FC932122

Overview
NameFC932122
Unique NameFC932122
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD1_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Saccharomyces cerevisiae GN=GND1 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.217e-43
Identity = 87/177 (49.15%), Postives = 121/177 (68.36%), Query Frame = 3
Query:   36 GLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDGPCVTYIGEGGSGNF 566
            GL GLAVMGQNL LN A+ GF +  YNRT SKVD  L  A+      + G  +  DF+  ++RPR V++LVKAG+PVD  I  +   +  GD IIDGGN  + ++ RR  E  ++G+L++G GVSGGEEGAR+GPSLMPGGS EA+ +I++I Q ++A+ D  PC  ++G  G+G++
Sbjct:    6 GLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFL--ANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHY 180          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_SCHPO (6-phosphogluconate dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe GN=SPBC660.16 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 7.193e-43
Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 3
Query:    9 MEAPALSRIGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQV-DDGPCVTYIGEGGSGNF 566
            M    ++  GL GLAVMGQNL LN A+KGF +  YNRTTS+VDE L  A+      + G ++  +FV  +++PR  I+LVKAG PVD  I  L+  +  GD I+DGGN  Y +T RR  E +++G+L++G GVSGGEEGAR+GPSLMPGG+  A+  I+ I Q +AA+  ++ PC  ++GE G+G++
Sbjct:    1 MSQKEVADFGLIGLAVMGQNLILNGADKGFTVCCYNRTTSRVDEFL--ANEAKGKSIVGAHSLEEFVSKLKKPRVCILLVKAGKPVDYLIEGLAPLLEKGDIIVDGGNSHYPDTTRRCEELAKKGILFVGSGVSGGEEGARYGPSLMPGGNPAAWPRIKPIFQTLAAKAGNNEPCCDWVGEQGAGHY 185          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_HAEDU (6-phosphogluconate dehydrogenase, decarboxylating OS=Haemophilus ducreyi GN=gnd PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.193e-43
Identity = 87/179 (48.60%), Postives = 122/179 (68.16%), Query Frame = 3
Query:   33 IGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVD-DGPCVTYIGEGGSGNF 566
            IG+ GLAVMGQNL LN+ + GF +  YNRT SKVDE L  A       + G Y+  D    +++PR ++++V+AG  VDQ I AL  H+  GD IIDGGN  Y +T RR    +++G+ ++G GVSGGEEGARHGPS+MPGG+ EA+  ++ ILQ ++A+ D D PC  ++G+ G+G+F
Sbjct:    7 IGVIGLAVMGQNLILNMNDNGFKVVAYNRTASKVDEFL--AGEAKDTNIIGAYSLEDLAAKLEKPRKIMLMVRAGEVVDQFIDALLPHLEAGDIIIDGGNSNYPDTNRRTITLAEKGIRFIGTGVSGGEEGARHGPSIMPGGNEEAWPFVKPILQAISAKTDKDEPCCDWVGKEGAGHF 183          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD9_ECOLX (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli GN=gnd PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.395e-43
Identity = 86/180 (47.78%), Postives = 126/180 (70.00%), Query Frame = 3
Query:   30 RIGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDG-PCVTYIGEGGSGNF 566
            +IG+ G+AVMG+NLALN+  +G+ +SV+NR+  K +E +  A   G+  L  +YT ++FV S++ PR ++++VKAGS  D  I +L  ++  GD IIDGGN ++ +T RR  E S +G  ++G GVSGGEEGA  GPS+MPGG  EAY  +  IL+++AA  +DG PCVTYIG  G+G++
Sbjct:    5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVI--AENPGK-KLVPYYTVQEFVESLETPRRILLMVKAGSGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGADGAGHY 181          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_DROME (6-phosphogluconate dehydrogenase, decarboxylating OS=Drosophila melanogaster GN=Pgd PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.227e-42
Identity = 92/178 (51.69%), Postives = 117/178 (65.73%), Query Frame = 3
Query:   33 IGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDGPCVTYIGEGGSGNF 566
            I L GLAVMGQNL LN+ EKGF +  YNRT +KV E L  A+      + G  +  D V  ++ PR V++LVKAGS VD  I  L   +S GD IIDGGN  Y +T RR  E ++ GLL++G GVSGGEEGARHGPSLMPGG   A+  I+ I Q + A+ D  PC  ++G+GG+G+F
Sbjct:    7 IALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFL--ANEAKDTKVIGADSLEDMVSKLKSPRKVMLLVKAGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLFVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHF 182          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIFL (6-phosphogluconate dehydrogenase, decarboxylating OS=Shigella flexneri GN=gnd PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.603e-42
Identity = 85/180 (47.22%), Postives = 125/180 (69.44%), Query Frame = 3
Query:   30 RIGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDG-PCVTYIGEGGSGNF 566
            +IG+ G+AVMG+NLALN+  +G+ +S++NR+  K +E +  A   G+  L  +YT ++FV S++ PR ++++VKAG+  D  I +L  ++  GD IIDGGN ++ +T RR  E S +G  ++G GVSGGEEGA  GPS+MPGG  EAY  +  IL K+AA  +DG PCVTYIG  G+G++
Sbjct:    5 QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVI--AENPGK-KLAPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHY 181          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_ECOLI (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli (strain K12) GN=gnd PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.603e-42
