FC932010

Overview
NameFC932010
Unique NameFC932010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_COCIM (ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis GN=FAL1 PE=3 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 5.803e-68
Identity = 121/193 (62.69%), Postives = 158/193 (81.87%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            ++ F T++ V    +FD M +K++LLRGIY YGFE PSAIQ RA++ I KGRD IAQAQSGTGKT+  A+++ Q +DT+ RE QAL+LSPTRELATQ + VI+ +GD++N+Q HAC+ G +VG+DIRKL+HG HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+D++L+RGF+  IYDVYRYLPP  QVV++
Sbjct:   12 RIEFTTSKEVTVAPTFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYMNVQCHACIGGTNVGDDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLLARGFREQIYDVYRYLPPATQVVVL 204          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_AJECN (ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.205e-67
Identity = 119/193 (61.66%), Postives = 157/193 (81.35%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            +M F T++ V    +F+ M +K++LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT  RE QAL+LSPTRELATQ + V++ +GD++N+Q HAC+ G +VGEDIRKL+HG HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF+  IYDVYRYLPP  QVV++
Sbjct:   12 RMEFTTSKEVTVAPTFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVLRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVV 204          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.416e-67
Identity = 117/188 (62.23%), Postives = 155/188 (82.45%), Query Frame = 3
Query:  141 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            T+E V A++SF+ M +K+DLLRGIY YG+E PSA+Q RA++ I KGRDVIAQAQSGTGKT+  ++ + Q++D S R+ QALILSPTRELA Q + V+L +GD +N+Q HAC+ G SVG DI+KL++G HVVSGTPGRV DMI+R+ LRTR +K+L+LDE+DE+L++GFK  IYD+YRYLPP  QVV++
Sbjct:   13 TSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVV 200          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_ASPTN (ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=fal1 PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.380e-67
Identity = 119/193 (61.66%), Postives = 156/193 (80.83%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            +M F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  A+++ Q +DT  RE QAL+LSPTRELATQ + VI+ +GD++N+Q HAC+ G ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF+  IYDVYRYLPP  QVV++
Sbjct:   12 RMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVV 204          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_GIBZE (ATP-dependent RNA helicase FAL1 OS=Gibberella zeae GN=FAL1 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.094e-66
Identity = 115/193 (59.59%), Postives = 159/193 (82.38%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            +M F T++ V    +F++M +K++LLRGIY YG+E PSA+Q RA++ + KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + V++ +GD++N+Q HAC+ G +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L++GF+  IYDVYRYLPP  QVV++
Sbjct:   14 RMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVVV 206          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.094e-66
Identity = 119/193 (61.66%), Postives = 155/193 (80.31%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            KM F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  +++  Q +DT  RE QAL+LSPTRELATQ + VI+ +GD++N+Q HAC+ G ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF+  IYDVYRYLPP  QVV++
Sbjct:   12 KMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVV 204          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_ASPCL (ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus GN=fal1 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.094e-66
Identity = 117/193 (60.62%), Postives = 157/193 (81.35%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            ++ F T++ V    +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + VI+ +GD++N+Q HAC+ G ++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF+  IYDVYRYLPP  QVV++
Sbjct:   12 RLEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVV 204          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_SCLS1 (ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.429e-66
Identity = 117/193 (60.62%), Postives = 156/193 (80.83%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            +M F T+  V    +F  M +K++LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + V++ +GD++N+Q HAC+ G +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF+  IYDVYRYLPP  QVV++
Sbjct:   12 RMEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVV 204          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.429e-66
Identity = 117/193 (60.62%), Postives = 156/193 (80.83%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            +M F T+  V    +F  M +K++LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + V++ +GD++N+Q HAC+ G +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF+  IYDVYRYLPP  QVV++
Sbjct:   12 RMEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVV 204          
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.867e-66
Identity = 116/193 (60.10%), Postives = 158/193 (81.87%), Query Frame = 3
Query:  126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704
            K+ F T++ V    +F++M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQSGTGKT+  ++++ Q +DT+ RE QAL+LSPTRELATQ + V++ +GD++N+Q HAC+ G +VGEDIRKL++G H+VSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L++GF+  IYDVYRYLPP  QVV++
Sbjct:   13 KIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVV 205          
The following BLAST results are available for this feature:
BLAST of FC932010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_COCIM5.803e-6862.69ATP-dependent RNA helicase FAL1 OS=Coccidioides im... [more]
FAL1_AJECN2.205e-6761.66ATP-dependent RNA helicase FAL1 OS=Ajellomyces cap... [more]
FAL1_SCHPO6.416e-6762.23ATP-dependent RNA helicase fal1 OS=Schizosaccharom... [more]
FAL1_ASPTN8.380e-6761.66ATP-dependent RNA helicase fal1 OS=Aspergillus ter... [more]
FAL1_GIBZE1.094e-6659.59ATP-dependent RNA helicase FAL1 OS=Gibberella zeae... [more]
FAL1_EMENI1.094e-6661.66ATP-dependent RNA helicase fal1 OS=Emericella nidu... [more]
FAL1_ASPCL1.094e-6660.62ATP-dependent RNA helicase fal1 OS=Aspergillus cla... [more]
FAL1_SCLS11.429e-6660.62ATP-dependent RNA helicase fal1 OS=Sclerotinia scl... [more]
FAL1_BOTFB1.429e-6660.62ATP-dependent RNA helicase fal1 OS=Botryotinia fuc... [more]
FAL1_NEUCR1.867e-6660.10ATP-dependent RNA helicase fal-1 OS=Neurospora cra... [more]

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Properties
Property NameValue
Genbank descriptionC34203F11EF PostHarveN Citrus clementina cDNA clone C34203F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932010 ID=FC932010; Name=FC932010; organism=Citrus clementina; type=EST; length=706bp
GACCTGGAAGAGGAAACTCTCATTGATTCTTTGATTTCGAAGAGCAATTG
TTGCGACTTTCGTGCGAGATGGCGGCGGCGACGGCTATGCGGAGGAGAGG
AGGGGGCGGCGGAATGGATGACGACAAGATGGTGTTCGAAACAACGGAAG
GAGTGGAGGCAATCACGAGCTTCGACGCAATGGGAATAAAAGACGATCTG
TTGCGTGGAATTTATCAGTACGGATTCGAGAAGCCATCGGCCATACAACA
GAGGGCCGTTATGGCGATAATAAAGGGCCGTGATGTAATTGCACAGGCCC
AGTCTGGTACTGGCAAGACCTCTATGATTGCCCTAACTGTTTGCCAGACG
GTCGATACTTCTAGCAGAGAGGTGCAGGCGTTGATTTTGTCACCTACGAG
GGAGCTGGCGACGCAGACAGAGAAAGTGATTTTGGTAATTGGTGATTTTA
TTAACATACAAGCACATGCGTGTGTTGAAGGCAAAAGTGTCGGGGAGGAT
ATTAGGAAGTTAGAGCATGGAGTTCATGTGGTGTCTGGAACTCCGGGTAG
AGTCTGTGATATGATTAAGAGGAAAACTTTGCGTACTAGAGCTATTAAAT
TATTGGTGCTTGATGAGTCTGATGAGATGCTGAGCAGAGGGTTCAAGGGA
TCAATTTATGATGTGTACCGTTATCTTCCACCGGATCTTCAGGTTGTTTT
GATATC
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