FC932010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.433e-58 Identity = 107/183 (58.47%), Postives = 145/183 (79.23%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E + SFD M +K +LLRG+Y YGFE+PSAIQQRA+M +IKG DVIAQAQSGTGKT+ +++V Q +D + ++ QALIL+PTRELA Q +KV++ IGDF+N++ HAC+ G SV +D++ L+ G VV GTPGRV DMI+R+ L+T ++K+ VLDE+DEMLSRGF IYD+++ LP QVVL+ Sbjct: 22 ETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLL 204
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.168e-58 Identity = 108/183 (59.02%), Postives = 143/183 (78.14%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E SFDAM ++ +LLRG+Y YGFE+PSAIQQRA+M +IKG DVIAQAQSGTGKT+ +++ Q VDT+ + QALIL+PTRELA Q +KV++ IGDF++++ HAC+ G +V EDI+ L G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLSRGF IYD++++LP QVVL+ Sbjct: 22 EITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSVECHACIGGTNVREDIKALNDGPQVVVGTPGRVHDMIQRRVLKTDQMKMFVLDEADEMLSRGFTEQIYDIFQFLPQSTQVVLL 204
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.286e-58 Identity = 104/183 (56.83%), Postives = 142/183 (77.60%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E + +FD M +K +LLRGIY YGFE+PSAIQQRA+M I+ GRD IAQAQSGTGKT+ ++++ Q +DT+ ++ QAL+L+PTRELA Q +KV++ +GD++N+ HACV G +V EDI +L G H+V GTPGRV DMI R L+T A+ + LDE+DEMLS GFK SIY++++ LP + QVVL+ Sbjct: 25 EVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGETQVVLL 207
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.213e-57 Identity = 108/183 (59.02%), Postives = 142/183 (77.60%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E SFDAM +K +LLRG+Y YGFE+PSAIQQRA++ IIKG DVIAQAQSGTGKT+ +++ Q +D + + QALIL+PTRELA Q +KV++ IGDF+NI+ HAC+ G +V ED++ L+ G VV GTPGRV DMI+R+ LRT +K+ +LDE+DEMLSRGF IYD+++ LP QVVL+ Sbjct: 22 EITDSFDAMDLKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLL 204
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.584e-57 Identity = 108/183 (59.02%), Postives = 143/183 (78.14%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E SFDAM ++ +LLRG+Y YGFE+PSAIQQRA+M +IKG DVIAQAQSGTGKT+ +++ Q VDT+ + QALIL+PTRELA Q +KV++ IGDF++I+ HAC+ G SV ED++ L+ G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLS GF IYD++++LP QVVL+ Sbjct: 22 EITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIYDIFQFLPQSTQVVLL 204
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.702e-57 Identity = 108/183 (59.02%), Postives = 142/183 (77.60%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E SFD+M +K +LLRGIY YGFE+PSAIQQRA++ IIKG DVIAQAQSGTGKT+ +++ Q +D + + QALIL+PTRELA Q +KV++ IGDF+NI+ HAC+ G +V ED++ L+ G VV GTPGRV DMI+R+ LRT +K+ +LDE+DEMLSRGF IYD+++ LP QVVL+ Sbjct: 22 EITDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLL 204
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.702e-57 Identity = 108/183 (59.02%), Postives = 142/183 (77.60%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E SFD+M +K +LLRGIY YGFE+PSAIQQRA+M IIKG DVIAQAQSGTGKT+ +++ Q +D + + QALIL+PTRELA Q +KV++ IGDF++++ HAC+ G +V ED++ L+ G VV GTPGRV DMI+R+ LRT +KL +LDE+DEMLSRGF IYD+++ LP QVVL+ Sbjct: 22 EITDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSLECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLL 204
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.609e-57 Identity = 106/183 (57.92%), Postives = 142/183 (77.60%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQVVLI 704 E SFDAM +K +LLRG+Y YGFE+PSAIQQRA+M +IKG DVIAQAQSGTGKT+ +++ Q +D++ + QALIL+PTRELA Q +KV++ IGDF+++ HAC+ G SV +D++ L+ G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLSRGF IYD+++ LP QVVL+ Sbjct: 20 ETTDSFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQIQKVVVAIGDFMDVACHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLL 202
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.861e-57 Identity = 107/195 (54.87%), Postives = 148/195 (75.90%), Query Frame = 3 Query: 126 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKGSIYDVYRYLPPDLQVVLI 704 K+ F+T++ ++ +F++M +K DLLRGIY YGFE PS+IQ RA+ II G+DVIAQAQSGTGKT+ + + Q +D+ S+E+QAL+LSPTRELA+Q+E VI +GD++N+ AHAC GK++ +DI+K+ VVSGTPGRV DMIKR+ L R K+LVLDE+DE+L GFK IYD++ LPP +QVV++ Sbjct: 10 KLKFKTSKKLKVSATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADELLGETLGFKQQIYDIFTKLPPTIQVVVV 204
BLAST of FC932010 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.027e-56 Identity = 110/180 (61.11%), Postives = 137/180 (76.11%), Query Frame = 3 Query: 156 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMAIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILVIGDFINIQAHACVEGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKGSIYDVYRYLPPDLQV 695 E SFDAMG++++LLRGIY YGFEKPSAIQQR ++ KG DVI QAQSGTGKT+ V Q +D S E QAL+L+PTRELA Q EKV+ +GD++ ++ HACV G SV ED R L+ GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFK IYD+++ LPP +QV Sbjct: 37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 216 The following BLAST results are available for this feature:
BLAST of FC932010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932010 ID=FC932010; Name=FC932010; organism=Citrus clementina; type=EST; length=706bpback to top |