FC932125

Overview
NameFC932125
Unique NameFC932125
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: YI26_SCHPO (Uncharacterized amino-acid permease P7G5.06 OS=Schizosaccharomyces pombe GN=SPAP7G5.06 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.076e-28
Identity = 68/214 (31.78%), Postives = 117/214 (54.67%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFL 643
            A+E+ DP +++P+A ++V +RIA FY++  +LIG++V P    L+  S + ++SPFV+AI  A+I  LPS+ NA I+I+  S  NS  +  SR + AM      P+ F   ++ G P +A+                  +   F WLL +S ++   +W ++ +C+I F  A+KKQ  S +   + +P   + + +G +   I+ L+A F V L
Sbjct:  294 AAEAEDPQKSLPRATKQVFWRIAIFYVVSLILIGLLVSPDDPRLMGNSSDGSTSPFVLAIKEANIRGLPSVFNAVIIISTVSVANSCTFTASRTLHAMAAKGDAPRFFAYTDRLGRPLLAMAVCLLFGFFAYINAAGDVSDTVFDWLLAISGISNFFSWGSINLCHIVFRLAMKKQGRSLDQLGFVSPMGIWGSAIG-LAFNILCLMAEFYVSL 506          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: YHE1_SCHPO (Uncharacterized amino-acid permease PB2B2.01 OS=Schizosaccharomyces pombe GN=SPBPB2B2.01 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.757e-27
Identity = 69/199 (34.67%), Postives = 114/199 (57.29%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFI 598
            A+E+ +P +A P A R+  +RIA FYIL   ++ +++      L S  G  ++SPFV+AI +A+I ALPSI+NA ILI+  S+ N+  + GSR I ++  +   P+ F  V++ G P VA++  +                  F W+L++S +  L  W ++C+ +IR+ AA+K QN S +   + +PF  YA++  FI
Sbjct:  293 AAETENPAKAFPVAVRQTLFRIAIFYILSLFIVSLLISGADPRLTSYHG-VDASPFVLAIKDANIKALPSILNAIILISVISSANAQLYAGSRAIHSLGCNGFAPKCFTLVDREGRPLVALLILFLFMFLGYLVETGQYDT-VFDWMLSISGLGTLFCWGSICLAHIRYRAAMKHQNRSLKEVGFVSPFNVYASYYAFI 489          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: MEU22_SCHPO (Probable amino-acid permease meu22 OS=Schizosaccharomyces pombe GN=meu22 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.757e-27
Identity = 72/213 (33.80%), Postives = 113/213 (53.05%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGL-VSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPV 637
            ASE+ +P + +P A +++ +RI  FYI+   ++ ++V     GL  S + N   SPFVIAI  A+I ALPSI+N  IL++  S GNS  +  SR + A+  +   P+IF + NK G P  A+                   A  F WLL++  ++    W ++C+ +I+F  A K QN   E  P+++ F  Y +  G +  TI+ L+A F V
Sbjct:  274 ASEAKNPQKTVPAAVKQIFWRIFLFYIVALFMLTLVVPSDLPGLRTSDNSNVLISPFVIAIQLANIRALPSIMNVVILLSTLSVGNSASYAASRALFALAKNGYAPKIFNKTNKRGHPIYAIAVTLLFGSIAYFTEAGVGGA-LFGWLLSICGLSTTFIWGSICLAHIQFRRAWKIQNRKLEDLPYRSIFGVYGSIYG-VAMTILALIAQFYV 484          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: YCUB_SCHPO (Uncharacterized amino-acid permease C965.11c OS=Schizosaccharomyces pombe GN=SPCC965.11c PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27
Identity = 78/227 (34.36%), Postives = 117/227 (51.54%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A+ES +P +AIP A R+  +RI + Y   ++  G+ V      L SGS    S P  IAI NA  N     VNA ILI   S+ NS  ++GSR +  +  D   P+IF RV+K GVP+VAV +                A +A+ +++NL+ V+  I W  +   + RF     KQ  +    P+K+P  P+   +GF+   I+TLV G+ VF    ++  +FV +Y
Sbjct:  249 AAESKNPKKAIPLAVRQTFWRILYVYFGISISYGITVAWNDPNLSSGSKTLKS-PMTIAIMNAGWNHAGDFVNAVILITCLSSINSGIYIGSRSLYNLAKDGMAPKIFKRVDKRGVPWVAVHSV-HLFGFLSIMNYSTGAVKAYGYIINLAGVSAFIVWTAIIFVHFRFRRGWVKQGYALSDLPFKSPLYPFPQLIGFVIGIILTLVQGWTVFKP--FAAGDFVDAY 471          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: YH81_SCHPO (Uncharacterized amino-acid permease C359.01 OS=Schizosaccharomyces pombe GN=SPBC359.01 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26
