FC932125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: PROY_SALTY (Proline-specific permease proY OS=Salmonella typhimurium GN=proY PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 55/210 (26.19%), Postives = 88/210 (41.90%), Query Frame = 2 Query: 2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPYAAWVGFIGSTIITLVAGF 631 A E+ DP ++IP+A V RI FY+ G L + M + P N SPFV+ + I SI+N +L A+ SA NS + RM+ M P++F + ++ G+P+V V+ F + +L+T A + W + + I F L + V + +K P G I I + G+ Sbjct: 222 AGEAKDPEKSIPRAINSVPMRILVFYV-GTLFVIMSIYPW------NQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTSRRGIPWVTVL-VMTIALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEV--KALKFKVPGGVVTTIAGLIFLVFIIALIGY 421
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: AROP_SALTY (Aromatic amino acid transport protein aroP OS=Salmonella typhimurium GN=aroP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 56/193 (29.02%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 2 ASESVDPHRAIPKAARRVTYRIAFFYILG-ALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPY 577 A+E+ +P ++IPKA +V YRI FYI A+L+ ++ R T A++SPFV+ + + +N +L AA S NS + SRM+ + P+ V+K GVP +++ + AF L+ L A +I WA + + ++ F A ++Q V + FP A F P+ Sbjct: 224 AAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLLPWTRVT--------ADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALLNVDKRGVPVSSILVS-AVVTALCVLLNYLAPESAFGLLMALVVSALVINWAMISLAHMMFRRAKQQQGV-KTRFP--ALFYPF 404
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: AROP_SALTI (Aromatic amino acid transport protein aroP OS=Salmonella typhi GN=aroP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 56/193 (29.02%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 2 ASESVDPHRAIPKAARRVTYRIAFFYILG-ALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETFPWKAPFQPY 577 A+E+ +P ++IPKA +V YRI FYI A+L+ ++ R T A++SPFV+ + + +N +L AA S NS + SRM+ + P+ V+K GVP +++ + AF L+ L A +I WA + + ++ F A ++Q V + FP A F P+ Sbjct: 224 AAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLLPWTRVT--------ADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALLNVDKRGVPVSSILVS-AVVTALCVLLNYLAPESAFGLLMALVVSALVINWAMISLAHMMFRRAKQQQGV-KTRFP--ALFYPF 404
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: PROY_ECOLI (Proline-specific permease proY OS=Escherichia coli (strain K12) GN=proY PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 51/183 (27.87%), Postives = 80/183 (43.72%), Query Frame = 2 Query: 2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETF 550 A E+ DP ++IP+A V RI FY+ G L + M + P +GS PFV+ + I SI+N +L A+ SA NS + RM+ M P+IF + ++ G+P+V V+ F + +L+T A + W + + I F L + V F Sbjct: 222 AGEAKDPEKSIPRAINSVPMRILVFYV-GTLFVIMSIYPWNQVGTAGS------PFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVL-VMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKF 396
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: PROY_ECOL6 (Proline-specific permease proY OS=Escherichia coli O6 GN=proY PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 51/183 (27.87%), Postives = 80/183 (43.72%), Query Frame = 2 Query: 2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETF 550 A E+ DP ++IP+A V RI FY+ G L + M + P +GS PFV+ + I SI+N +L A+ SA NS + RM+ M P+IF + ++ G+P+V V+ F + +L+T A + W + + I F L + V F Sbjct: 222 AGEAKDPEKSIPRAINSVPMRILVFYV-GTLFVIMSIYPWNQVGTAGS------PFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVL-VMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKF 396
BLAST of FC932125 vs. ExPASy Swiss-Prot
Match: PROY_ECO57 (Proline-specific permease proY OS=Escherichia coli O157:H7 GN=proY PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 51/183 (27.87%), Postives = 80/183 (43.72%), Query Frame = 2 Query: 2 ASESVDPHRAIPKAARRVTYRIAFFYILGALLIGMIVDPRATGLVSGSGNANSSPFVIAITNASINALPSIVNACILIAAWSAGNSYCWVGSRMIVAMTTDHQLPQIFGRVNKHGVPYVAVVAAWXXXXXXXXXXXXXXAAQAFTWLLNLSTVAGLIAWATLCVCYIRFYAALKKQNVSRETF 550 A E+ DP ++IP+A V RI FY+ G L + M + P +GS PFV+ + I SI+N +L A+ SA NS + RM+ M P+IF + ++ G+P+V V+ F + +L+T A + W + + I F L + V F Sbjct: 222 AGEAKDPEKSIPRAINSVPMRILVFYV-GTLFVIMSIYPWNQVGTAGS------PFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVL-VMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKF 396 The following BLAST results are available for this feature:
BLAST of FC932125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932125 ID=FC932125; Name=FC932125; organism=Citrus clementina; type=EST; length=718bpback to top |