FC931994

Overview
NameFC931994
Unique NameFC931994
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: DR4L2_HUMAN (Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 48/178 (26.97%), Postives = 92/178 (51.69%), Query Frame = 3
Query:  126 LMSKKHVKKEEIEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSASNTL*MG 659
            L S +  +++ + +KV  +T ++ GIG  IA++LA+  A +++S+R    +++    L G+       +  +  A   + L     K        G+D ++ NAA      + ++V+EE    T+++NV     +T+ + P M +RG G  V++SS A  +P+PG + Y+ S T  +G
Sbjct:   17 LASSRMTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVKLHG-----GIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLG 189          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y432_LISMO (Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes GN=lmo0432 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 53/167 (31.74%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDS---LRVAVE---KAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            I++KV+ ITGAS GIG+  A  LA  GAKL+L+AR   +LE++ + +  K    E      D+   ED+   + +A+E   K ++ F  AG+           P S    + E+  +  I++N+ G ++    + P  + +  GH +  SS AG    PG AVY A+
Sbjct:    3 IKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTI--KANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGI----------MPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGAT 157          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            + DK+  +TGA  GIGE IA  L   GAK++L+ RN  +L+ V  QL    A   VK++P D+ + E+   +     ++F    G+D +I N+A +   S   +   +   + I+VN+ GT+   +   P ML +  GH + ++S +G        +YSA+
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQL----AQDSVKVVPTDVTNKEEVDELMKIAQQTF---GGLDIVI-NSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSAT 156          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            + DK+  +TGA  GIGE IA  L   GAK++L+ RN  +L+ V  QL    A   VK++P D+ + E+   +     ++F    G+D +I N+A +   S   +   +   + I+VN+ GT+   +   P ML +  GH + ++S +G        +YSA+
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQL----AQDSVKVVPTDVTNKEEVDELMKIAQQTF---GGLDIVI-NSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSAT 156          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            + DKV  +TGA  GIGE IA  L   GAK++L+ RN  +L+ V  QL    +   VK++P D+ + E+   +     ++F    G+D +I N+A +   S   +   +   + I+VN+ GT+   +   P ML +  GH + ++S +G        +YSA+
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL----SQDSVKVVPTDVTNKEEVDELIKIAQQTF---GGLDIVI-NSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSAT 156          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            + DKV  +TGA  GIGE IA  L   GAK++L+ RN  +L+ V  QL    +   VK++P D+ + E+   +     ++F    G+D +I N+A +   S   +   +   + I+VN+ GT+   +   P ML +  GH + ++S +G        +YSA+
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL----SQDSVKVVPTDVTNKEEVDELIKIAQQTF---GGLDIVI-NSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSAT 156          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            + DKV  +TGA  GIGE IA  L   GAK++L+ RN  +L+ V  QL    +   VK++P D+ + E+   +     ++F    G+D +I N+A +   S   +   +   + I+VN+ GT+   +   P ML +  GH + ++S +G        +YSA+
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL----SQDSVKVVPTDVTNKEEVDELIKIAQQTF---GGLDIVI-NSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSAT 156          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: YI13_SCHPO (Uncharacterized oxidoreductase C521.03 OS=Schizosaccharomyces pombe GN=SPAC521.03 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 51/165 (30.91%), Postives = 89/165 (53.94%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLG-AKLILSARNAAELERVREQLVGKHAPAEVKILPLDL-ASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSASNT 647
            ++ K + ITGAS GIG+  A ++A++   KLIL+AR  + +E + ++L  K+   EV +LPL L  S   S+   +E     F  A +D +I+NA         ++++ +     I  NVLG +++TR + P    + KG  + + S AG+    G +VY ++ +
Sbjct:    4 LDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKY---EVSVLPLKLDVSDLKSIPGVIESLPKEF--ADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKS 163          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            + DK+  +TGA  GIGE IA  L   GAK++L+ RN  +L+ V  QL    +   VK++P D+ + E+   +     ++F    G+D +I N+A +   S   +   +   + I+VN+ GT+   +   P ML +  GH + ++S +G        +YSA+
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL----SQDSVKVVPTDVTNKEEVDELIKIAQQTF---GGLDIVI-NSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSAT 156          
BLAST of FC931994 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  159 IEDKVVWITGASRGIGEVIAKQLARLGAKLILSARNAAELERVREQLVGKHAPAEVKILPLDLASGEDSLRVAVEKAESFFPGAGVDYMIHNAAYERPKSTALEVSEESLKATINVNVLGTISLTRLLAPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSAS 641
            + DK+  +TGA  GIGE IA  L   GAK++L+ RN  +L+ V  QL    +   VK++P D+ + E+   +     ++F    G+D +I N+A +   S   +   +   + I+VN+ GT+   +   P ML +  GH + ++S +G        +YSA+
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL----SQDSVKVVPTDVTNKEEVDELIKIAQQTF---GGLDIVI-NSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSAT 156          
The following BLAST results are available for this feature:
BLAST of FC931994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
DR4L2_HUMAN2.688e-1426.97Dehydrogenase/reductase SDR family member 4-like 2... [more]
Y432_LISMO3.511e-1431.74Uncharacterized oxidoreductase Lmo0432 OS=Listeria... [more]
Y2478_STAAM3.511e-1431.06Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN3.511e-1431.06Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]
Y2778_STAA84.586e-1431.06Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]
Y2488_STAAC4.586e-1431.06Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]
Y2422_STAA34.586e-1431.06Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
YI13_SCHPO5.989e-1430.91Uncharacterized oxidoreductase C521.03 OS=Schizosa... [more]
Y2403_STAAW5.989e-1430.43Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS5.989e-1430.43Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]

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Properties
Property NameValue
Genbank descriptionC34203E03EF PostHarveN Citrus clementina cDNA clone C34203E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931994 ID=FC931994; Name=FC931994; organism=Citrus clementina; type=EST; length=688bp
GGTGTCTAACGACCCAACTGAAATTTCGTTAAGAAAAAATGCAAACTTTG
CTCTTCATTTTTCTACTTCTCCTTCTTCCCTTATTTATCCTCTTCAAATT
CGTCACTGCTGAAGGTGACTTCACGTTAATGTCAAAGAAGCATGTAAAGA
AAGAAGAAATAGAAGATAAGGTAGTTTGGATTACTGGGGCTAGCCGTGGA
ATCGGTGAGGTTATCGCTAAACAATTGGCAAGGCTAGGTGCGAAACTCAT
TCTTTCAGCACGAAATGCAGCTGAATTGGAGCGAGTTAGGGAGCAGCTGG
TAGGTAAGCACGCACCTGCTGAAGTGAAGATTTTACCTTTGGATTTGGCA
TCCGGTGAGGATTCACTTAGGGTGGCTGTAGAAAAAGCAGAATCCTTTTT
CCCAGGTGCCGGTGTTGATTATATGATCCACAATGCAGCTTATGAGCGCC
CCAAATCAACAGCTTTAGAAGTCTCGGAGGAAAGCCTCAAGGCTACAATC
AATGTCAATGTTCTGGGGACAATATCTCTTACACGGCTATTGGCACCCTT
CATGCTGAGGCGGGGAAAGGGTCATTTTGTTGTGATGAGCAGTGCTGCGG
GGAAGACACCTGCACCTGGTCAGGCTGTATACTCTGCTTCTAATACGCTC
TGAATGGGTACTTTCACACATTGCGTTCTGAGCTCTGT
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