FC932117

Overview
NameFC932117
Unique NameFC932117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length354
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            H + + NLR  M  TG   A++L TKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  ++ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LG
Sbjct:   43 HGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLG 153          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_SCHPO (Pyruvate kinase OS=Schizosaccharomyces pombe GN=pyk1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.631e-13
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGIL-CAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            S+EYHQ  ++N R A     +   A+ L TKGPEIRTG    G    +  G E+  +TD  Y  K ++ ++ + YK +   +QPG +I   DG +SFTV+E  V    +K R  N+  +
Sbjct:   63 SYEYHQSVIDNARKASATNPLFPLAIALDTKGPEIRTGLTVGGTDYPISSGHEMIFTTDDAYAEKCNDKVMYIDYKNITKVIQPGRIIYVDDGILSFTVIE-KVDDKNLKVRVNNNGKI 180          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.783e-13
Identity = 43/114 (37.72%), Postives = 59/114 (51.75%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCEN 337
            SHEYHQ T+NN+R A    G+   + L TKGPEIRTG  KDG+ +    G  + ++TD  Y   G +    + Y +L   V+PG  I   DG ++  V+       L KC   N
Sbjct:   57 SHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGE-VSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMTLRVVSKEDDRTL-KCHVNN 168          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 8.097e-13
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYH ET+ N+RTA     +  IL    AV L TKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V +    A  +    EN   LG
Sbjct:   80 THEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLLTEVENGGSLG 204          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 8.097e-13
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYH ET+ N+RTA     +  IL    AV L TKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V +    A  +    EN   LG
Sbjct:   80 THEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLVTEVENGGSLG 204          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_EMENI (Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.057e-12
Identity = 45/116 (38.79%), Postives = 62/116 (53.45%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA-MVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENS 340
            S+EYHQ  +++ R A     G   A+ L TKGPEIRTG     K I +K G E+ ISTD  Y    D+  + + YK +   +  G +I   DG +SF VLE  V    ++ RC N+
Sbjct:   70 SYEYHQSVIDHAREAEKQQAGRPVAIALDTKGPEIRTGNTVGDKDIPIKAGHEMNISTDEQYATASDDQNMYVDYKNITKVISAGKLIYVDDGILSFEVLEV-VDDKTLRVRCLNN 184          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.804e-12
Identity = 51/127 (40.16%), Postives = 67/127 (52.76%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYH ET+ N+R A     +  IL    AV L TKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V E    A  +    EN   LG
Sbjct:   80 THEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKG--ADYLVTEVENGGSLG 204          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 71.2478 bits (173), Expect = 1.804e-12
Identity = 51/127 (40.16%), Postives = 67/127 (52.76%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYH ET+ N+R A     +  IL    AV L TKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V E    A  +    EN   LG
Sbjct:   80 THEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKG--ADFLVTEVENGGSLG 204          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.804e-12
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R      G    ++L TKGPEIRT  +KDG  I L++G+E+ +S    ++G      ++Y+ L  DVQ GS IL  DG +   V + +   G VKC   N+  L
Sbjct:   39 SHEEHKARIDTIRKVADRLGKTIGILLDTKGPEIRTHDMKDGL-IMLEKGKEVIVSMS-QVEGTPEKFSVTYEDLINDVQVGSYILLDDGLVELQVKDIDKTKGEVKCDILNTGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_LEIME (Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.804e-12
Identity = 42/111 (37.84%), Postives = 61/111 (54.95%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTV--------LECNV 304
            SHEYHQ T+NN+R A    G+  A+ L TKGPEIRTG    G  + +++G    ++TD  +  KG ++   + Y+ L+  V+PG+ I   DG +   V        LEC V
Sbjct:   57 SHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTV 166          
The following BLAST results are available for this feature:
BLAST of FC932117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
KPYK1_SALTI4.293e-1435.40Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK_SCHPO1.631e-1336.13Pyruvate kinase OS=Schizosaccharomyces pombe GN=py... [more]
KPYK1_TRYBB2.783e-1337.72Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYM_PONAB8.097e-1340.16Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYM_HUMAN8.097e-1340.16Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYK_EMENI1.057e-1238.79Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=... [more]
KPYM_RAT1.804e-1240.16Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYM_MOUSE1.804e-1240.16Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_STAHJ1.804e-1236.21Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYK_LEIME1.804e-1237.84Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC34204G11EF PostHarveN Citrus clementina cDNA clone C34204G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932117 ID=FC932117; Name=FC932117; organism=Citrus clementina; type=EST; length=354bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGTCACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGA
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