FC932117

Overview
NameFC932117
Unique NameFC932117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length354
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.018e-12
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R        + A++L TKGPEIRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 69.707 bits (169), Expect = 5.248e-12
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTV 289
            +HEYH ET+ N+RTA     +  IL    AV L TKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V  GS +   DG IS  V
Sbjct:   80 THEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQV 185          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.248e-12
Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGI------LCAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYH ET+ N+R A  +           AV L TKGPEIRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS +   DG IS  V E    A  +    EN   LG
Sbjct:   80 THEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLISLLVKEKG--ADFLVTEVENGGSLG 204          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.854e-12
Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R           ++L TKGPEIRT  +KDG  I L++G+E+ +S +  ++G      ++Y+ L  DV  GS IL  DG +   V E N   G VKC   N+  L
Sbjct:   39 SHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.854e-12
Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            SHE H+  ++ +R           ++L TKGPEIRT  +KDG  I L++G+E+ +S +  ++G      ++Y+ L  DV  GS IL  DG +   V E N   G VKC   N+  L
Sbjct:   39 SHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_XENLA (Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.527e-11
Identity = 48/127 (37.80%), Postives = 64/127 (50.39%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGIL------CAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTDYTIKG--DENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYH  T+ N+R A  +           AV L TKGPEIRTG +K      ++LK+G  + I+ D   +   DEN++ + YK L   V+PGS I   DG IS  V E  +         EN  MLG
Sbjct:   76 THEYHAGTIKNVREATESLASNPIHYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATMRITLDDAFQENCDENVLWVDYKNLTKVVKPGSKIYVDDGLISLLVKE--IGPDFCVTEIENGGMLG 200          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_DROME (Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.527e-11
Identity = 45/127 (35.43%), Postives = 67/127 (52.76%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILC------AVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITIST--DYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            SHEYH  T+ N+R A+ N           A+ L TKGPEIRTG +       I+LK+G++I ++T  ++  KG   ++ + Y+ +   V+PG+ +   DG IS  V E  V    + C  EN   LG
Sbjct:   83 SHEYHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLISLIVRE--VGKDSLTCEVENGGSLG 207          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK2_CANGA (Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.527e-11
Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA-MVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLE 295
            S+EYHQ  ++N R +  V  G   A+ L TKGPEIRTG   D     +    E+  +TD  Y    D+ ++ + YK +   +QPG VI   DG +SF VLE
Sbjct:   57 SYEYHQSVIDNARKSEQVYPGRPLAIALDTKGPEIRTGTNVDDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVIQPGKVIYVDDGVLSFEVLE 157          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.994e-11
Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 2
Query:    5 HEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            HE H   + N+R A   TG   A++L TKGPEIRT  +++G  I+LK+G ++ IS    + G    I ++Y  L  DV  G+ IL  DG IS  V   + +AG +     N  +L
Sbjct:   41 HEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENG-AIELKEGSKLVISMS-EVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVL 153          
The following BLAST results are available for this feature:
BLAST of FC932117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
KPYK_STAA84.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA34.018e-1237.07Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYM_RABIT5.248e-1242.45Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYM_FELCA5.248e-1237.80Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]
KPYK_STAES6.854e-1236.21Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ6.854e-1236.21Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_XENLA1.527e-1137.80Pyruvate kinase muscle isozyme OS=Xenopus laevis G... [more]
KPYK_DROME1.527e-1135.43Pyruvate kinase OS=Drosophila melanogaster GN=PyK ... [more]
KPYK2_CANGA1.527e-1139.60Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3... [more]
KPYK_BACST1.994e-1137.39Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34204G11EF PostHarveN Citrus clementina cDNA clone C34204G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932117 ID=FC932117; Name=FC932117; organism=Citrus clementina; type=EST; length=354bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGTCACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGA
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