FC932002

Overview
NameFC932002
Unique NameFC932002
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN_RALME (Methionine import ATP-binding protein metN OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=metN PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.141e-12
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 2
Query:  206 VEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG 526
            + DR P+++SGG K+RV +AR++       + +P+VLL DE T+ LDP  +  + DL++ +++  E GL       + V++THQ   I++  DR+  L  G++V  G
Sbjct:  133 LRDRYPAQISGGQKQRVGIARAL-------ASKPKVLLSDEATSALDPETTRAILDLLKQINR--ELGL-------TIVMITHQMEVIKQVCDRVAVLEAGQVVESG 223          

HSP 2 Score: 27.7202 bits (60), Expect = 1.141e-12
Identity = 19/48 (39.58%), Postives = 25/48 (52.08%), Query Frame = 3
Query:   33 IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176
            IG++FQ   L  S TV +NV   L    K + E I+  V+  L  VGL
Sbjct:   84 IGMIFQHFNLLSSRTVYDNVALPLELAGKSKQE-IASTVEPLLELVGL 130          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN2_BACCR (Methionine import ATP-binding protein metN 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metN2 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.142e-12
Identity = 30/111 (27.03%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  203 GVEDRL---PSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG 526
            G+ED+    P +LSGG K+RV +AR++       +  P++L+ DE T+ LDP  +T + +L++ V+++            + +++TH+   ++    R+  + +GK++ +G
Sbjct:  129 GLEDKANYYPEQLSGGQKQRVGIARAL-------ATSPDILICDEATSALDPETTTEILNLLKKVNREYN---------LTILLITHEMHVVKEICHRVAVMEKGKVIEEG 223          

HSP 2 Score: 36.1946 bits (82), Expect = 1.142e-12
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179
            RIG++FQS  LF+S TV  N+ + L + +K+   +I E V E L  VGL+
Sbjct:   83 RIGMIFQSFNLFNSRTVFGNIAYPL-KLAKVPKNEIKERVNELLKFVGLE 131          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN2_BACC1 (Methionine import ATP-binding protein metN 2 OS=Bacillus cereus (strain ATCC 10987) GN=metN2 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.142e-12
Identity = 30/111 (27.03%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  203 GVEDRL---PSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG 526
            G+ED+    P +LSGG K+RV +AR++       +  P++L+ DE T+ LDP  +T + +L++ V+++            + +++TH+   ++    R+  + +GK++ +G
Sbjct:  129 GLEDKANNYPEQLSGGQKQRVGIARAL-------ATSPDILICDEATSALDPETTTEILNLLKKVNREYN---------LTILLITHEMHVVKEICHRVAVMEKGKVIEEG 223          

HSP 2 Score: 36.1946 bits (82), Expect = 1.142e-12
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179
            RIG++FQS  LF+S TV  N+ + L + +K+   +I E V E L  VGL+
Sbjct:   83 RIGMIFQSFNLFNSRTVFGNIAYPL-KLAKVPKNEIKERVNELLKFVGLE 131          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN2_BACAN (Methionine import ATP-binding protein metN 2 OS=Bacillus anthracis GN=metN2 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.142e-12
Identity = 30/111 (27.03%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  203 GVEDRL---PSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG 526
            G+ED+    P +LSGG K+RV +AR++       +  P++L+ DE T+ LDP  +T + +L++ V+++            + +++TH+   ++    R+  + +GK++ +G
Sbjct:  129 GLEDKANNYPEQLSGGQKQRVGIARAL-------ATSPDILICDEATSALDPETTTEILNLLKKVNREYN---------LTILLITHEMHVVKEICHRVAVMEKGKVIEEG 223          

HSP 2 Score: 36.1946 bits (82), Expect = 1.142e-12
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179
            RIG++FQS  LF+S TV  N+ + L + +K+   +I E V E L  VGL+
Sbjct:   83 RIGMIFQSFNLFNSRTVFGNIAYPL-KLAKVPKNEIKERVNELLKFVGLE 131          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN1_BACHK (Methionine import ATP-binding protein metN 1 OS=Bacillus thuringiensis subsp. konkukian GN=metN1 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.142e-12
Identity = 30/111 (27.03%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  203 GVEDRL---PSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG 526
            G+ED+    P +LSGG K+RV +AR++       +  P++L+ DE T+ LDP  +T + +L++ V+++            + +++TH+   ++    R+  + +GK++ +G
Sbjct:  129 GLEDKANNYPEQLSGGQKQRVGIARAL-------ATSPDILICDEATSALDPETTTEILNLLKKVNREYN---------LTILLITHEMHVVKEICHRVAVMEKGKVIEEG 223          

