FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31
Identity = 81/191 (42.41%), Postives = 109/191 (57.07%), Query Frame = 1
Query:   16 NEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG--LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDP 579
            NE  LLS+ +H NL+ LL  C E  + ILVY FM +G+L   L  E      L W               YLH+     + HRD+KSSNILLD +  +KVADFG S+    E  S++S   +GT GYLDP+Y++   L +KSDV+SFGVVL+EI++  + ++  RP  E +L   A   I    VDEI+DP
Sbjct:  639 NELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDP 829          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.971e-31
Identity = 78/191 (40.84%), Postives = 113/191 (59.16%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTES-SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H NL+ L+  C E     L+YE+M +G L +H+  +RG   L W               YLH+   PP+ HRD+K++NILL+ +  +K+ADFGLSR    E  +H+ST   GTPGYLDP+Y++   L +KSDVYSFG+VL+EIIT   V++ SR   + ++A      + +G +  I+DP L
Sbjct:  636 EVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSR--EKPHIAEWVGLMLTKGDIQNIMDPKL 824          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.187e-31
Identity = 78/191 (40.84%), Postives = 111/191 (58.12%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E +LL    H NL+ L+  C E     L+YE+MP+G L QHL  + G   L W               YLH+   PP+ HRDIK++NILLD + ++K+ADFGLSR   +    ++ST   GTPGYLDP+Y+Q   L +KSD+YSFG+VL+EII+   ++  SR   + ++       I +G +  I+DP L
Sbjct:  621 EVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSR--EKPHIVEWVSFMITKGDLRSIMDPNL 809          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 6.774e-31
Identity = 75/163 (46.01%), Postives = 103/163 (63.19%), Query Frame = 1
Query:   46 HPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGS---GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNL 522
            HPNL++L+  C+EE   +LVYEFM  G+L  HL R RG+    L W               +LH+A  P + +RD K+SNILLD NY +K++DFGL+R G M ++SH+ST   GT GY  P+Y    HL  KSDVYSFGVVL+E+++  + +D ++P  E NL
Sbjct:  131 HPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFR-RGTFYQPLSWNTRVRMALGAARGLAFLHNAQ-PQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNL 291          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.774e-31
Identity = 80/196 (40.82%), Postives = 107/196 (54.59%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERG--SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSE-VNLAALAIDRIGRGCVDEIIDPYL 585
            + M E + L   +HPNL+ LL  C    E +LVYE+M +G+L   L+ + G    L W               +LH    P I HRDIK+SNILLD ++  KVADFGL+RL     SH+ST   GT GY+ P+Y Q      K DVYSFGV+L+E++T  +        SE  NL   AI +I +G   ++IDP L
Sbjct:  957 EFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLL 1152          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.155e-30
Identity = 71/170 (41.76%), Postives = 98/170 (57.65%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL-----GMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSR 501
            +   E +LLS   H NL+ LL  C ++GE +LVYE+MP+G+L   L       L                 YLH+  +PPI HRDIK SNILLD     KVADFG+S+L     G  +  H++T  +GTPGY+DP+Y+    L +KSDVYS G+V +EI+T ++ +   R
Sbjct:  671 EFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGR 840          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 3.362e-30
Identity = 78/176 (44.32%), Postives = 103/176 (58.52%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGS---GLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 534
            E   L    HPNL++L+  C+E+   +LVYEFMP G+L  HL R RGS    L W               +LH+A    IY RD K+SNILLD  Y +K++DFGL++ G T + SH+ST   GT GY  P+Y    HL  KSDVYS+GVVL+E+++  + VD +RP  E  L   A
Sbjct:  123 EVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFR-RGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIY-RDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWA 296          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.391e-30
Identity = 70/171 (40.94%), Postives = 98/171 (57.31%), Query Frame = 1
Query:   31 LSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLP--WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALA 534
            LS   HPNL++L+  C E  + +LVYE+MP G+L  HL        P  W               YLH  M PP+ +RD+K SNILL  +Y+ K++DFGL+++G + + +H+ST   GT GY  P Y     L  KSD+YSFGVVL+E+IT  K +D ++   + NL   A
Sbjct:  152 LSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWA 322          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 5.735e-30
Identity = 76/195 (38.97%), Postives = 111/195 (56.92%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSR-LGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIG----RGCVDEIIDPYL 585
            E +LL    H +L+ L+  C +     L+YE+M +G L +++  +RG   L W               YLH+   PP+ HRD+K++NILL+    +K+ADFGLSR   +    H+ST   GTPGYLDP+Y++   L +KSDVYSFGVVL+EI+T   V+D +R    +N      D +G    +G +  I+DP L
Sbjct:  627 EVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHIN------DWVGFMLTKGDIKSIVDPKL 815          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.669e-29
Identity = 78/191 (40.84%), Postives = 109/191 (57.07%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGL-PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTE-SSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E  LL    H NL+ L+  C E     LVYEF+P+G L QHL  + G+ +  W               YLH    PP+ HRD+K++NILLD N+++K+ADFGLSR    E  S  ST   GT GYLDP+ +    L +KSDVYSFG+VL+E+IT   V+  ++   + ++      ++ RG + EI+DP L
Sbjct:  608 EVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVI--NQTSGDSHITQWVGFQMNRGDILEIMDPNL 796          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
NORK_MEDTR1.045e-3142.41Nodulation receptor kinase OS=Medicago truncatula ... [more]
RLK6_ARATH3.971e-3140.84Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y2899_ARATH5.187e-3140.84Probable leucine-rich repeat receptor-like protein... [more]
NAK_ARATH6.774e-3146.01Probable serine/threonine-protein kinase NAK OS=Ar... [more]
EXS_ARATH6.774e-3140.82Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5374_ARATH1.155e-3041.76Probable LRR receptor-like serine/threonine-protei... [more]
APK1B_ARATH3.362e-3044.32Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
RLCK7_ARATH4.391e-3040.94Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1518_ARATH5.735e-3038.97Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH1.669e-2940.84Receptor-like protein kinase At5g59670 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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