Identity = 73/228 (32.02%), Postives = 122/228 (53.51%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVA----AWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPV--FLKGNWSTSN 667
            A+E  +P +++P A ++V +RIA FY++  +LIG++V P    L+ G+G+ + SPFV+AI  A+I  LPS+ NA I+I+  S  NS  +  +R +  M T  Q P+ F   ++ G P +A+V      +              +   F WLL +S ++    W ++C+ +I F  A KKQ  S +   + +P   + + +G +G  I+ L+A F V  FL G    +N
Sbjct:  287 AAEVGNPRKSVPSAVKQVFWRIAIFYVVSLILIGLLVSPDDPRLM-GNGDVSVSPFVLAIQEANIKGLPSVFNAVIIISVVSVTNSTTYTAARTLQGMATLKQAPKFFSYTDRVGRPLIAMVVVLLFGFFAYINEADKNGSDISDTVFDWLLAISGLSSFFTWGSICLSHIMFRLAFKKQGHSLKELGFVSPMGIWGSVIG-LGFNILCLMAEFYVSLFLIGGSPNAN 512          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: YCV4_SCHPO (Uncharacterized amino-acid permease C777.04 OS=Schizosaccharomyces pombe GN=SPCC777.04 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.314e-26
Identity = 69/228 (30.26%), Postives = 121/228 (53.07%), Query Frame = 2
Query:    8 ESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGS---GNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            E+ +P + I K++ +  +RIA FY++G  ++G+ V P  + ++S +   GNA +SPFV+AI  A I  +P ++NAC+L+   S+ NS  ++GSR + A+  +   P+I     K G+P+V  +                 +A  F +  +  TV G I W  + + YI ++ A   Q +  E  P+++  QPY A+   I + +IT   G+  F+ G +   +F+ SY
Sbjct:  266 EAPNPEKTIRKSSFQSLFRIATFYVIGVFVLGLCV-PYDSDILSSNASKGNAAASPFVVAIKLAQIKVMPDVINACLLVFIISSANSDIYIGSRTLYALAKEGYAPKILMLQTKQGIPWVGCLVT-SSFGLLAFMNTKSSSATIFGYFSSAVTVFGTINWINILLSYICYHRATIVQQIPTERIPFRSWGQPYIAYASLIFTGLITFFNGYNAFIHG-FKYRSFITSY 490          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: YI0B_SCHPO (Uncharacterized amino-acid permease C869.11 OS=Schizosaccharomyces pombe GN=SPAC869.11 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25
Identity = 69/218 (31.65%), Postives = 114/218 (52.29%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVA----AWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFL 643
            A+E  +P +A+P A ++V +RIA FY++  +LIG+++ P    L+ G+G+ + SPFV+AI  A+I  LPS+ NA I+I+  S  NS  +   R +  M    Q P  F   ++ G P +A++      +              +   F WLL LS ++    W ++C+C+I F  A KKQ  S +   + +P   + + +G     I+ L+A F V L
Sbjct:  287 AAEVDNPQKALPHAVKQVFWRIAIFYVVSLILIGLLISPDDPNLM-GNGSTSVSPFVLAIKEANIKGLPSVFNAVIIISVVSVTNSSTYTAGRTLHGMANLKQAPSFFKYTDRLGRPLLAMIVVLLFGFFAYINEADKNGNDVSDTVFNWLLALSGLSNFFTWGSICLCHIIFRLAFKKQGHSLKELGFVSPMGIWGSCIGLF-FNILCLMAQFYVSL 502          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: YH83_SCHPO (Uncharacterized amino-acid permease C359.03c OS=Schizosaccharomyces pombe GN=SPBC359.03c PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25
Identity = 72/234 (30.77%), Postives = 122/234 (52.14%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVA----AWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFL---KGNWSTSNFVASY 682
            A+E  DP + +P A ++V +R+A FYI+  +LIG+++ P    L+ G+G+A+ SPFV+AI  A+I  LPS+ NA I+I+  S  NS  +   R +  M    Q P  F   ++ G P +A++      +              +   F WLL +S ++    W ++C+ +I F  A KKQ  S +   + +P   + + +G +G  I+ L+A F V L    G+ + ++F   Y
Sbjct:  287 AAEVGDPRKTLPGAVKQVFWRVAIFYIVSLILIGLLISPDDPKLM-GNGSASVSPFVLAIQEANIKGLPSVFNAVIIISVISVTNSSTYTAGRTLHGMANLKQAPAFFKYTDRLGRPLIAMIVVLSFGFFAYINEANNNGNDISDTVFDWLLAISGLSNFFTWGSICLSHIMFRLAFKKQGHSLKELGFVSPMGIWGSVIG-LGFNILCLMAEFYVSLFPIGGSPNANDFFQGY 518          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: HIP1_YEAST (Histidine permease OS=Saccharomyces cerevisiae GN=HIP1 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25