HSP 2 Score: 36.1946 bits (82), Expect = 1.142e-12
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179
            RIG++FQS  LF+S TV  N+ + L + +K+   +I E V E L  VGL+
Sbjct:   83 RIGMIFQSFNLFNSRTVFGNIAYPL-KLAKVPKNEIKERVNELLKFVGLE 131          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN1_BACCZ (Methionine import ATP-binding protein metN 1 OS=Bacillus cereus (strain ZK / E33L) GN=metN1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.482e-12
Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 2
Query:  209 EDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHE-FTSSSNPXCSQFASGS 586
            +D  PSELSGG K+RVA+AR++       S EPEVLL DE T+ LDP  +  + DL+  +++  E G+       + +++TH+ + I+R  DR+  +  G ++  G   E FT+  +    +F + +
Sbjct:  134 KDAYPSELSGGQKQRVAIARAL-------SHEPEVLLSDEATSALDPETTDSILDLLLKINE--EIGI-------TILLITHEMNVIQRICDRVAVMEHGAVIESGTVKEIFTNPQHVTTKKFVNSA 244          

HSP 2 Score: 24.2534 bits (51), Expect = 1.482e-12
Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLL 104
            +IG++FQ   L  ++TV EN+   L
Sbjct:   83 KIGMIFQGFNLLKTVTVYENIALPL 107          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN1_BACCR (Methionine import ATP-binding protein metN 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metN1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.482e-12
Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 2
Query:  209 EDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHE-FTSSSNPXCSQFASGS 586
            +D  PSELSGG K+RVA+AR++       S EPEVLL DE T+ LDP  +  + DL+  +++  E G+       + +++TH+ + I+R  DR+  +  G ++  G   E FT+  +    +F + +
Sbjct:  134 KDAYPSELSGGQKQRVAIARAL-------SHEPEVLLSDEATSALDPETTDSILDLLLKINE--EIGI-------TILLITHEMNVIQRICDRVAVMEHGAVIESGTVKEIFTNPQHVTTKKFVNSA 244          

HSP 2 Score: 24.2534 bits (51), Expect = 1.482e-12
Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLL 104
            +IG++FQ   L  ++TV EN+   L
Sbjct:   83 KIGMIFQGFNLLKTVTVYENIALPL 107          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN2_LISMF (Methionine import ATP-binding protein metN 2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metN2 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.482e-12
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 2
Query:  197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG 526
            ++G E+  PSELSGG K+RV +AR++       +  P+VLL DE T+ LDP  +  V +L+  ++K+            + +V+TH+   IR+  +R+  +  GK+V  G
Sbjct:  130 LEGKENAYPSELSGGQKQRVGIARAL-------ANNPKVLLCDEATSALDPQTTDEVLELLLDINKRLH---------LTIIVITHEMHVIRKICNRVAVMENGKVVELG 223          

HSP 2 Score: 29.6462 bits (65), Expect = 1.482e-12
Identity = 20/50 (40.00%), Postives = 29/50 (58.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179
            +IG++FQ   L  S TV EN+ F L E + +R E+    V E +  VGL+
Sbjct:   83 QIGMIFQHFNLLWSRTVAENIAFPL-EIAGVRGEKRRFRVNELIRLVGLE 131          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN2_BACCZ (Methionine import ATP-binding protein metN 2 OS=Bacillus cereus (strain ZK / E33L) GN=metN2 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.483e-12
Identity = 30/111 (27.03%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  203 GVEDRL---PSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG 526
            G+ED+    P +LSGG K+RV +AR++       +  P++L+ DE T+ LDP  +T + +L++ V+++            + +++TH+   ++    R+  + +GK++ +G
Sbjct:  129 GLEDKANNYPEQLSGGQKQRVGIARAL-------ATSPDILICDEATSALDPETTTEILNLLKKVNREYN---------LTILLITHEMHVVKEICHRVAVMEKGKVIEEG 223          

