FC932009

Overview
NameFC932009
Unique NameFC932009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  277 DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 693
            D+S E +V +++ TAV K+G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D
Sbjct:  132 DVSKEADVDSMMKTAVDKWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED 268          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 64/206 (31.07%), Postives = 100/206 (48.54%), Query Frame = 1
Query:  100 FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKLVI-----ADVQDKLGEELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACT-EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 696
            +K LEGKV                 F    AK+V+      D  + + EE   K+G +   +  D++ E +VINLV +A+ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S    +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP
Sbjct:    2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP 205          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 62/205 (30.24%), Postives = 101/205 (49.27%), Query Frame = 1
Query:  100 FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKLVI-----ADVQDKLGEELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 696
            +K LEGKV                 F    AK+V+      +  + + EE+  K+G +   +  D++ E +VINLV +++ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP
Sbjct:    2 YKDLEGKVVVITGSSTGLGKAMAIRFATEKAKVVVNYRSKEEEANSVLEEIK-KVGGEAIAVKGDVTVESDVINLVQSSIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP 203          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: VER1_ASPPA (Versicolorin reductase OS=Aspergillus parasiticus GN=ver1 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 62/195 (31.79%), Postives = 94/195 (48.21%), Query Frame = 1
Query:  106 RLEGKVXXXXXXXXXXXXXXVELFHENGAKLVI-----ADVQDKLGEELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 672
            RL+GKV                   E GAK+V+      +  +K+ E++    G D   I  D+ + +    L+   V  FG LDI+ +NAGI+  SFG + D    + +R+  VNT G F  A+ A R M  ++ G I+ T+S    + G+   A Y+ SK  I   V+C+A + G   I VN V+P  + T M
Sbjct:    6 RLDGKVALVTGAGRGIGAAIAVALGERGAKVVVNYAHSREAAEKVVEQIKAN-GTDAIAIQADVGDPEATAKLMAETVRHFGYLDIVSSNAGIV--SFGHLKDVTPEEFDRVFRVNTRGQFFVAREAYRHM--REGGRIILTSSNTACVKGVPKHAVYSGSKGAIDTFVRCMAIDCGDKKITVNAVAPGAIKTDM 195          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 53/168 (31.55%), Postives = 91/168 (54.17%), Query Frame = 1
Query:  187 GAKLVIADVQDKLGEE-----LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 672
            GAKL + DV  +  E      L      +V     D+S+E +V   V     +FG++D  +NNAGI  +   +   T  ++ ++++++N  G FLG +   ++M  Q  G ++ TAS    I G+G+ + Y  +K+G++GL +  A E G+YGIR+N ++P  + T M
Sbjct:   37 GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTA-AEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASV-GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 202          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: HDHA_ECOLI (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli (strain K12) GN=hdhA PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 59/204 (28.92%), Postives = 92/204 (45.10%), Query Frame = 1
Query:  106 RLEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEELADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 696
            RL+GK                  F   GA +V++D+       + D+   LG       CDI++E E+  L D A+SK GK+DI+ NNAG          D P +D  R   +N    F    H ++++ P+ +    G IL   S   E   +   +Y  SK     LV+ +A +LG+  IRVN ++P  + T  ++K  + P
Sbjct:    8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF----HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD-ALKSVITP 203          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: HDHA_ECO57 (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli O157:H7 GN=hdhA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 59/204 (28.92%), Postives = 92/204 (45.10%), Query Frame = 1
