FC932117

Overview
NameFC932117
Unique NameFC932117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length354
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 4.443e-11
Identity = 38/117 (32.48%), Postives = 60/117 (51.28%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HE H   +N +R     TG L  + L TKG EIRT   + GK   +  G EI +S D T  G+++MI ++Y  L  D   G  +L  DG +  T+   + +   + C  +N+ ++G
Sbjct:   39 NHEEHLARMNMVREVEKKTGKLLGIALDTKGAEIRTTDQEGGK-FTINTGDEIRVSMDATKAGNKDMIHVTYPGLFDDTHVGGTVLIDDGAVGLTIKAKDEEKRELVCEAQNTGVIG 154          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_DEBHA (Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.443e-11
Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAM-VNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            S+EYHQ  ++N + +  +  G   A+ L TKGPEIRTG   D K   +    E+  +TD  Y  K D+ ++ + YK +   ++ G +I   DG +SF VL+  V    +K R  NS  +
Sbjct:   60 SYEYHQSVIDNAKQSEEIYKGRPLAIALDTKGPEIRTGTTIDDKDYPILPNHEMIFTTDEAYAKKCDDKVMFIDYKNITKVIEAGKIIYIDDGVVSFEVLQI-VDDKTLKVRSVNSGKI 177          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.443e-11
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 2
Query:    8 EYHQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            E H   + N+R A    G    ++L TKGPEIRT  +++G  I+L+ G+E+ IS D  + G  + I ++Y+ L  DV+ GS IL  DG I   VL+ +     +K +  N+  L
Sbjct:   41 EEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHTMENGG-IELETGKELIISMDEVV-GTTDKISVTYEGLVHDVEQGSTILLDDGLIGLEVLDVDAAKREIKTKVLNNGTL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_NEUCR (Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.803e-11
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA-MVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGD---ENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            S+EYHQ  ++N R A  V+ G   A+ L TKGPEIRTG  K+ + I +  G  + I+TD   K +   E+M  + Y  +   + PG +I   DG ++F VLE  V    +K +  N+  +
Sbjct:   69 SYEYHQSVIDNARQAEKVHPGRPIAIALDTKGPEIRTGNTKNDEDIPISAGTILNITTDEKYKDECTIEHMY-VDYVNITKVIAPGRIIYVDDGVLAFEVLEI-VDDKTIKVKARNNGYI 186          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_YARLI (Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=3 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 7.579e-11
Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVN-TGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLE 295
            S+EYHQ  + N R +     G   A+ L TKGPEIRTG  KD K   +K G  +  ST+  Y  + D+ ++ + Y  +   +  G +I   DG +SF VLE
Sbjct:   67 SYEYHQSVIENARESEQQFQGRPLAIALDTKGPEIRTGVTKDDKDWDVKAGHVMLFSTNPKYKDQCDDKIMYIDYTNIVKQIDIGKIIFVDDGVLSFKVLE 167          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.579e-11
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLVTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAML 349
            H+  ++ +R      G   A++L TKGPEIRT  +KDG  I+L++G E+T+S    ++G      ++Y+ L  DV+ GS IL  DG I   V   +   G V C   N+  L
Sbjct:   43 HKARIDTIRKVSKRLGKTVAILLDTKGPEIRTHNMKDGL-IELEKGSEVTVSMT-EVEGTPEKFSVTYENLINDVEEGSYILLDDGLIELQVKSIDKANGEVLCDVLNTGEL 152          
BLAST of FC932117 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.579e-11
Identity = 46/127 (36.22%), Postives = 64/127 (50.39%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVN------TGILCAVMLVTKGPEIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLG 352
            +HEYH+ T+ N+R A  +      T    A+ L TKGPEIRTG +K      ++LK+G  + ++ D  +    DEN++ + YK L   +  GS I   DG IS  V E       V    EN  MLG
Sbjct:   79 THEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKG--KDFVMTEVENGGMLG 203          
The following BLAST results are available for this feature:
BLAST of FC932117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
KPYK_LACDE4.443e-1132.48Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK_DEBHA4.443e-1134.45Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 P... [more]
KPYK_BACSU4.443e-1135.96Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYK_NEUCR5.803e-1135.83Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3... [more]
KPYK_YARLI7.579e-1137.62Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=... [more]
KPYK_STAS17.579e-1135.71Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK_CHICK7.579e-1136.22Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]

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Properties
Property NameValue
Genbank descriptionC34204G11EF PostHarveN Citrus clementina cDNA clone C34204G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932117 ID=FC932117; Name=FC932117; organism=Citrus clementina; type=EST; length=354bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGTCACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGA
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