FC931987

Overview
NameFC931987
Unique NameFC931987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 8.910e-21
Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = 3
Query:    3 ADENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSSSGRTNKPVVIADCGQL 245
            ADENF+ KH+ PG+LSMAN GP TNGSQFF+ T    WLDG HVVF +V   M++V  IE +GS+SG     VVI DCG L
Sbjct:   81 ADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCGVL 161          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.520e-20
Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 3
Query:    3 ADENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSSSGRTNKPVVIADCGQL 245
            ADENF+ KH  PG+LSMAN GP TNGSQFF+      WLDGKHVVF +VV  ++++  +E  GS SG+T + +VI+DCG++
Sbjct:   90 ADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISDCGEI 170          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.520e-20
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 3
Query:    6 DENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMD-VV*AIEKVGSSSGRTNKPVVIADCGQL 245
            DENF+KKH   G+LSMAN GP TNGSQFF+    T WLDGKHVVF +V+   D VV A+EK GS SG+T+  + I DCG L
Sbjct:   83 DENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSGKTSSVLKIEDCGTL 163          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.592e-20
Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 3
Query:    3 ADENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSSSGRTNKPVVIADCGQL 245
            ADENF KKH   G+LSMAN GP TNGSQFF+ T    WLDGKHVVF +V   MD+V AIE  G++SG+    +VI + G+L
Sbjct:  102 ADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTASGKPRAEIVIEEAGEL 182          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.386e-20
Identity = 53/85 (62.35%), Postives = 58/85 (68.24%), Query Frame = 3
Query:    3 ADENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV--*RMDVV*AIEKVGSSSG--RTNKPVVIADCGQL 245
            ADENF KKH  PG+LSMAN GP TNGSQFFV T  T WLDG+HVVF +V     M VV A+E  GSSSG  R +K   I DCG L
Sbjct:  139 ADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSGAIRYSKKPTIVDCGAL 223          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.422e-20
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 3
Query:    6 DENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSS-SGRTNKPVVIADCGQLS 248
            DENF+ +HT PG+LSMAN GP +NGSQFF+ T  T WLDGKHVVF +V+  MDVV  IEK  ++   + N  VVIADCG LS
Sbjct:  115 DENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCGLLS 196          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 4.422e-20
Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 3
Query:    6 DENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSSSGRTNKPVVIADCGQL 245
            DENF+K H  PG+LSMAN GP TNGSQFF+ T    WLDGKHVVF +VV   D+V  +E +GS SG T   +V+A  G+L
Sbjct:   83 DENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGEL 162          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.775e-20
Identity = 48/81 (59.26%), Postives = 59/81 (72.84%), Query Frame = 3
Query:    6 DENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSSSG-RTNKPVVIADCGQL 245
            DENF+ KHTGPG+LSMAN G  TNGSQFF+CT  T WLD +HVVF  V+  MDVV A+E V +S G +  +P+ IA  G+L
Sbjct:  132 DENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGEL 212          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.851e-20
Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = 3
Query:    6 DENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSSSGRTNKPVVIADCGQL 245
            DENF+ KH+ PG+LSMAN GP TNGSQFF+ T  T WLDG+H VF +V+  MD+V  +E +GS SG  +K   I++ G+L
Sbjct:  118 DENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSGTPSKIAKISNSGEL 197          
BLAST of FC931987 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.680e-19
Identity = 51/82 (62.20%), Postives = 56/82 (68.29%), Query Frame = 3
Query:    6 DENFEKKHTGPGILSMANGGPGTNGSQFFVCTGNTEWLDGKHVVFSQVV*RMDVV*AIEKVGSSSGRTNK--PVVIADCGQL 245
            DENFE KHT  GILSMAN G  TNGSQFF+  G T+WLD KHVVF +VV  MDVV  I K GS SG+  K   + I DCG L
Sbjct:   88 DENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCGVL 169          
The following BLAST results are available for this feature:
BLAST of FC931987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
PPIA2_RHIOR8.910e-2159.26Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPI2_SYNY31.520e-2055.56Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CYPH_UROFA1.520e-2060.49Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
CYPC_YEAST2.592e-2058.02Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
CYPH_NEUCR3.386e-2062.35Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB2_RHIOR4.422e-2060.98Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
CYPH_YEAST4.422e-2057.50Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPIB_CRYNE5.775e-2059.26Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_DICDI9.851e-2055.00Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CYPH_ENCCU1.680e-1962.20Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]

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Properties
Property NameValue
Genbank descriptionC34203D06EF PostHarveN Citrus clementina cDNA clone C34203D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931987 ID=FC931987; Name=FC931987; organism=Citrus clementina; type=EST; length=481bp
TCGCCGATGAGAACTTCGAGAAGAAGCACACCGGCCCCGGAATCCTCTCC
ATGGCGAATGGCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTAC
GGGCAACACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCAGTCAAGTCG
TCTAACGAATGGACGTCGTCTAGGCCATCGAGAAAGTGGGGTCCAGCTCC
GGAAGGACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTA
TATTTGATCATGATAATGATCGCCATCATCACGAGCCGTCTGATCGCGAT
CGTGATGGTGATTATGTTATCTATTATTATGTGGCCGTGTCTGTAGGACT
TTTAATCTTTATCTAATTTTCCTGCTATGTTACTTGTTCGGGGTGGATCG
GGTCTCCGGTGGTGGTTCTTGATGAACTGTTTTTTATGTCTGTCTATGAG
CTGCCTTTTTAAATAAGATAGGGCTTGCCTT
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