Query:  106 RLEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEELADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 696
            RL+GK                  F   GA +V++D+       + D+   LG       CDI++E E+  L D A+SK GK+DI+ NNAG          D P +D  R   +N    F    H ++++ P+ +    G IL   S   E   +   +Y  SK     LV+ +A +LG+  IRVN ++P  + T  ++K  + P
Sbjct:    8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF----HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD-ALKSVITP 203          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 1
Query:  268 IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 675
            I  DI+N +E+   +D     FG++DI+ NNAGI+      +++    D   ++NVN    F  +K   R M+  ++G I+   S    I   G   Y+ +K G++G  K LA EL   GI VN ++P  + TGM+
Sbjct:   57 IKLDITNPNEITKTMDFVYKNFGRVDILINNAGIIRDKL--LINMKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMT 190          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 50/170 (29.41%), Postives = 85/170 (50.00%), Query Frame = 1
Query:  169 ELFHENGAKLVIADVQDKLGEELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM 678
            +L  +   K+ +     ++ +  A ++G  +  + CD+S E+E+ +      +  G +D + N+AGI  R    +L T   D+  L++VN +G     K A R M+ QQ G I+   S       +G   Y  SK G++G  K LA E+ +  IRVN V+P  + T M++
Sbjct:   20 KLLAQRDYKVAVISRDLEVAKAAAAEVGAHLA-LSCDVSKENEIQDTFKEITNNLGNVDYLVNSAGI--RRDALLLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTL 186          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.645e-14
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 1
Query:  169 ELFHENGAKL-VIADVQDKLGEELADKLG----QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 675
            +LF ENGAK+ +  + Q+++   LA        ++V     D+++ D V+  V T   K+G+LD+M NNAGI   S  S +   + D + ++++N  G F GA  A + M   ++G I+ TAS       L    Y  SK G++GL   L  E+ +  IRV  V+P  + T M+
Sbjct:   24 KLFIENGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGTVAQKYGRLDVMINNAGITMNSVFSRVS--EEDFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMT 195          
The following BLAST results are available for this feature:
BLAST of FC932009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
FABG5_BRANA3.314e-1534.533-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
DHGB_BACME4.328e-1531.07Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
DHG1_BACME5.652e-1530.24Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
VER1_ASPPA7.382e-1531.79Versicolorin reductase OS=Aspergillus parasiticus ... [more]
LVR_LEIAQ1.259e-1431.55Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
HDHA_ECOLI1.259e-1428.927-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HDHA_ECO571.259e-1428.927-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
FABG_BUCBP1.645e-1433.093-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
CBR4_XENTR1.645e-1429.41Carbonyl reductase family member 4 OS=Xenopus trop... [more]
BAIA1_EUBSP1.645e-1432.76Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]

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Properties
Property NameValue
Genbank descriptionC34203F10EF PostHarveN Citrus clementina cDNA clone C34203F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932009 ID=FC932009; Name=FC932009; organism=Citrus clementina; type=EST; length=701bp
GAAGCCATACCTAGTTTCTTGTTTCTAACCCCTTCTCTGCTTTTAATTAG
TTTCAGGTTTTTGAAGAAAAAAATGAACGGCCCTTCCTCTGCAGCTCCCT
TCAAAAGGTTAGAAGGCAAAGTGGCAATCATCACCGGAGGAGCAAGCGGC
ATCGGAGCAACGGCGGTTGAACTCTTCCATGAAAATGGCGCCAAACTTGT
TATTGCCGATGTCCAGGATAAGCTTGGCGAAGAACTTGCTGATAAGCTGG
GCCAAGATGTTTGCTACATCCATTGTGATATCTCAAATGAAGATGAAGTC
ATCAATCTCGTTGATACCGCCGTTTCTAAATTTGGAAAGCTCGATATCAT
GTACAACAATGCAGGAATTCTTGACCGCAGCTTTGGGAGCATTTTGGACA
CTCCAAAGTCTGATCTAGAACGCTTAATTAATGTAAACACTATAGGTGGT
TTCTTAGGAGCCAAGCATGCTGCAAGAGTCATGGTGCCACAGCAAAAAGG
TTGCATACTGTTTACAGCTAGTGCTTGTACAGAAATTGCAGGGCTTGGCT
CCCCTGCTTATACAATATCCAAATATGGGATTTTAGGACTAGTAAAGTGC
TTGGCAGCAGAGCTTGGACAGTATGGAATAAGAGTAAATTGCGTCTCGCC
TTATGGTTTGGCGACAGGAATGTCGATGAAAGGTGGGGTCGATCCGGCTC
T
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