FC932117

Overview
NameFC932117
Unique NameFC932117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length354
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.356e-12
Identity = 43/114 (37.72%), Postives = 57/114 (50.00%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCEN 337
            SHEYHQ T+NN+R A    G+   + L TKGPEIRTG  KDG+ +    G  + ++TD  Y   G +    + Y +L   V  G  I   DG ++  VL       L KC   N
Sbjct:   57 SHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGE-VTFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTKAVPVGGSIYVDDGVMTLRVLSKEDDRTL-KCHVNN 168          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.077e-12
Identity = 43/116 (37.07%), Postives = 65/116 (56.03%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            +H  H+  ++++R      G +  ++L TKGPEIRT  + +GK ++L  GQ+I IS    ++G+ ++  +SY KL  DV  GSVIL  DG I   V   +V  GL+     NS  L
Sbjct:   39 NHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGK-LELVTGQKIDISMTQ-VEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQLEVTGKDVARGLIHTLIINSGSL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_AGABI (Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.077e-12
Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNT--GILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVL 292
            +HEYHQ  ++N R  + N   G   A+ L TKGPEIRTG  +DG    +K G E  ++TD  Y+   D  ++ + Y  LA    PG +I   DG IS  +L
Sbjct:   70 THEYHQSVIDNTRQMIKNDPHGRPVAIALDTKGPEIRTGQTRDGNDYPIKAGDEFIVTTDPKYSDICDNKVLFVDYANLASVTAPGKLIYIDDGIISLLIL 170          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAAW (Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAAS (Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAAR (Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAAN (Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAAM (Pyruvate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pyk PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAAC (Pyruvate kinase OS=Staphylococcus aureus (strain COL) GN=pyk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAAB (Pyruvate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pyk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
The following BLAST results are available for this feature:
BLAST of FC932117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
KPYK2_TRYBB2.356e-1237.72Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_BACPY3.077e-1237.07Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK_AGABI3.077e-1239.60Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 ... [more]
KPYK_STAAW4.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAS4.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAR4.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAN4.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAAM4.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAC4.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain C... [more]
KPYK_STAAB4.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain b... [more]

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Properties
Property NameValue
Genbank descriptionC34204G11EF PostHarveN Citrus clementina cDNA clone C34204G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932117 ID=FC932117; Name=FC932117; organism=Citrus clementina; type=EST; length=354bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGTCACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGA
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