HSP 2 Score: 35.8094 bits (81), Expect = 1.483e-12
Identity = 22/50 (44.00%), Postives = 31/50 (62.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179
            RIG++FQS  LF+S TV  N+ + L   +K+   +I E V E L  VGL+
Sbjct:   83 RIGMIFQSFNLFNSRTVFGNIAYPL-RLAKVPKNEIKERVNELLKFVGLE 131          
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN_XANOM (Methionine import ATP-binding protein metN OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=metN PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.483e-12
Identity = 42/129 (32.56%), Postives = 69/129 (53.49%), Query Frame = 2
Query:  197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG-MTHEFTSSSNPXCSQFAS 580
            +Q   ++ P++LSGG K+RV +AR++       +  P++LL DE T+ LDP  +  V  L+  +++  E GL       + V++TH+   IRR  DR+  L  GK+V  G +T  F    +    +F S
Sbjct:  130 LQEQANQYPAQLSGGQKQRVGIARAL-------ATGPQILLCDEATSALDPQTTASVLQLLAQINR--ELGL-------TIVLITHEMDVIRRVCDRVAVLDAGKLVETGPVTEVFLHPKHVTTRRFVS 242          

HSP 2 Score: 30.8018 bits (68), Expect = 1.483e-12
Identity = 23/50 (46.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:   30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179
            RIG++FQ   L  S TV  NV F L      R E I   V E LA VGL+
Sbjct:   83 RIGMIFQHFNLLSSRTVAGNVAFPLELVGTPRAE-IDARVAELLARVGLQ 131          
The following BLAST results are available for this feature:
BLAST of FC932002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
METN_RALME1.141e-1234.58Methionine import ATP-binding protein metN OS=Rals... [more]
METN2_BACCR1.142e-1227.03Methionine import ATP-binding protein metN 2 OS=Ba... [more]
METN2_BACC11.142e-1227.03Methionine import ATP-binding protein metN 2 OS=Ba... [more]
METN2_BACAN1.142e-1227.03Methionine import ATP-binding protein metN 2 OS=Ba... [more]
METN1_BACHK1.142e-1227.03Methionine import ATP-binding protein metN 1 OS=Ba... [more]
METN1_BACCZ1.482e-1233.86Methionine import ATP-binding protein metN 1 OS=Ba... [more]
METN1_BACCR1.482e-1233.86Methionine import ATP-binding protein metN 1 OS=Ba... [more]
METN2_LISMF1.482e-1233.64Methionine import ATP-binding protein metN 2 OS=Li... [more]
METN2_BACCZ1.483e-1227.03Methionine import ATP-binding protein metN 2 OS=Ba... [more]
METN_XANOM1.483e-1232.56Methionine import ATP-binding protein metN OS=Xant... [more]

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Properties
Property NameValue
Genbank descriptionC34203F01EF PostHarveN Citrus clementina cDNA clone C34203F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932002 ID=FC932002; Name=FC932002; organism=Citrus clementina; type=EST; length=600bp
TGATGGCATTATGAGAAAGTAGTGTGCTTCGGATTGGATTGGTTTTCCAA
AGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGAAAATGTTGGTTTCCT
TCTGTATGAAAATTCGAAGATGCGTGATGAACAAATTTCAGAGCTTGTGA
AGGAAAATTTGGCTGCTGTTGGATTAAAGATCTGACTGAGCCTTGGATCC
AGGGAGTTGAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAA
AGAGTTGCTTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCGGT
GGAGCCAGAGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCA
TTGCATCCACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGT
GAAAATGGACTTGCGAACCCTGGTAATATTGCTTCCTACGTGGTTGTTAC
TCACCAACATAGTACCATTAGAAGAGCTGTTGACAGGTTGATATTCCTCT
ACGAGGGTAAGATTGTTTGGCAAGGAATGACCCATGAATTCACATCATCA
TCCAATCCAANTTGTTCACAGTTTGCATCAGGGAGCTTGGAAGGCCAATC
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