FC932002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: YRBF_ECOL6 (Uncharacterized ABC transporter ATP-binding protein yrbF OS=Escherichia coli O6 GN=yrbF PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.273e-15 Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASGSLEG 595 ++G +PSELSGGM +R ALAR+I ++EP+++++DEP G DPI V+ LI + N + VVV+H + D L + KIV G ++ +P QF G +G Sbjct: 134 LRGAAKLMPSELSGGMARRAALARAI-------ALEPDLIMFDEPFVGQDPITMGVLVKLISEL---------NSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDGIADG 250 HSP 2 Score: 35.8094 bits (81), Expect = 1.273e-15 Identity = 18/50 (36.00%), Postives = 30/50 (60.00%), Query Frame = 3 Query: 30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 R+ ++FQS ALF + V +NV + L E++++ + V L AVGL+ Sbjct: 86 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR 135
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: YRBF_ECO57 (Uncharacterized ABC transporter ATP-binding protein yrbF OS=Escherichia coli O157:H7 GN=yrbF PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.273e-15 Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASGSLEG 595 ++G +PSELSGGM +R ALAR+I ++EP+++++DEP G DPI V+ LI + N + VVV+H + D L + KIV G ++ +P QF G +G Sbjct: 134 LRGAAKLMPSELSGGMARRAALARAI-------ALEPDLIMFDEPFVGQDPITMGVLVKLISEL---------NSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDGIADG 250 HSP 2 Score: 35.8094 bits (81), Expect = 1.273e-15 Identity = 18/50 (36.00%), Postives = 30/50 (60.00%), Query Frame = 3 Query: 30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 R+ ++FQS ALF + V +NV + L E++++ + V L AVGL+ Sbjct: 86 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR 135
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: GLUA_CORGL (Glutamate transport ATP-binding protein gluA OS=Corynebacterium glutamicum GN=gluA PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.278e-15 Identity = 37/102 (36.27%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 212 DRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 517 D+ P++LSGG ++RVA+AR++ ++ P+++L+DEPT+ LDP V D++ S+ K+G + V VTH+ R+A DR++F+ +G IV Sbjct: 131 DKYPAQLSGGQQQRVAIARAL-------AMNPKIMLFDEPTSALDPEMVNEVLDVMASLAKEG----------MTMVCVTHEMGFARKAADRVLFMADGLIV 215 HSP 2 Score: 34.2686 bits (77), Expect = 1.278e-15 Identity = 17/48 (35.42%), Postives = 27/48 (56.25%), Query Frame = 3 Query: 33 IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 +G+VFQS LF LT+++NV + KM+ + +L L VG+ Sbjct: 79 VGMVFQSFNLFPHLTIKDNVTLAPIKVRKMKKSEAEKLAMSLLERVGI 126
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN_LACGA (Methionine import ATP-binding protein metN OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=metN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.605e-15 Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 212 DRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHE-FTSSSNPXCSQFASGSLEGQ 598 D P++LSGG ++RVA+AR++ D P++L+ DE T+ LDP + + DL+ ++KK GL + V++TH+ ++R +++ + +GK++ +G E F QF G+L+ Q Sbjct: 139 DFYPAQLSGGQRQRVAIARALAND-------PDILISDEATSALDPKTTNQILDLLYDLNKK--LGL-------TIVLITHEMDAVKRVANKIAVMEKGKVIEKGDLREVFLHPQKQLTRQFVGGALQAQ 252 HSP 2 Score: 34.2686 bits (77), Expect = 3.605e-15 Identity = 19/50 (38.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 +IG++FQ+ L + TV ENV F L +++ + D+++ E L VGLK Sbjct: 87 KIGMIFQNFNLLNEETVIENVAFAL-QHTHLSDKELEEKSLHLLELVGLK 135
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: TCYN_BACSU (L-cystine import ATP-binding protein tcyN OS=Bacillus subtilis GN=tcyN PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.726e-15 Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 2 Query: 203 GVEDRL---PSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHE 538 G++D+L PS+LSGG K+RV +AR++ ++ P+VLL+DEPTA LDP V +++ + K G A+ +VVTH+ RR D+++F+ EG IV QG E Sbjct: 128 GLQDKLNAYPSQLSGGQKQRVGIARAL-------AIHPDVLLFDEPTAALDPELVGEVLEVMLEIVKTG----------ATMIVVTHEMEFARRVSDQVVFMDEGVIVEQGTPEE 225 HSP 2 Score: 26.1794 bits (56), Expect = 4.726e-15 Identity = 18/47 (38.30%), Postives = 23/47 (48.94%), Query Frame = 3 Query: 39 LVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 +VFQ LF TV ENV L KMR + + + L VGL+ Sbjct: 84 MVFQQYHLFAHKTVIENVMEGLTIARKMRKQDAYAVAENELRKVGLQ 130
