FC932013

Overview
NameFC932013
Unique NameFC932013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14
Identity = 45/139 (32.37%), Postives = 63/139 (45.32%), Query Frame = 2
Query:  299 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQHNCPLTTHC 715
            P  P LC+  CGFFGS + MN+CSKCY+DI   ++Q   A +++   +N        +     T  V  S           S A+ L       PK   +RC SC K+VG+TGF        C ++  G H  P +  C
Sbjct:   13 PSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLD-----PPKSTATRCLSCNKKVGVTGFKCR-----CGSTFCGTHRYPESHEC 141          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  275 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGF 640
            DET C +   G  +C+  CGFFGS AT NMCS+CY++     D  + AA++   +          E V  A    + + +   +     S +S  +E   AK    P+RC++C+K+VGLTGF
Sbjct:   11 DETACGSGA-GAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDL----------ELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGF 121          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 47/160 (29.38%), Postives = 75/160 (46.88%), Query Frame = 2
Query:  257 GENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPK-------IISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQHNCPLTTHC 715
            G   +   +  Q+    P LC+  CGFFGS + M++CSKCY+ I  ++ Q  +A +++        S   S   +    +  A  VEPK       ++S +PS +S + E+ E       +RC  C K+VG+ GF        C ++  G+H  P T  C
Sbjct:    2 GSEQNDSTSFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAV------EKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPS-SSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCK-----CGSTFCGEHRYPETHDC 149          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 49/135 (36.30%), Postives = 64/135 (47.41%), Query Frame = 2
Query:  314 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQHNCPLTTHCC 718
            LC NNCGFFGS AT+++CSKCY+D   ++  A +  ++  S    T   + S S   A               +  S A+E    V A  K   SRC+SC+KRVGLTGF        C  +  G H  P   H C
Sbjct:   14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPA--------------FLPSSTAAEAGVVVAAVAK--ASRCASCRKRVGLTGF-----ACRCGGTFCGAHRYP-ERHAC 126          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11
Identity = 52/178 (29.21%), Postives = 74/178 (41.57%), Query Frame = 2
Query:  305 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQ--------------------DQAKLAASSIGSIVNETSSGNGSES-----VAAATVDVQASSV----------------EPKIISVQPSCASELSESVEAK----PKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFG-QHNCP 700
            GP+LC   CGF+G+  T  MCS CYK+ + +Q                    D A +  +  G    E ++G+ SE      VAA  V  Q + +                EP +    PS +   S   E K    PK   +RC  C+K+VGLTGF+     + C    +  +HNCP
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADAGLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCP 187          
The following BLAST results are available for this feature:
BLAST of FC932013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SAP1_ARATH1.815e-1432.37Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ6.897e-1434.43Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH7.626e-1329.38Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ7.626e-1336.30Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE1.878e-1129.21AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34203G02EF PostHarveN Citrus clementina cDNA clone C34203G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932013 ID=FC932013; Name=FC932013; organism=Citrus clementina; type=EST; length=742bp
GGAGAACCCGGAAAGGGAATCCAGGACGTCTCTCATCGGTTTTTGCCTGC
TCTCTCCCCGATAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGG
ATGCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTT
CTGTTGCTCGCAGACTGTGGCGTTCATGGTTGGTTGACTTTGCCATGTGG
TATGCATTATGACAAGATAGGAAGCCGTGATTGTAATCTATGGCTATTGT
TTGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCAAGCTCCTCC
TGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTGTGG
CTACTATGAATATGTGTTCCAAATGCTACAAGGACATAATGCTGAAACAG
GATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGAAAC
GTCAAGCGGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATGTGC
AAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGTGCT
TCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAGCCG
GTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCAATGTCGCTG
TGGTAACTATACTGTGTGTCACATCGCTATTCGGACAACATAACTGCCCT
TTGACTACGCACTGCTGCTAGGGATGCTATAATTAAGCAACC
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