FC932138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6A_SCHPO (40S ribosomal protein S6-A OS=Schizosaccharomyces pombe GN=rps6a PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.644e-30 Identity = 80/176 (45.45%), Postives = 99/176 (56.25%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKK-VSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 525 QGVL P RVRLLL G PC+ CIV DL+VL L I+K+GE D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPKIQRLVTP TL E+ +L+A R+ E +++R A++ S L Sbjct: 65 QGVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRG--CIVGQDLAVLALAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKREVVKARRASSL 237
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 6.065e-30 Identity = 79/173 (45.66%), Postives = 98/173 (56.65%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKV-SKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 516 QGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT PR GPKRAS IRKL+NL+KEDDVR++V +R K GKK +KAPKIQRL+TP+ L EY K+L R +++R RR L+ R Sbjct: 65 QGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRG--CIVDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRLSSMR 233
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6B_SCHPO (40S ribosomal protein S6-B OS=Schizosaccharomyces pombe GN=rps6b PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29 Identity = 79/176 (44.89%), Postives = 99/176 (56.25%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKK-VSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 525 QGVL P RVRLLL G PC+ CIV DL+VL L IVK+GE D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPKIQRLVTP TL E+ +L+A R+ E ++++ A++ S + Sbjct: 65 QGVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRG--CIVGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKKEVVKARRASSM 237
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_AEDAL (40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29 Identity = 79/173 (45.66%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKV-SKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 516 QGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT R GPKRAS IRKL+NL+KEDDVR+YV +R K GKK +KAPKIQRL+TP+ L EY K+L R +++R RR L+ R Sbjct: 65 QGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRG--CIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRLSSMR 233
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_CAEEL (40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 75/173 (43.35%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRS 519 QG+LT GRVRLLL +G C+ CIV ++S L+LVIVKKG+ ++ GLTD+ PR GPKRASKIRKLFNL+K DDV KYV T+ +TF K + APKIQRL+TP + Y KLLA KE+ + + +A++RS Sbjct: 65 QGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRG--CIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTI--APKIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAK---IARRRS 230
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_DEBHA (40S ribosomal protein S6 OS=Debaryomyces hansenii GN=RPS6 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.817e-27 Identity = 75/175 (42.86%), Postives = 97/175 (55.43%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 525 QGV+ P RV+LLL +G C+ CIV+ DL+VL L +VK+G+ D+ GLTDT P+ GPKRA+ IRK F L+KEDDVR++V R K KK +KAPKIQRLVTP TL EY +LLA RL E++ R+E ++ S L Sbjct: 65 QGVMHPTRVKLLLAKGHSCYRPRRTGERKRKSVRG--CIVAQDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV---VRREVVKGDKKYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLAQRLHERKAERAEIKKRRASSL 234
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_YEAST (40S ribosomal protein S6 OS=Saccharomyces cerevisiae GN=RPS6A PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.680e-27 Identity = 77/175 (44.00%), Postives = 94/175 (53.71%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 525 QGVL P R++LLL + C+ IV PDL+VL LVIVKKGE +L GLTDT P+ GPKRA+ IRK F LSKEDDVR +V R TK K +KAPKIQRLVTP L EY +LLA RL E++ ++E ++ S L Sbjct: 65 QGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRG--AIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSL 234
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_CANGA (40S ribosomal protein S6 OS=Candida glabrata GN=RPS6A PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27 Identity = 76/175 (43.43%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 525 QGVL P RV+LLL +G C+ IV PDL+VL+LVIVKKGE +L G+TD P+ GPKRA+ IRK F L+KEDDVR +V R TK K +KAPKIQRLVTP L EY +LLA RL E++ ++E+ ++ S L Sbjct: 65 QGVLLPTRVKLLLAKGHSCYRPRRSGERKRKSVRG--AIVGPDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLAKRLAERKAEKAETRKRRASSL 234
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_KLULA (40S ribosomal protein S6 OS=Kluyveromyces lactis GN=RPS6 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26 Identity = 73/175 (41.71%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 525 QGVL P RV+LLL +G C+ IV PDL+VL L+I KKGE ++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKIQRLVTP L EY +LLA RL E++ ++E ++ S L Sbjct: 65 QGVLLPTRVKLLLAKGHSCYRPRRNGERKRKSVRG--AIVGPDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGDKSYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLAKRLSERKAEKAEVRKRRASSL 234
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_KLUMA (40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25 Identity = 76/172 (44.19%), Postives = 94/172 (54.65%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQ----RERRSESL 504 QGVL P RV+LL+ +GT C+ IV PDL+VL LVIVKKG+ ++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKIQRLVTP L EY +LLA RL E+ R+RR+ SL Sbjct: 65 QGVLLPTRVKLLMAKGTSCYRPRRNGERKRKSVRG--AIVGPDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRQQKALKIKNAQAQREAAAEYAQLLAKRLAERKAEVRKRRASSL 231 The following BLAST results are available for this feature:
BLAST of FC932138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932138 ID=FC932138; Name=FC932138; organism=Citrus clementina; type=EST; length=691bpback to top |