGGWSFLAAES 940
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SP16H_XENLA (FACT complex subunit SPT16 OS=Xenopus laevis GN=supt16h PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37 Identity = 77/161 (47.83%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 68 RERIKSTXDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFL 550 R ++K+ F+NF+ +V L + DLEF+ P R+LGF+G P++++ + PTSS LV E P V+TL E+E+V+ ERV KNFDM IV+K++ + V I++IP +SLD IKEWL++ D+KY E +LNW I+KTI DDPE F E GGW FL Sbjct: 775 RHKLKTA--FKNFIEKVESLTKE------DLEFEIPFRDLGFNGAPYRSTCLLQPTSSSLVNTTEWPPFVVTLDEVELVHFERVQFHLKNFDMVIVYKEYGKKVTMINAIPMASLDPIKEWLNSCDIKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFL 927
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_CAEEL (FACT complex subunit spt-16 OS=Caenorhabditis elegans GN=spt-16 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37 Identity = 77/175 (44.00%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 95 FQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXXXXXGYEPSD 619 F +F +V+ L EFD P LGF GVP++++ + PT+SCLV L E P ++TLSE+E+V+ ERV L KNFDM +FKD+K + IP SS+D IKEWL T D+ Y E +LNW ++KTITDD E F E+GGW FLN+E+ Y+P + Sbjct: 780 FNSFCEKVSRLTND------QFEFDSPFAGLGFFGVPYRSATTLKPTASCLVNLTEWPTFIVTLSEVELVHFERVSLQLKNFDMVFIFKDYKIKPQMVAQIPMSSIDKIKEWLHTCDIWYSEGIQSLNWAKVMKTITDDLEAFFEEGGWSFLNVESDNEEAMDDSDDSDAYDPEE 948
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_DEBHA (FACT complex subunit SPT16 OS=Debaryomyces hansenii GN=SPT16 PE=3 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 3.226e-37 Identity = 66/134 (49.25%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 158 LEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNME 559 ++ D P RELGF GVP ++S +PT CL++LI+ P++V+TL EIEI +LERV G KNFD+ VFKDF + V+ I++IP L+ +K WL D+ E ++NLNW I+KT+ DP +F DGGW FL E Sbjct: 823 VDLDIPFRELGFSGVPFRSSVLCMPTRDCLIQLIDPPYLVVTLEEIEIAHLERVQFGLKNFDLVFVFKDFNKSVVHINTIPMELLEDVKSWLTDVDIPISEGQMNLNWATIMKTVQSDPYQFFADGGWSFLTGE 956 HSP 2 Score: 26.5646 bits (57), Expect = 3.226e-37 Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 10 GGKRSAY---DPDEVEEEQRERARK 75 GG++ Y D DE+++EQ ER RK Sbjct: 777 GGRKRRYRYGDEDELQQEQEERRRK 801
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_YEAST (FACT complex subunit SPT16 OS=Saccharomyces cerevisiae GN=SPT16 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.210e-36 Identity = 74/163 (45.40%), Postives = 100/163 (61.35%), Query Frame = 2 Query: 158 LEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXXXXXGYEPS--DVQSDSVF 640 L + R+LGF GVP++++ F +PT+ CLV+LIE PF+VI L E+EI LERV G KNFDM V+KDF + V I+++P SLD +K+WL D+ Y S +NLNW I+K++ DDP +F DGGW FL + YE S DV +S F Sbjct: 823 LTVENTFRDLGFQGVPNRSAVFCMPTTDCLVQLIEPPFLVINLEEVEICILERVQFGLKNFDMVFVYKDFNKPVTHINTVPIESLDFLKQWLTDMDIPYTVSTINLNWATIMKSLQDDPYQFFLDGGWNFLATGSDDEASDESEEEVSEYEASEDDVSDESAF 985 HSP 2 Score: 24.6386 bits (52), Expect = 1.210e-36 Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 1 Query: 7 GGGKRSAY------DPDEVEEEQRERARK 75 GGG+R D DE+E+EQ ER ++ Sbjct: 773 GGGRRGQSRFRRYGDEDELEQEQEERRKR 801
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_ASHGO (FACT complex subunit SPT16 OS=Ashbya gossypii GN=SPT16 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.210e-36 Identity = 74/164 (45.12%), Postives = 99/164 (60.37%), Query Frame = 2 Query: 158 LEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEAXXXXXXXXXXXXXGYE-----PSDVQSDS 634 +E D P R+LGF GVP +++ F +PT CL++L+E PF+V+ LSE+EI LERV G KNFDM V+KDF + V I++IP L+ IK WL D+ Y S +NLNW I+K++ DDP +F DGGW FL + YE PSD + DS Sbjct: 819 VEVDHPFRDLGFQGVPSRSAVFCMPTRDCLIQLVEPPFLVVNLSEVEICILERVQFGLKNFDMVFVYKDFTKPVTHINTIPIEQLEFIKSWLTDVDIPYTVSTINLNWATIMKSLQDDPHQFFLDGGWSFLATGSDDEMSGTSEEEVSEYEVSDEDPSDEEVDS 982 HSP 2 Score: 23.0978 bits (48), Expect = 1.210e-36 Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 1 Query: 7 GGGKRSAY------DPDEVEEEQRERARK 75 G G+R+ D DE+E+EQ ER ++ Sbjct: 769 GNGRRNQMKFRRYGDEDELEQEQEERRKR 797
BLAST of FC931976 vs. ExPASy Swiss-Prot
Match: SPT16_CANAL (FACT complex subunit SPT16 OS=Candida albicans GN=SPT16 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.576e-36 Identity = 67/131 (51.15%), Postives = 90/131 (68.70%), Query Frame = 2 Query: 158 LEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFL 550 ++ D P RELGF GVP ++S VPT CLV+LI+ P++V+TL EIEI +LERV G KNFD+ VFKDF + V+ I++IP L+ +K WL D+ E ++NLNW I+KT+ DP +F DGGW FL Sbjct: 844 VDLDIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIAHLERVQFGLKNFDLVFVFKDFNKPVVHINTIPVELLEDVKSWLTDVDIPISEGQMNLNWVQIMKTVLADPYQFFIDGGWAFL 974 HSP 2 Score: 26.5646 bits (57), Expect = 1.576e-36 Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 10 GGKRSAY---DPDEVEEEQRERARK 75 GG++ Y D DE+++EQ ER RK Sbjct: 798 GGRKRKYRYGDEDELQQEQEERRRK 822 The following BLAST results are available for this feature:
BLAST of FC931976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931976 ID=FC931976; Name=FC931976; organism=Citrus clementina; type=EST; length=692bpback to top |