Identity = 85/180 (47.22%), Postives = 125/180 (69.44%), Query Frame = 3
Query:   30 RIGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDG-PCVTYIGEGGSGNF 566
            +IG+ G+AVMG+NLALN+  +G+ +S++NR+  K +E +  A   G+  L  +YT ++FV S++ PR ++++VKAG+  D  I +L  ++  GD IIDGGN ++ +T RR  E S +G  ++G GVSGGEEGA  GPS+MPGG  EAY  +  IL K+AA  +DG PCVTYIG  G+G++
Sbjct:    5 QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVI--AENPGK-KLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHY 181          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_DROSI (6-phosphogluconate dehydrogenase, decarboxylating OS=Drosophila simulans GN=Pgd PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.603e-42
Identity = 92/178 (51.69%), Postives = 117/178 (65.73%), Query Frame = 3
Query:   33 IGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDGPCVTYIGEGGSGNF 566
            I L GLAVMGQNL LN+ EKGF +  YNRT +KV E L  A+      + G  + +D V  ++ PR V++LVK GS VD  I  L   +S GD IIDGGN  Y +T RR  E ++ GLLY+G GVSGGEEGARHGPSLMPGG   A+  I+ I Q + A+ D  PC  ++G+GG+G+F
Sbjct:    7 IALIGLAVMGQNLILNMDEKGFVVCAYNRTVAKVKEFL--ANEAKGTNVIGADSLKDMVSKLKSPRKVMLLVKGGSAVDDFIQQLVPLLSAGDVIIDGGNSEYQDTSRRCDELAKLGLLYVGSGVSGGEEGARHGPSLMPGGHEAAWPLIQPIFQAICAKADGEPCCEWVGDGGAGHF 182          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_CERCA (6-phosphogluconate dehydrogenase, decarboxylating OS=Ceratitis capitata GN=Pgd PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.603e-42
Identity = 91/182 (50.00%), Postives = 119/182 (65.38%), Query Frame = 3
Query:   21 ALSRIGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDGPCVTYIGEGGSGNF 566
            A + I L GLAVMGQNL LN+ +KGF +  YNRT  KV++ L    +   +   G  + +D V  ++ PR +++LVKAGS VD  I  L   +SPGD IIDGGN  Y +T RR  E   + +LY+G GVSGGEEGARHGPSLMPGG  EA+  I+ I Q + A+ D  PC  ++GEGG+G+F
Sbjct:    3 AKADIALIGLAVMGQNLVLNMNDKGFVVCAYNRTVEKVNQFLKNEAKGTNV--IGATSLQDMVNKLKLPRKIMLLVKAGSAVDDFIQQLVPLLSPGDVIIDGGNSEYQDTARRCDELRAKKILYVGSGVSGGEEGARHGPSLMPGGHPEAWPLIQPIFQSICAKADKEPCCEWVGEGGAGHF 182          
BLAST of FC932122 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPN (6-phosphogluconate dehydrogenase, decarboxylating OS=Klebsiella pneumoniae GN=gnd PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.093e-42
Identity = 85/180 (47.22%), Postives = 126/180 (70.00%), Query Frame = 3
Query:   30 RIGLAGLAVMGQNLALNVAEKGFPISVYNRTTSKVDETLDRAHREGQLPLTGHYTPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEHMSPGDCIIDGGNEWYLNTERRIHEASQQGLLYLGMGVSGGEEGARHGPSLMPGGSFEAYNNIRDILQKVAAQVDDG-PCVTYIGEGGSGNF 566
            +IG+ G+AVMG+NLALN+  +G+ +SV+NR+  K +E +  A   G+  L  +YT ++FV S++ PR ++++VKAG+  D  I +L  ++  GD IIDGGN ++ +T RR  E S +G  ++G GVSGGEEGA  GPS+MPGG  EAY  +  IL+++AA  +DG PCVTYIG  G+G++
Sbjct:    5 QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVI--AENTGK-KLVPYYTVQEFVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGADGAGHY 181          
The following BLAST results are available for this feature:
BLAST of FC932122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
6PGD1_YEAST4.217e-4349.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SCHPO7.193e-4348.136-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_HAEDU7.193e-4348.606-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD9_ECOLX9.395e-4347.786-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_DROME1.227e-4251.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIFL1.603e-4247.226-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_ECOLI1.603e-4247.226-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_DROSI1.603e-4251.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CERCA1.603e-4250.006-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLEPN2.093e-4247.226-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionC34204H05EF PostHarveN Citrus clementina cDNA clone C34204H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932122 ID=FC932122; Name=FC932122; organism=Citrus clementina; type=EST; length=568bp
CAGTTTCAATGGAAGCCCCTGCTCTCTCACGCATCGGTCTTGCTGGCCTA
GCCGTCATGGGCCAGAACCTGGCCCTAAACGTCGCTGAAAAAGGCTTCCC
AATCTCCGTCTACAACCGCACTACTTCCAAAGTCGACGAAACCCTAGATC
GGGCCCACCGCGAGGGTCAACTCCCTTTGACCGGCCACTACACTCCCAGG
GACTTCGTCCTCTCCATCCAACGCCCCAGATCCGTCATCATCTTAGTCAA
AGCCGGCTCCCCCGTTGACCAGACCATCGCCGCCCTCTCGGAGCACATGT
CCCCCGGCGACTGCATCATCGACGGCGGCAACGAGTGGTACCTCAACACC
GAGCGCCGTATCCATGAAGCCAGCCAGCAGGGTTTGCTTTATCTCGGCAT
GGGGGTCTCCGGCGGCGAGGAAGGCGCGCGTCATGGTCCCTCTTTGATGC
CCGGTGGCTCCTTCGAGGCTTATAATAATATTCGAGATATTTTGCAAAAA
GTTGCCGCCCAAGTTGATGATGGCCCTTGTGTTACTTACATTGGTGAAGG
CGGGTCTGGTAATTTCGT
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