Identity = 77/212 (36.32%), Postives = 108/212 (50.94%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGN--ANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGF 631
            A+ES +P   IPKAA+R  + I   Y+    LIG +V      L++GS +  A SSP VIAI N  I  LPS++NA ILIA  S  NS  +  SR +VAM     LP+   RV+K G P  A++                  A+ FTWL  LS ++ +  W  + + +IRF  A+K Q  S +  P+ +      +W GFI    + L+A F
Sbjct:  305 AAESKNPRETIPKAAKRTFWLITASYVTILTLIGCLVPSNDPRLLNGSSSVDAASSPLVIAIENGGIKGLPSLMNAIILIAVVSVANSAVYACSRCMVAMAHIGNLPKFLNRVDKRGRPMNAILLT-LFFGLLSFVAASDKQAEVFTWLSALSGLSTIFCWMAINLSHIRFRQAMKVQERSLDELPFISQTGVKGSWYGFI-VLFLVLIASF 514          
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: LYSP_ECOLI (Lysine-specific permease OS=Escherichia coli (strain K12) GN=lysP PE=1 SV=5)

HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24
Identity = 69/228 (30.26%), Postives = 108/228 (47.37%), Query Frame = 2
Query:    2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGS-GNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGFPVFLKGNWSTSNFVASY 682
            A ES DP + IP+A R+V +RI  FY+   L+I +I+      L+     + + SPF +   +A + +  +++NA IL A  SAGNS  +  +RM+  +  D + P+IF ++++ GVP  A+ A                    + WLLN S + G IAW  + + + RF      Q       P+++ F P      FI   IITL   +  FLK         A+Y
Sbjct:  228 AGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQT-VYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGVAATY 454          
The following BLAST results are available for this feature:
BLAST of FC932125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
YI26_SCHPO2.076e-2831.78Uncharacterized amino-acid permease P7G5.06 OS=Sch... [more]
YHE1_SCHPO1.757e-2734.67Uncharacterized amino-acid permease PB2B2.01 OS=Sc... [more]
MEU22_SCHPO1.757e-2733.80Probable amino-acid permease meu22 OS=Schizosaccha... [more]
YCUB_SCHPO3.915e-2734.36Uncharacterized amino-acid permease C965.11c OS=Sc... [more]
YH81_SCHPO1.488e-2632.02Uncharacterized amino-acid permease C359.01 OS=Sch... [more]
YCV4_SCHPO3.314e-2630.26Uncharacterized amino-acid permease C777.04 OS=Sch... [more]
YI0B_SCHPO1.259e-2531.65Uncharacterized amino-acid permease C869.11 OS=Sch... [more]
YH83_SCHPO1.259e-2530.77Uncharacterized amino-acid permease C359.03c OS=Sc... [more]
HIP1_YEAST2.148e-2536.32Histidine permease OS=Saccharomyces cerevisiae GN=... [more]
LYSP_ECOLI4.051e-2430.26Lysine-specific permease OS=Escherichia coli (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34204H08EF PostHarveN Citrus clementina cDNA clone C34204H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932125 ID=FC932125; Name=FC932125; organism=Citrus clementina; type=EST; length=718bp
CGCATCTGAGTCGGTTGATCCTCATCGTGCTATTCCCAAAGCCGCCCGTC
GTGTGACTTACCGCATTGCCTTCTTCTACATTCTCGGAGCACTTCTCATC
GGCATGATCGTGGACCCAAGAGCCACAGGCCTGGTCTCCGGCTCTGGCAA
CGCGAACAGCTCGCCCTTTGTGATTGCCATCACCAACGCCAGCATCAACG
CTCTGCCCTCGATCGTGAATGCATGCATTCTCATTGCCGCGTGGTCTGCC
GGTAACTCATACTGCTGGGTCGGATCACGCATGATTGTCGCCATGACTAC
AGACCACCAGCTGCCCCAGATCTTCGGCCGCGTAAACAAGCACGGTGTGC
CATATGTGGCTGTCGTCGCCGCCTGGCTCTTTGGGCCGCTGCCGTACCTG
AGTCTCGGTAGCGGTGGCGCAGCGCAGGCATTCACCTGGCTTCTGAACCT
CAGCACGGTTGCCGGTCTGATCGCTTGGGCAACCCTTTGCGTCTGCTACA
TTCGTTTCTATGCCGCATTGAAGAAGCAAAATGTGAGCCGAGAAACTTTC
CCATGGAAAGCACCCTTTCAACCTTATGCCGCATGGGTAGGCTTTATCGG
CTCTACTATCATTACTTTGGTTGCTGGTTTCCCCGTGTTTTTGAAGGGCA
ACTGGAGTACGTCCAACTTCGTTGCATCGTACATCGGTATCCCCATCTTC
ATCGNTCCCATCATTTGC
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