FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 44/154 (28.57%), Postives = 72/154 (46.75%), Query Frame = 1
Query:   13 MNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIIT 474
            ++E  ++   RH +L++L   C +     +V E+M  G+L  +L +  G  L                 +L +       HRD+ + NIL+  NY  KVADFGL+RL   +        +    +  P+   Y     KSDV+SFG+++ EI+T
Sbjct:  281 LDEAGVMKKLRHKHLVQLYAICSDREPIYIVTEYMSGGSLLDYLSKGEGVNLQLPTLIDMAAQVASGMAFLEAQ---GYIHRDLAARNILVGENYICKVADFGLARLIEDDEYTAHEGAKFPIKWTAPEAALYNRFTIKSDVWSFGILMAEIVT 431          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: M3KL4_MOUSE (Mitogen-activated protein kinase kinase kinase OS=Mus musculus GN=Mlk4 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 53/175 (30.29%), Postives = 79/175 (45.14%), Query Frame = 1
Query:    4 DQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQR----------ERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILL--------DYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIIT 474
            + V  E +L +  RHPN+++L   C+ +    LV EF   G L + L             R   +P                YLH     PI HRD+KSSNILL          N   K+ DFGL+R     ++ +S A  GT  ++ P+  +       SD++S+GV+L E++T
Sbjct:  152 ESVRREARLFAMLRHPNIIQLRGVCLRQPHLCLVLEFARGGALNRALAAAASDPRAPGPRRARRIPPQVLVNWAVQIARGMLYLHEEAVVPILHRDLKSSNILLLEKIEHDDICNKTLKITDFGLAR-EWHRTTRMSAA--GTYAWMAPEVIRSSLFSKGSDIWSYGVLLWELLT 323          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: M3K7L_DROME (Putative mitogen-activated protein kinase kinase kinase 7-like OS=Drosophila melanogaster GN=Takl1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query:   31 LSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRS--KVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIIT 474
            LS   H N++R++       +  L+ E++  G+L  +L  +                      YLHS ++ PI HRDIK  N+LL YN     K+ DFGL+    T+ S+  T  QGT  Y+ P+  ++     K DVYSFG++L E++T
Sbjct:   58 LSEIDHENVIRVIGRASNGKKDYLLMEYLEEGSLHNYLYGDDKWEYTVEQAVRWALQCAKALAYLHS-LDRPIVHRDIKPQNMLL-YNQHEDLKICDFGLA----TDMSNNKTDMQGTLRYMAPEAIKHLKYTAKCDVYSFGIMLWELMT 201          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTP-GYLDPQYHQYFHLPDKSDVYSFGVVLIEIIT 474
            + + E  ++    H NL+RLL  C  E    ++ EFM +G L ++L+R   S LP                YL +       HRD+ + N L+  +   K+ADFGL+R  M E ++ + A    P  +  P+   +     KSDV++FGV+L EI T
Sbjct:  351 EFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEAR---HFIHRDLAARNCLVSEHNIVKIADFGLARF-MKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIAT 503          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
STK_HYDAT7.787e-1128.57Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]
M3KL4_MOUSE7.787e-1130.29Mitogen-activated protein kinase kinase kinase OS=... [more]
M3K7L_DROME7.787e-1132.67Putative mitogen-activated protein kinase kinase k... [more]
ABL1_CAEEL7.787e-1131.21Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
back to top