FC932130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP58_CRYNE (Nucleolar protein 58 OS=Cryptococcus neoformans GN=NOP58 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14 Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 3 Query: 12 LLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 461 LLP + + A + G + + + CD+ +++ +RM IAPNL+A+VG V A+L+ AG L LAK PA VQ+LGA+K T + G + + P L+ + R++A K+ L+ RVD+ Sbjct: 236 LLPEDLEATLKSAAELSMGTEISDSDMTHIHSLCDQVISISEYRTQLSEYLRNRMQAIAPNLTALVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAPQKLKGKMARMVATKAALSIRVDA 385
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP58_SCHPO (Nucleolar protein 58 OS=Schizosaccharomyces pombe GN=nop58 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14 Identity = 49/173 (28.32%), Postives = 80/173 (46.24%), Query Frame = 3 Query: 12 LLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVD--STRGDPSGTAGRSFREEIHKKI 524 +LP I + A + G + E+ L + D+ +++ +RM IAPNL+A+VG V A+L+ AG L LAK PA +Q+LGA+K T S + G + + + + R+LA K+ L+ RVD S + +G G R + ++ Sbjct: 226 ILPEEIEATLKSAAEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNLTALVGELVGARLIAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLIYHASLVGQANSKNKGKIARVLATKAALSLRVDALSDKDTTNGNIGLENRIRVENRL 398
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: PRP31_YEAST (Pre-mRNA-processing factor 31 OS=Saccharomyces cerevisiae GN=PRP31 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 49/174 (28.16%), Postives = 87/174 (50.00%), Query Frame = 3 Query: 27 IIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFR-VGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS--TRGDPSGTAGRSFREEIHKKIEKWQE 539 +++ +S+ S + +PL + ++A ++ S++S IAPN+ +VG +AA+L+ AGG+ +++P+CN+ +G K T S R GYL +++ Q P + + R+L AK +LAARVD+ GD + ++ E+ KK K E Sbjct: 173 LVLTMSMKTSFKNKEPLDIKTRTQILEANSILENLWKLQEDIGQYIASKISIIAPNVCFLVGPEIAAQLIAHAGGVLEFSRIPSCNIASIGKNKHLSHELHTLESGVRQEGYLFASDMIQKFPVSVHKQMLRMLCAKVSLAARVDAGQKNGDRNTVLAHKWKAELSKKARKLSE 346
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP58_LODEL (Nucleolar protein 58 OS=Lodderomyces elongisporus GN=NOP58 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 51/178 (28.65%), Postives = 81/178 (45.51%), Query Frame = 3 Query: 3 LEGLLPSAIIMVVSVTASTTSGKPLPEDALQKTIDACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVD--STRGDPSGTAGRSFREEIHKKIEK 530 L +LP I V A + G + E+ L+ ++ +++ SRM IAPNL+A+VG V A+ + AG L++LAK PA +Q+LGA+K T + G + + + R R LAAK+ L+ R D D S + G R ++ ++ K Sbjct: 223 LSEILPEEIEEQVKTAAEVSMGTEITENDLENIKALAEQIVDFAAYREQLSNYLSSRMKAIAPNLTAMVGDLVGARFIAHAGSLTSLAKAPASTIQILGAEKALFRALKTKHDTPKYGIIYHASLVGQASGKNKGRIARTLAAKAALSVRYDCFDEERDDSDSFGLDNRGKVESRLSK 400
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP56_PONAB (Nucleolar protein 56 OS=Pongo abelii GN=NOP56 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 159 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 536 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP56_MOUSE (Nucleolar protein 56 OS=Mus musculus GN=Nop56 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 159 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 536 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP56_MACFA (Nucleolar protein 56 OS=Macaca fascicularis GN=NOP56 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 159 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 536 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP56_HUMAN (Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 159 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 536 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP56_BOVIN (Nucleolar protein 56 OS=Bos taurus GN=NOP56 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 159 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 536 ++ S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T + + G + + + R R LA K ++A+R+D P+ G RE++ +++ ++ Sbjct: 284 YLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYE 409
BLAST of FC932130 vs. ExPASy Swiss-Prot
Match: NOP5B_ARATH (Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13 Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 3 Query: 105 DACDRXXXXXXXXXXXXDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 524 + CD+ D+++SRM+ IAPNL+A+VG V A+L+ G L L+K P VQ+LGA+K T + + G + + P + + R LAAK+ LA RVD+ T G R ++ ++ Sbjct: 255 ELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARL 394 The following BLAST results are available for this feature:
BLAST of FC932130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932130 ID=FC932130; Name=FC932130; organism=Citrus clementina; type=EST; length=688bpback to top |