FC932010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.299e-51 Identity = 100/196 (51.02%), Postives = 146/196 (74.49%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEML--SRGFKGSIYDVYRYLPPDLQVVLI 704 K+ F+T++ ++ +F++M +KDDLLRGIY YGFE PSAIQ RA+ II G DVIAQAQSGTGKT+ + + Q +D +++QAL+LSPTRELA+Q +V+ +GD++N+Q++A GK++ +D+ +++ +G VVSGTPGRV DM KR L TR +++L+LDE+DE+L S GFK IYD++ LP QVV++ Sbjct: 10 KLKFKTSKKLKISPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPGRVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAACQVVVV 205
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.696e-51 Identity = 98/182 (53.85%), Postives = 130/182 (71.43%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVL 701 E + F+A+ ++ DLLRGI+ YGFEKPSAIQQR + I+ G D I QAQSGTGKT+ + Q +D S Q L+L+PTRELA Q +KV L +GD+ ++ HACV G SV +D+ KL+ GVH+V GTPGRV DM+ + LR +KL +LDE+DEMLSRGFK I+D+++ LP D+QV L Sbjct: 28 EIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQDVQVAL 209
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.875e-50 Identity = 103/187 (55.08%), Postives = 134/187 (71.66%), Query Frame = 3 Query: 150 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHAC---VEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVL 701 GV I SFD M + +LLRGIY YGFEKPS+IQQRA+ +G D+IAQAQSGTGKT ++ + Q +D +Q L+LSPTRELA QT +VI IG+F++ A C V G V +D+RKL+ GV V GTPGRV D+IKR LRT ++++LVLDE+DEMLS+GF IY+++R+LP D+QV L Sbjct: 21 GVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLRKLQAGVVVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVAL 207
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.178e-50 Identity = 102/187 (54.55%), Postives = 134/187 (71.66%), Query Frame = 3 Query: 150 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHAC---VEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVL 701 GV I SFD M + +LLRGIY YGFEKPS+IQQRA+ +G D+IAQAQSGTGKT ++ + Q +D +Q L+LSPTRELA QT +VI IG+F++ + C V G V +D+RKL+ GV V GTPGRV D+IKR LRT ++++LVLDE+DEMLS+GF IY+++R+LP D+QV L Sbjct: 21 GVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVAL 207
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.178e-50 Identity = 102/187 (54.55%), Postives = 134/187 (71.66%), Query Frame = 3 Query: 150 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHAC---VEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVL 701 GV I SFD M + +LLRGIY YGFEKPS+IQQRA+ +G D+IAQAQSGTGKT ++ + Q +D +Q L+LSPTRELA QT +VI IG+F++ + C V G V +D+RKL+ GV V GTPGRV D+IKR LRT ++++LVLDE+DEMLS+GF IY+++R+LP D+QV L Sbjct: 21 GVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVAL 207
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.588e-49 Identity = 93/181 (51.38%), Postives = 131/181 (72.38%), Query Frame = 3 Query: 162 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 + FD + +K +++RGI+ YG+E PSAIQQRA++ I +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + VI IG ++N+ HA + G S+ +DI + GV +V GTPGRV DMI+R+ RT +K+ +LDE+DEMLS GFK IY+++R LP QVVL+ Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMSDDIEAFKSGVQIVVGTPGRVFDMIERRYFRTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQVVLL 202
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.708e-49 Identity = 93/181 (51.38%), Postives = 132/181 (72.93%), Query Frame = 3 Query: 162 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 + SFD + +K +++RGI+ YG+E PSAIQQRA++ I +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + VI IG ++N+ HA + G S+ +DI + GV +V GTPGRV DMI+R+ RT +K+ ++DE+DEMLS GFK IY+++R LP QVVL+ Sbjct: 21 VYSFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENLKATQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGTPGRVFDMIERRFFRTDKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLL 201
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.537e-49 Identity = 92/181 (50.83%), Postives = 132/181 (72.93%), Query Frame = 3 Query: 162 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 + +FD + +K +++RGI+ YG+E PSAIQQRA++ I +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + VI IG ++N+ HA + G S+ +DI + GV +V GTPGRV DMI+R+ +T +K+ +LDE+DEMLS GFK IY+++R LP QVVL+ Sbjct: 22 VYTFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGTPGRVFDMIERRFFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQVVLL 202
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.619e-49 Identity = 92/183 (50.27%), Postives = 131/183 (71.58%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 + + SFD + +K++LLRGI+ YGF +PSAIQQRA++ II+G+DV+AQAQSGTGKT ++ Q +D + Q LIL+PTRELA Q +KV++ + ++++ HAC+ G S+ ED L G ++ GTPGRV DMI R+ +T IK+ +LDE+DEMLS GFK IY+++ LPP QVVL+ Sbjct: 19 KVVYSFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVKVHACIGGTSLQEDSEALRGGAQIIVGTPGRVFDMIDRRIFKTDNIKMFILDEADEMLSTGFKEQIYNIFTMLPPTSQVVLL 201
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.033e-49 Identity = 92/181 (50.83%), Postives = 130/181 (71.82%), Query Frame = 3 Query: 162 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 + FD + +K +++RGI+ YG+E PSAIQQRA++ I +GRDV+AQAQSGTGKT+ ++ Q +D + + QALIL+PTRELA Q + VI IG ++N+ HA + G S+ +DI GV VV GTPGRV DMI+R+ +T +K+ ++DE+DEMLS GFK IY+++R LP QVVL+ Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLL 202 The following BLAST results are available for this feature:
BLAST of FC932010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932010 ID=FC932010; Name=FC932010; organism=Citrus clementina; type=EST; length=706bpback to top |