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: GLNQ_BACSU (Glutamine transport ATP-binding protein glnQ OS=Bacillus subtilis GN=glnQ PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.156e-15 Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 212 DRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEF 541 D PS+LSGG ++RVA+AR + +++PEV+L+DEPT+ LDP V D+++++ K+G + VVVTH+ + DR++F+ EGKI+ + + EF Sbjct: 131 DAYPSQLSGGQQQRVAIARGL-------AMKPEVMLFDEPTSALDPEMIGEVLDVMKTLAKEG----------MTMVVVTHEMGFAKEVADRIVFIDEGKILEEAVPAEF 223 HSP 2 Score: 26.1794 bits (56), Expect = 6.156e-15 Identity = 15/48 (31.25%), Postives = 23/48 (47.92%), Query Frame = 3 Query: 33 IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 IG+VFQ L+ TV +N+ + + EQ E + L VG+ Sbjct: 79 IGMVFQHFHLYPHKTVLQNIMLAPVKVLRQSPEQAKETARYYLEKVGI 126
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: CBIO_METJA (Putative cobalt import ATP-binding protein cbiO OS=Methanocaldococcus jannaschii GN=cbiO PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.949e-14 Identity = 39/117 (33.33%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTS 547 ++G E++ P LSGG KKRVA+A + +++PEV++ DEPTAGLDP+ ++ + L+ ++KKG + ++ TH + D++ +Y+GKI+ +G E S Sbjct: 129 MEGFENKPPHHLSGGQKKRVAIAGIL-------AMQPEVIVLDEPTAGLDPVGASKIMKLLYDLNKKG----------MTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEVFS 228 HSP 2 Score: 26.5646 bits (57), Expect = 2.949e-14 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 3 Query: 33 IGLVFQSA--ALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 +GLVFQ+ +F + TV+E+V F N + E++ + VKE L AVG++ Sbjct: 82 VGLVFQNPDDQIF-APTVKEDVAFGPL-NLGLPKEEVEKRVKEALKAVGME 130
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: THIQ_SILST (Thiamine import ATP-binding protein thiQ OS=Silicibacter sp. (strain TM1040) GN=thiQ PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.969e-14 Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 2 Query: 203 GVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNP 559 G+E+R P+ELSGG + R ALAR ++ ++LL DEP A L P + DL++ + ENG+ + ++V+H RR D++I + EG++ TH + P Sbjct: 121 GLEERKPAELSGGQQSRAALARVLV-------QRRDILLLDEPFAALGPALKAEMLDLVKEI--TSENGV-------TLLMVSHDPDDARRIADQVILIAEGQLYPPAPTHALLDNPPP 223 HSP 2 Score: 36.5798 bits (83), Expect = 2.969e-14 Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 3 Query: 33 IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 + ++FQ LF LTVR+N G + N K+R ++ + V+E +A VGL Sbjct: 73 VAMLFQDGNLFPHLTVRQNAGLGIDPNRKLRPKE-RQTVEEAIARVGL 119
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: PSTB_AERPE (Phosphate import ATP-binding protein pstB OS=Aeropyrum pernix GN=pstB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.994e-14 Identity = 43/126 (34.13%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 170 WIKDLTEPWIQGVEDRL---PSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHE 538 W + W + V+DRL P +LSGG ++R++LAR++ +++P VLL DEPTA +DP+++ +E I K+ +A+ ++VTH R D+++FLYEG+++ G T E Sbjct: 127 WALKMAHLWDE-VKDRLSDYPHQLSGGQRQRLSLARAL-------ALKPRVLLLDEPTANIDPVSTVKIEQSIVEYAKE---------EMATVIIVTHTPQQAARISDQILFLYEGRVIEYGPTKE 235 HSP 2 Score: 22.7126 bits (47), Expect = 4.994e-14 Identity = 15/44 (34.09%), Postives = 21/44 (47.73%), Query Frame = 3 Query: 36 GLVFQSAALFDSLTVRENVGF-----LLYENSKMRDEQISELVK 152 G+VFQ F +T+ ENV L +N K DE + +K Sbjct: 87 GMVFQEPNPFPHMTIYENVAIGPKLHGLAKNKKELDEIVEWALK 130
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: ARTP_HAEIN (Arginine transport ATP-binding protein artP OS=Haemophilus influenzae GN=artP PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.002e-14 Identity = 42/126 (33.33%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQF 574 ++ + DR P LSGG ++RVA+AR+++ ++P+VLL+DEPTA LDP + V D+I+ + + G + V+VTH+ + ++ +++++ +GKIV G F NP QF Sbjct: 132 LEQLADRFPLHLSGGQQQRVAIARALM-------MKPQVLLFDEPTAALDPEITAQVVDIIKELQETG----------ITQVIVTHEVNVAQKVATKVVYMEQGKIVEMGSADCF---ENPKTEQF 237 HSP 2 Score: 22.7126 bits (47), Expect = 5.002e-14 Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3 Query: 33 IGLVFQSAALFDSLTVRENV 92 +G+VFQ L+ LTV EN+ Sbjct: 85 VGMVFQQYHLWPHLTVIENL 104 The following BLAST results are available for this feature:
BLAST of FC932002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 252
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932002 ID=FC932002; Name=FC932002; organism=Citrus clementina; type=EST; length=600bpback to top |