FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.546e-34
Identity = 80/180 (44.44%), Postives = 107/180 (59.44%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT------ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRP-HSEVNLA 525
            + + E +LLS   H NL+ LL  C EEGE +LVYE+M +GTL  ++  +    L +               YLH+  NPPI+HRDIK+SNILLD  + +KVADFGLSRL            H+ST  +GTPGYLDP+Y     L DKSDVYS GVVL+E+ T ++ +   +    E+N+A
Sbjct:  665 EFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIA 844          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.546e-34
Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG--LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVV 489
            + + +NE  +LS   H ++++LL CC+E   P+LVYEF+ +G L +H+  E      + W               YLHS+ + PIYHRDIKS+NILLD  YR+KVADFG SR    + +H +T   GT GY+DP+Y+Q     +KSDVYSFGV+L E+IT  K V
Sbjct:  491 LQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPV 655          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.905e-33
Identity = 79/196 (40.31%), Postives = 117/196 (59.69%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            +++   E +LLS  RH +L+ L+  C E GE  LVY++M  GTL +HL   +   L W               YLH+     I HRD+K++NIL+D N+ +KV+DFGLS+ G      H++T  +G+ GYLDP+Y +   L +KSDVYSFGVVL EI+ A   ++ S P  +V+L   A++   +G +++IIDP L
Sbjct:  555 LNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNL 750          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.487e-33
Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG---LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSR 501
            +++ +NE  LLS   H N+++LL CC+    P+LVYE++P+G L + L  +  S    + W               Y+HSA + PIYHRDIK++NILLD  YR+KV+DFG SR      +H++T   GT GY+DP+Y       DKSDVYSFGVVL+E+IT  K +   R
Sbjct:  470 MEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRKR 639          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.542e-33
Identity = 71/159 (44.65%), Postives = 101/159 (63.52%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL-GMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVD 492
            E +LLS   H N+++LL  C ++ E +LVYE++P+G+L   L  + G  L W               YLH   +PPI HRD+KS+NILLD +  +KVADFGLS+L G  E +H++T  +GT GYLDP+Y+    L +KSDVY FGVV++E++T    +D
Sbjct:  678 EIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPID 836          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.542e-33
Identity = 77/172 (44.77%), Postives = 98/172 (56.98%), Query Frame = 1
Query:   28 LLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQR--ERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 534
            +LS   HPNL+ L+  C +  + +LVYEFMP G+L  HL         L W               +LH   NPP+ +RD KSSNILLD  +  K++DFGL++LG T + SH+ST   GT GY  P+Y     L  KSDVYSFGVV +E+IT  K +D   PH E NL A A
Sbjct:  134 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWA 305          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33
Identity = 79/191 (41.36%), Postives = 112/191 (58.64%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H NL+ L+  C E+    L+YE+M +G L  HL  + G   L W               YLHS   P + HRD+KS NILLD ++++K+ADFGLSR   + E SH+ST   GTPGYLDP+Y++ + L +KSDVYSFG+VL+EIIT   V++  + +   ++A      + R  +  I+DP L
Sbjct:  617 EVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLE--QANENRHIAERVRTMLTRSDISTIVDPNL 805          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33
Identity = 79/184 (42.93%), Postives = 109/184 (59.24%), Query Frame = 1
Query:   43 RHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQ---RERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            RH NL+RLL  CIE    +LVYE++  G L Q L    R+ G+ L W               YLH A+ P + HRDIK+SNIL+D  + +K++DFGL++L  +  SHI+T   GT GY+ P+Y     L +KSD+YSFGV+L+E IT    VD+ RP +EVNL       +G    +E++DP L
Sbjct:  235 RHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGN-LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRL 417          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.237e-33
Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E ++LS  RH +L+ L+  C E  E ILVYE+M +G L  HL       L W               YLH+  +  I HRD+K++NILLD N  +KVADFGLS+ G + + +H+STA +G+ GYLDP+Y +   L +KSDVYSFGVVL+E++     ++   P  +VN+A  A+    +G +D+I+D  L
Sbjct:  554 EIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNL 743          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.235e-32
Identity = 77/196 (39.29%), Postives = 116/196 (59.18%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            +++   E +LLS  RH +L+ L+  C E GE  L+Y++M  GTL +HL   +   L W               YLH+     I HRD+K++NILLD N+ +KV+DFGLS+ G      H++T  +G+ GYLDP+Y +   L +KSDVYSFGVVL E++ A   ++ S    +V+L   A++   +G +++IIDP L
Sbjct:  559 LNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNL 754          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
Y1684_ARATH6.546e-3444.44Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH6.546e-3444.85Wall-associated receptor kinase-like 18 OS=Arabido... [more]
ANX1_ARATH1.905e-3340.31Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
WAKLF_ARATH2.487e-3343.53Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
Y5977_ARATH5.542e-3344.65Probable leucine-rich repeat receptor-like protein... [more]
PBS1_ARATH5.542e-3344.77Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y5169_ARATH7.237e-3341.36Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH7.237e-3342.93Probable receptor-like protein kinase At2g42960 OS... [more]
THE1_ARATH7.237e-3341.58Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
ANX2_ARATH1.235e-3239.29Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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